Examples with Property com.b2international.snowowl.fhir.core.model.codesystem.Property used on opensource projects

Example 6 with Property

use of com.b2international.snowowl.fhir.core.model.codesystem.Property in project snow-owl by b2ihealthcare.

the class PropertySerializationTest method subPropertyTest.

@Test
public void subPropertyTest() throws Exception {
    Property property = Property.builder().code("123").valueInteger(2).description("propertyDescription").addSubProperty(SubProperty.builder().code("subCode").description("subDescription").valueInteger(1).build()).build();
    Fhir fhirParameters = new Parameters.Fhir(property);
    JsonPath jsonPath = JsonPath.from(objectMapper.writeValueAsString(fhirParameters));
    assertThat(jsonPath.getString("resourceType"), equalTo("Parameters"));
    assertThat(jsonPath.getList("parameter").size(), is(4));
    assertThat(jsonPath, FhirParameterMatcher.hasParameter("code", FhirDataType.CODE, "123"));
    assertThat(jsonPath, FhirParameterMatcher.hasParameter("value", FhirDataType.INTEGER, 2));
    assertThat(jsonPath, FhirParameterMatcher.hasParameter("description", FhirDataType.STRING, "propertyDescription"));
    assertThat(jsonPath.getString("parameter[3].name"), equalTo("subproperty"));
    assertThat(jsonPath.getString("parameter[3].part[0].name"), equalTo("code"));
    assertThat(jsonPath.getString("parameter[3].part[0].valueCode"), equalTo("subCode"));
    assertThat(jsonPath.getString("parameter[3].part[1].name"), equalTo("value"));
    assertThat(jsonPath.getInt("parameter[3].part[1].valueInteger"), equalTo(1));
    assertThat(jsonPath.getString("parameter[3].part[2].name"), equalTo("description"));
    assertThat(jsonPath.getString("parameter[3].part[2].valueString"), equalTo("subDescription"));
}

Example 7 with Property

use of com.b2international.snowowl.fhir.core.model.codesystem.Property in project snow-owl by b2ihealthcare.

the class SnomedFhirCodeSystemLookupConverter method expandProperties.

@Override
public List<Property> expandProperties(ServiceProvider context, CodeSystem codeSystem, Concept concept, LookupRequest lookupRequest) {
    SnomedConcept snomedConcept = concept.getInternalConceptAs();
    List<Property> properties = new ArrayList<>();
    // add basic SNOMED properties
    if (lookupRequest.isPropertyRequested(CoreSnomedConceptProperties.INACTIVE)) {
        properties.add(CoreSnomedConceptProperties.INACTIVE.propertyOf(!snomedConcept.isActive()));
    }
    if (lookupRequest.isPropertyRequested(CoreSnomedConceptProperties.MODULE_ID)) {
        properties.add(CoreSnomedConceptProperties.MODULE_ID.propertyOf(snomedConcept.getModuleId()));
    }
    if (lookupRequest.isPropertyRequested(CoreSnomedConceptProperties.SUFFICIENTLY_DEFINED)) {
        properties.add(CoreSnomedConceptProperties.SUFFICIENTLY_DEFINED.propertyOf(!snomedConcept.isPrimitive()));
    }
    if (lookupRequest.isPropertyRequested(CoreSnomedConceptProperties.EFFECTIVE_TIME)) {
        properties.add(CoreSnomedConceptProperties.EFFECTIVE_TIME.propertyOf(EffectiveTimes.format(snomedConcept.getEffectiveTime(), DateFormats.SHORT)));
    }
    // Optionally requested properties
    boolean requestedChild = lookupRequest.containsProperty(CommonConceptProperties.CHILD.getCode());
    boolean requestedParent = lookupRequest.containsProperty(CommonConceptProperties.PARENT.getCode());
    if (requestedChild && snomedConcept.getDescendants() != null) {
        for (SnomedConcept child : snomedConcept.getDescendants()) {
            properties.add(CommonConceptProperties.CHILD.propertyOf(child.getId(), SnomedDisplayTermType.PT.getLabel(child)));
        }
    }
    if (requestedParent && snomedConcept.getAncestors() != null) {
        for (SnomedConcept parent : snomedConcept.getAncestors()) {
            properties.add(CommonConceptProperties.PARENT.propertyOf(parent.getId(), SnomedDisplayTermType.PT.getLabel(parent)));
        }
    }
    // Relationship Properties
    Set<String> relationshipTypeIds = lookupRequest.getPropertyCodes().stream().map(p -> {
        if (p.startsWith(SnomedTerminologyComponentConstants.SNOMED_URI_BASE)) {
            // URI prefixed properties
            return p.substring(p.lastIndexOf('/') + 1, p.length());
        } else {
            // use as is, so users won't need to define full URI for each SNOMED CT property, ID is enough
            return p;
        }
    }).filter(// only SNOMED CT Concept IDs
    SnomedIdentifiers::isConceptIdentifier).collect(Collectors.toSet());
    if (!relationshipTypeIds.isEmpty()) {
        SnomedRequests.prepareSearchRelationship().all().filterByActive(true).filterByCharacteristicType(Concepts.INFERRED_RELATIONSHIP).filterBySource(concept.getId()).filterByTypes(relationshipTypeIds).build(codeSystem.getResourceURI()).getRequest().execute(context).forEach(r -> {
            Property.Builder propertyBuilder = Property.builder().code(r.getTypeId());
            if (r.hasValue()) {
                RelationshipValue value = r.getValueAsObject();
                value.map(i -> propertyBuilder.valueInteger(i), d -> propertyBuilder.valueDecimal(d.doubleValue()), s -> propertyBuilder.valueString(s));
            } else {
                propertyBuilder.valueCode(r.getDestinationId());
            }
            properties.add(propertyBuilder.build());
        });
    }
    if (properties.isEmpty()) {
        return null;
    } else {
        return properties;
    }
}