Examples with FieldDataIdentifierSpec cbit.vcell.field.FieldDataIdentifierSpec used on opensource projects

Example 26 with FieldDataIdentifierSpec

use of cbit.vcell.field.FieldDataIdentifierSpec in project vcell by virtualcell.

the class SimulationStateMachine method onDispatch.

public synchronized void onDispatch(Simulation simulation, SimulationJobStatus oldSimulationJobStatus, SimulationDatabase simulationDatabase, VCMessageSession session) throws VCMessagingException, DataAccessException, SQLException {
    updateSolverProcessTimestamp();
    VCSimulationIdentifier vcSimID = oldSimulationJobStatus.getVCSimulationIdentifier();
    int taskID = oldSimulationJobStatus.getTaskID();
    if (!oldSimulationJobStatus.getSchedulerStatus().isWaiting()) {
        VCMongoMessage.sendInfo("onDispatch(" + vcSimID.getID() + ") Can't start, simulation[" + vcSimID + "] job [" + jobIndex + "] task [" + taskID + "] is already dispatched (" + oldSimulationJobStatus.getSchedulerStatus().getDescription() + ")");
        throw new RuntimeException("Can't start, simulation[" + vcSimID + "] job [" + jobIndex + "] task [" + taskID + "] is already dispatched (" + oldSimulationJobStatus.getSchedulerStatus().getDescription() + ")");
    }
    FieldDataIdentifierSpec[] fieldDataIdentifierSpecs = simulationDatabase.getFieldDataIdentifierSpecs(simulation);
    SimulationTask simulationTask = new SimulationTask(new SimulationJob(simulation, jobIndex, fieldDataIdentifierSpecs), taskID);
    double requiredMemMB = simulationTask.getEstimatedMemorySizeMB();
    double allowableMemMB = Double.parseDouble(PropertyLoader.getRequiredProperty(PropertyLoader.limitJobMemoryMB));
    final SimulationJobStatus newSimJobStatus;
    if (requiredMemMB > allowableMemMB) {
        // 
        // fail the simulation
        // 
        Date currentDate = new Date();
        // new queue status
        SimulationQueueEntryStatus newQueueStatus = new SimulationQueueEntryStatus(currentDate, PRIORITY_DEFAULT, SimulationJobStatus.SimulationQueueID.QUEUE_ID_NULL);
        SimulationExecutionStatus newSimExeStatus = new SimulationExecutionStatus(null, null, new Date(), null, false, null);
        newSimJobStatus = new SimulationJobStatus(VCellServerID.getSystemServerID(), vcSimID, jobIndex, oldSimulationJobStatus.getSubmitDate(), SchedulerStatus.FAILED, taskID, SimulationMessage.jobFailed("simulation required " + requiredMemMB + "MB of memory, only " + allowableMemMB + "MB allowed"), newQueueStatus, newSimExeStatus);
        simulationDatabase.updateSimulationJobStatus(newSimJobStatus);
        StatusMessage message = new StatusMessage(newSimJobStatus, simulation.getVersion().getOwner().getName(), null, null);
        message.sendToClient(session);
    } else {
        // 
        // dispatch the simulation, new queue status
        // 
        Date currentDate = new Date();
        SimulationQueueEntryStatus newQueueStatus = new SimulationQueueEntryStatus(currentDate, PRIORITY_DEFAULT, SimulationJobStatus.SimulationQueueID.QUEUE_ID_SIMULATIONJOB);
        SimulationExecutionStatus newSimExeStatus = new SimulationExecutionStatus(null, null, new Date(), null, false, null);
        newSimJobStatus = new SimulationJobStatus(VCellServerID.getSystemServerID(), vcSimID, jobIndex, oldSimulationJobStatus.getSubmitDate(), SchedulerStatus.DISPATCHED, taskID, SimulationMessage.MESSAGE_JOB_DISPATCHED, newQueueStatus, newSimExeStatus);
        SimulationTaskMessage simTaskMessage = new SimulationTaskMessage(simulationTask);
        simTaskMessage.sendSimulationTask(session);
        simulationDatabase.updateSimulationJobStatus(newSimJobStatus);
        StatusMessage message = new StatusMessage(newSimJobStatus, simulation.getVersion().getOwner().getName(), null, null);
        message.sendToClient(session);
    }
// addStateMachineTransition(new StateMachineTransition(new DispatchStateMachineEvent(taskID), oldSimulationJobStatus, newSimJobStatus));
}