Examples with ObjectNotFoundException org.vcell.util.ObjectNotFoundException used on opensource projects

Example 61 with ObjectNotFoundException

use of org.vcell.util.ObjectNotFoundException in project vcell by virtualcell.

the class MathModelDbDriver method getMathModelMetaData.

/**
 * getModel method comment.
 */
private MathModelMetaData getMathModelMetaData(Connection con, User user, KeyValue mathModelKey) throws SQLException, DataAccessException, ObjectNotFoundException {
    if (user == null || mathModelKey == null) {
        throw new IllegalArgumentException("Improper parameters for getMathModelMetaData");
    }
    if (lg.isTraceEnabled())
        lg.trace("MathModelDbDriver.getMathModelMetaData(user=" + user + ", id=" + mathModelKey + ")");
    // 
    // to construct a MathModelMetaData as an immutable object, lets collect all keys first
    // (even before authentication).  If the user doesn't authenticate, then throw away the
    // child keys (from link tables).
    // 
    // 
    // get Simulation Keys for mathModelKey
    // 
    KeyValue[] simKeys = getSimulationEntriesFromMathModel(con, mathModelKey);
    // 
    // get MathModelMetaData object for mathModelKey
    // 
    String sql;
    Field[] f = { new cbit.sql.StarField(mathModelTable), userTable.userid };
    Table[] t = { mathModelTable, userTable };
    String condition = mathModelTable.id.getQualifiedColName() + " = " + mathModelKey + " AND " + userTable.id.getQualifiedColName() + " = " + mathModelTable.ownerRef.getQualifiedColName();
    sql = DatabasePolicySQL.enforceOwnershipSelect(user, f, t, (OuterJoin) null, condition, null, dbSyntax, true);
    Statement stmt = con.createStatement();
    MathModelMetaData mathModelMetaData = null;
    try {
        ResultSet rset = stmt.executeQuery(sql);
        if (rset.next()) {
            mathModelMetaData = mathModelTable.getMathModelMetaData(rset, con, simKeys, dbSyntax);
        } else {
            throw new ObjectNotFoundException("MathModel id=" + mathModelKey + " not found for user '" + user + "'");
        }
    } finally {
        // Release resources include resultset
        stmt.close();
    }
    return mathModelMetaData;
}

Example 62 with ObjectNotFoundException

use of org.vcell.util.ObjectNotFoundException in project vcell by virtualcell.

the class DBTopLevel method getMathModelXML.

/**
 * This method was created in VisualAge.
 * @return cbit.sql.Versionable
 * @param object cbit.sql.Versionable
 * @param name java.lang.String
 * @param bVersion boolean
 * @exception org.vcell.util.DataAccessException The exception description.
 * @exception java.sql.SQLException The exception description.
 * @exception cbit.sql.RecordChangedException The exception description.
 */
String getMathModelXML(User user, KeyValue key, boolean bEnableRetry) throws DataAccessException, java.sql.SQLException, ObjectNotFoundException {
    Object lock = new Object();
    VersionableType versionableType = VersionableType.MathModelMetaData;
    Connection con = conFactory.getConnection(lock);
    DbDriver driver = getDbDriver(versionableType);
    try {
        // 
        // Getting the corresponding VersionInfo will fail if you don't have permission to the object.
        // This is needed because the DbDriver-level services can return objects directly from the
        // cache without checking for permissions first.
        // 
        // This check is placed in DbTopLevel because this is the client API entry point.
        // Child objects (of the requested object) are given permission by reachablity anyway,
        // so if the user is allowed permission to the parent, no further checks are necessary.
        // 
        Vector<VersionInfo> vInfos = getVersionableInfos(user, key, versionableType, true, true, false);
        if (vInfos.size() == 0) {
            throw new ObjectNotFoundException(versionableType.getTypeName() + " not found");
        }
        return driver.getVersionableXML(con, versionableType, key);
    } catch (Throwable e) {
        lg.error(e.getMessage(), e);
        if (bEnableRetry && isBadConnection(con)) {
            conFactory.failed(con, lock);
            return getMathModelXML(user, key, false);
        } else {
            handle_DataAccessException_SQLException(e);
            // never gets here;
            return null;
        }
    } finally {
        conFactory.release(con, lock);
    }
}