Examples with DefaultFileProcessingChain ca.corefacility.bioinformatics.irida.processing.impl.DefaultFileProcessingChain used on opensource projects

Example 6 with DefaultFileProcessingChain

use of ca.corefacility.bioinformatics.irida.processing.impl.DefaultFileProcessingChain in project irida by phac-nml.

the class DefaultFileProcessingChainTest method testFailOnProcessorChain.

@Test(expected = FileProcessorException.class)
public void testFailOnProcessorChain() throws FileProcessorTimeoutException {
    FileProcessingChain fileProcessingChain = new DefaultFileProcessingChain(objectRepository, qcRepository, new FailingFileProcessorNoContinue());
    when(objectRepository.exists(objectId)).thenReturn(true);
    fileProcessingChain.launchChain(1L);
}