Examples with Condition ca.uhn.fhir.model.dstu2.resource.Condition used on opensource projects

Example 16 with Condition

use of ca.uhn.fhir.model.dstu2.resource.Condition in project eCRNow by drajer-health.

the class Dstu2CdaProblemGenerator method generateProblemSection.

public static String generateProblemSection(Dstu2FhirData data, LaunchDetails details) {
    StringBuilder sb = new StringBuilder(2000);
    List<Condition> conds = data.getConditions();
    if (conds != null && conds.size() > 0) {
        // Generate the component and section end tags
        sb.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.COMP_EL_NAME));
        sb.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.SECTION_EL_NAME));
        sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.PROB_SEC_TEMPLATE_ID));
        sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.PROB_SEC_TEMPLATE_ID, CdaGeneratorConstants.PROB_SEC_TEMPLATE_ID_EXT));
        sb.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.CODE_EL_NAME, CdaGeneratorConstants.PROB_SEC_CODE, CdaGeneratorConstants.LOINC_CODESYSTEM_OID, CdaGeneratorConstants.LOINC_CODESYSTEM_NAME, CdaGeneratorConstants.PROB_SEC_NAME));
        // Add Title
        sb.append(CdaGeneratorUtils.getXmlForText(CdaGeneratorConstants.TITLE_EL_NAME, CdaGeneratorConstants.PROB_SEC_TITLE));
        // Add Narrative Text
        sb.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.TEXT_EL_NAME));
        // Create Table Header.
        List<String> list = new ArrayList<String>();
        list.add(CdaGeneratorConstants.PROB_TABLE_COL_1_TITLE);
        list.add(CdaGeneratorConstants.PROB_TABLE_COL_2_TITLE);
        sb.append(CdaGeneratorUtils.getXmlForTableHeader(list, CdaGeneratorConstants.TABLE_BORDER, CdaGeneratorConstants.TABLE_WIDTH));
        // Add Table Body
        sb.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.TABLE_BODY_EL_NAME));
        // Add Body Rows
        int rowNum = 1;
        for (Condition prob : conds) {
            String probDisplayName = CdaGeneratorConstants.UNKNOWN_VALUE;
            if (prob.getCode() != null && prob.getCode().getCodingFirstRep() != null && !StringUtils.isEmpty(prob.getCode().getCodingFirstRep().getDisplay())) {
                probDisplayName = prob.getCode().getCodingFirstRep().getDisplay();
            }
            Map<String, String> bodyvals = new HashMap<String, String>();
            bodyvals.put(CdaGeneratorConstants.PROB_TABLE_COL_1_BODY_CONTENT, probDisplayName);
            if (prob.getClinicalStatus() != null && (prob.getClinicalStatus().contentEquals(ConditionClinicalStatusCodesEnum.ACTIVE.getCode()) || prob.getClinicalStatus().contentEquals(ConditionClinicalStatusCodesEnum.RELAPSE.getCode()))) {
                bodyvals.put(CdaGeneratorConstants.PROB_TABLE_COL_2_BODY_CONTENT, CdaGeneratorConstants.TABLE_ACTIVE_STATUS);
            } else {
                bodyvals.put(CdaGeneratorConstants.PROB_TABLE_COL_2_BODY_CONTENT, CdaGeneratorConstants.TABLE_RESOLVED_STATUS);
            }
            sb.append(CdaGeneratorUtils.addTableRow(bodyvals, rowNum));
            // TODO: ++rowNum or rowNum++
            ++rowNum;
        }
        sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.TABLE_BODY_EL_NAME));
        // End Table.
        sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.TABLE_EL_NAME));
        sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.TEXT_EL_NAME));
        Boolean triggerCodesAdded = false;
        for (Condition pr : conds) {
            // Add the Entries.
            sb.append(CdaGeneratorUtils.getXmlForActEntry(CdaGeneratorConstants.TYPE_CODE_DEF));
            // Add the problem Concern Act
            sb.append(CdaGeneratorUtils.getXmlForAct(CdaGeneratorConstants.ACT_EL_NAME, CdaGeneratorConstants.ACT_CLASS_CODE, CdaGeneratorConstants.MOOD_CODE_DEF));
            sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.PROB_CONCERN_TEMPLATE_ID));
            sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.PROB_CONCERN_TEMPLATE_ID, CdaGeneratorConstants.PROB_CONCERN_TEMPLATE_ID_EXT));
            sb.append(CdaGeneratorUtils.getXmlForIIUsingGuid());
            sb.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.CODE_EL_NAME, CdaGeneratorConstants.PROB_CONC_ACT_CODE, CdaGeneratorConstants.HL7_ACT_CLASS_OID, CdaGeneratorConstants.HL7_ACT_CLASS_NAME, CdaGeneratorConstants.PROB_CONC_ACT_NAME));
            if (pr.getClinicalStatus() != null && (pr.getClinicalStatus().contentEquals(ConditionClinicalStatusCodesEnum.ACTIVE.getCode()) || pr.getClinicalStatus().contentEquals(ConditionClinicalStatusCodesEnum.RELAPSE.getCode()))) {
                sb.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.STATUS_CODE_EL_NAME, CdaGeneratorConstants.ACTIVE_STATUS));
            } else {
                sb.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.STATUS_CODE_EL_NAME, CdaGeneratorConstants.COMPLETED_STATUS));
            }
            Pair<Date, TimeZone> onset = null;
            Pair<Date, TimeZone> abatement = null;
            Pair<Date, TimeZone> recorded = null;
            if (pr.getOnset() != null && pr.getOnset() instanceof DateTimeDt) {
                DateTimeDt dt = (DateTimeDt) pr.getOnset();
                onset = new Pair<>(dt.getValue(), dt.getTimeZone());
            }
            if (pr.getAbatement() != null && pr.getAbatement() instanceof DateTimeDt) {
                DateTimeDt dt = (DateTimeDt) pr.getAbatement();
                abatement = new Pair<>(dt.getValue(), dt.getTimeZone());
            }
            if (pr.getDateRecordedElement() != null) {
                recorded = new Pair<>(pr.getDateRecorded(), null);
            }
            sb.append(CdaGeneratorUtils.getXmlForIVLWithTS(CdaGeneratorConstants.EFF_TIME_EL_NAME, recorded, abatement, true));
            // Add the Problem Observation
            sb.append(CdaGeneratorUtils.getXmlForEntryRelationship(CdaGeneratorConstants.ENTRY_REL_SUBJ_CODE));
            sb.append(CdaGeneratorUtils.getXmlForAct(CdaGeneratorConstants.OBS_ACT_EL_NAME, CdaGeneratorConstants.OBS_CLASS_CODE, CdaGeneratorConstants.MOOD_CODE_DEF));
            sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.PROB_OBS_TEMPLATE_ID));
            sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.PROB_OBS_TEMPLATE_ID, CdaGeneratorConstants.PROB_OBS_TEMPALTE_ID_EXT));
            sb.append(CdaGeneratorUtils.getXmlForII(details.getAssigningAuthorityId(), pr.getId().getValue()));
            sb.append(CdaGeneratorUtils.getXmlForCDWithoutEndTag(CdaGeneratorConstants.CODE_EL_NAME, CdaGeneratorConstants.DIAGNOSIS_SNOMED, CdaGeneratorConstants.SNOMED_CODESYSTEM_OID, CdaGeneratorConstants.SNOMED_CODESYSTEM_NAME, CdaGeneratorConstants.DIAGNOSIS_DISPLAY_NAME));
            sb.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.TRANSLATION_EL_NAME, CdaGeneratorConstants.DIAGNOSIS_LOINC, CdaGeneratorConstants.LOINC_CODESYSTEM_OID, CdaGeneratorConstants.LOINC_CODESYSTEM_NAME, CdaGeneratorConstants.DIAGNOSIS_DISPLAY_NAME));
            sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.CODE_EL_NAME));
            sb.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.STATUS_CODE_EL_NAME, CdaGeneratorConstants.COMPLETED_STATUS));
            sb.append(CdaGeneratorUtils.getXmlForIVLWithTS(CdaGeneratorConstants.EFF_TIME_EL_NAME, onset, abatement, true));
            List<CodeableConceptDt> cds = new ArrayList<CodeableConceptDt>();
            cds.add(pr.getCode());
            sb.append(Dstu2CdaFhirUtilities.getCodeableConceptXml(cds, CdaGeneratorConstants.VAL_EL_NAME, true));
            // End Tag for Entry Relationship
            sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.OBS_ACT_EL_NAME));
            sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.ENTRY_REL_EL_NAME));
            if (!triggerCodesAdded) {
                sb.append(addTriggerCodes(data, details, pr, onset, abatement));
                triggerCodesAdded = true;
            }
            // End Tags for Entries
            sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.ACT_EL_NAME));
            sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.ENTRY_EL_NAME));
        }
        // Complete the section end tags.
        sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.SECTION_EL_NAME));
        sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.COMP_EL_NAME));
    } else {
        sb.append(generateEmptyProblemSection());
    }
    return sb.toString();
}