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Example 86 with Name

use of com.epri._2016.cimidentities_.Name in project ORCID-Source by ORCID.

the class PublicAPISecurityManagerV2Test method getPersonElement.

private Person getPersonElement() {
    Visibility[] vs = { Visibility.PUBLIC, Visibility.PUBLIC, Visibility.PUBLIC };
    Person p = new Person();
    p.setAddresses(getAddressesElement(vs));
    p.setEmails(getEmailsElement(vs));
    p.setExternalIdentifiers(getPersonExternalIdentifiersElement(vs));
    p.setKeywords(getKeywordsElement(vs));
    p.setOtherNames(getOtherNamesElement(vs));
    p.setResearcherUrls(getResearcherUrlsElement(vs));
    Name name = new Name();
    name.setVisibility(Visibility.PUBLIC);
    p.setName(name);
    Biography b = new Biography();
    b.setVisibility(Visibility.PUBLIC);
    b.setContent("Biography test");
    p.setBiography(b);
    return p;
}
Also used : Biography(org.orcid.jaxb.model.record_v2.Biography) Visibility(org.orcid.jaxb.model.common_v2.Visibility) Person(org.orcid.jaxb.model.record_v2.Person) OtherName(org.orcid.jaxb.model.record_v2.OtherName) Name(org.orcid.jaxb.model.record_v2.Name)

Example 87 with Name

use of com.epri._2016.cimidentities_.Name in project ORCID-Source by ORCID.

the class PublicAPISecurityManagerV2Test method getPersonalDetailsElement.

private PersonalDetails getPersonalDetailsElement(Visibility nameVisibility, Visibility bioVisiblity, Visibility otherNamesVisibility) {
    PersonalDetails p = new PersonalDetails();
    Name name = new Name();
    name.setVisibility(nameVisibility);
    p.setName(name);
    Biography bio = new Biography();
    bio.setVisibility(bioVisiblity);
    bio.setContent("Bio test");
    p.setBiography(bio);
    p.setOtherNames(getOtherNamesElement(otherNamesVisibility));
    return p;
}
Also used : Biography(org.orcid.jaxb.model.record_v2.Biography) PersonalDetails(org.orcid.jaxb.model.record_v2.PersonalDetails) OtherName(org.orcid.jaxb.model.record_v2.OtherName) Name(org.orcid.jaxb.model.record_v2.Name)

Example 88 with Name

use of com.epri._2016.cimidentities_.Name in project ORCID-Source by ORCID.

the class SetUpClientsAndUsers method clearRegistry.

private boolean clearRegistry(OrcidProfile existingProfile, Map<String, String> params) {
    if (existingProfile != null) {
        String orcid = params.get(ORCID);
        String email = params.get(EMAIL);
        // exception
        if (existingProfile.getOrcidBio() == null || existingProfile.getOrcidBio().getContactDetails() == null || existingProfile.getOrcidBio().getContactDetails().retrievePrimaryEmail() == null || !email.equals(existingProfile.getOrcidBio().getContactDetails().retrievePrimaryEmail().getValue())) {
            throw new ApplicationException("User with email " + params.get(EMAIL) + " must have orcid id '" + orcid + "' but it is '" + existingProfile.getOrcidId() + "'");
        }
        // Check if the profile have the same password, if not, update the
        // password
        String encryptedPassword = encryptionManager.hashForInternalUse(params.get(PASSWORD));
        if (!encryptedPassword.equals(existingProfile.getPassword())) {
            existingProfile.setPassword(params.get(PASSWORD));
            orcidProfileManager.updatePasswordInformation(existingProfile);
        }
        // Set default names
        Name name = new Name();
        name.setCreditName(new CreditName(params.get(CREDIT_NAME)));
        name.setGivenNames(new GivenNames(params.get(GIVEN_NAMES)));
        name.setFamilyName(new FamilyName(params.get(FAMILY_NAMES)));
        name.setVisibility(org.orcid.jaxb.model.common_v2.Visibility.fromValue(OrcidVisibilityDefaults.NAMES_DEFAULT.getVisibility().value()));
        if (recordNameManager.exists(orcid)) {
            recordNameManager.updateRecordName(orcid, name);
        } else {
            recordNameManager.createRecordName(orcid, name);
        }
        profileDao.updatePreferences(orcid, true, true, true, true, org.orcid.jaxb.model.common_v2.Visibility.PUBLIC, true, 1f);
        // Set default bio
        org.orcid.jaxb.model.record_v2.Biography bio = biographyManager.getBiography(orcid);
        if (bio == null || bio.getContent() == null) {
            bio = new org.orcid.jaxb.model.record_v2.Biography(params.get(BIO));
            bio.setVisibility(org.orcid.jaxb.model.common_v2.Visibility.fromValue(OrcidVisibilityDefaults.BIOGRAPHY_DEFAULT.getVisibility().value()));
            biographyManager.createBiography(orcid, bio);
        } else {
            bio.setContent(params.get(BIO));
            bio.setVisibility(org.orcid.jaxb.model.common_v2.Visibility.fromValue(OrcidVisibilityDefaults.BIOGRAPHY_DEFAULT.getVisibility().value()));
            biographyManager.updateBiography(orcid, bio);
        }
        // Remove other names
        List<OtherNameEntity> otherNames = otherNameDao.getOtherNames(orcid, 0L);
        if (otherNames != null && !otherNames.isEmpty()) {
            for (OtherNameEntity otherName : otherNames) {
                otherNameDao.deleteOtherName(otherName);
            }
        }
        // Remove keywords
        List<ProfileKeywordEntity> keywords = profileKeywordDao.getProfileKeywords(orcid, 0L);
        if (keywords != null && !keywords.isEmpty()) {
            for (ProfileKeywordEntity keyword : keywords) {
                profileKeywordDao.deleteProfileKeyword(keyword);
            }
        }
        // Remove researcher urls
        List<ResearcherUrlEntity> rUrls = researcherUrlDao.getResearcherUrls(orcid, 0L);
        if (rUrls != null && !rUrls.isEmpty()) {
            for (ResearcherUrlEntity rUrl : rUrls) {
                researcherUrlDao.deleteResearcherUrl(orcid, rUrl.getId());
            }
        }
        // Remove external ids
        List<ExternalIdentifierEntity> extIds = externalIdentifierDao.getExternalIdentifiers(orcid, System.currentTimeMillis());
        if (extIds != null && !extIds.isEmpty()) {
            for (ExternalIdentifierEntity extId : extIds) {
                externalIdentifierDao.removeExternalIdentifier(orcid, extId.getId());
            }
        }
        // Remove addresses
        List<AddressEntity> addresses = addressDao.getAddresses(orcid, 0L);
        if (addresses != null && !addresses.isEmpty()) {
            for (AddressEntity address : addresses) {
                addressDao.deleteAddress(orcid, address.getId());
            }
        }
        // Remove emails
        List<EmailEntity> emails = emailDao.findByOrcid(orcid, profileEntityManager.getLastModified(orcid));
        if (emails != null && !emails.isEmpty()) {
            for (EmailEntity rc2Email : emails) {
                if (!params.get(EMAIL).equals(rc2Email.getId())) {
                    emailDao.removeEmail(orcid, rc2Email.getId());
                }
            }
        }
        // Remove notifications
        List<NotificationEntity> notifications = notificationDao.findByOrcid(orcid, true, 0, 10000);
        if (notifications != null && !notifications.isEmpty()) {
            for (NotificationEntity notification : notifications) {
                notificationDao.deleteNotificationItemByNotificationId(notification.getId());
                notificationDao.deleteNotificationWorkByNotificationId(notification.getId());
                notificationDao.deleteNotificationById(notification.getId());
            }
        }
        // Remove works
        List<WorkLastModifiedEntity> works = workDao.getWorkLastModifiedList(orcid);
        if (works != null && !works.isEmpty()) {
            for (WorkLastModifiedEntity work : works) {
                workDao.removeWork(orcid, work.getId());
            }
        }
        // Remove affiliations
        List<OrgAffiliationRelationEntity> affiliations = orgAffiliationRelationDao.getByUser(orcid);
        if (affiliations != null && !affiliations.isEmpty()) {
            for (OrgAffiliationRelationEntity affiliation : affiliations) {
                orgAffiliationRelationDao.remove(affiliation.getId());
            }
        }
        // Remove fundings
        List<ProfileFundingEntity> fundings = profileFundingDao.getByUser(orcid, profileEntityManager.getLastModified(orcid));
        if (fundings != null && !fundings.isEmpty()) {
            for (ProfileFundingEntity funding : fundings) {
                profileFundingDao.removeProfileFunding(orcid, funding.getId());
            }
        }
        // Remove peer reviews
        List<PeerReviewEntity> peerReviews = peerReviewDao.getByUser(orcid, profileEntityManager.getLastModified(orcid));
        if (peerReviews != null && !peerReviews.isEmpty()) {
            for (PeerReviewEntity peerReview : peerReviews) {
                peerReviewDao.removePeerReview(orcid, peerReview.getId());
            }
        }
        // Remove 3d party links
        List<OrcidOauth2TokenDetail> tokenDetails = orcidOauth2TokenDetailDao.findByUserName(orcid);
        if (tokenDetails != null && !tokenDetails.isEmpty()) {
            for (OrcidOauth2TokenDetail token : tokenDetails) {
                orcidOauth2TokenDetailDao.remove(token.getId());
            }
        }
        // Unlock just in case it is locked
        profileDao.unlockProfile(orcid);
        return true;
    }
    return false;
}
Also used : ProfileKeywordEntity(org.orcid.persistence.jpa.entities.ProfileKeywordEntity) FamilyName(org.orcid.jaxb.model.record_v2.FamilyName) ExternalIdentifierEntity(org.orcid.persistence.jpa.entities.ExternalIdentifierEntity) FamilyName(org.orcid.jaxb.model.record_v2.FamilyName) CreditName(org.orcid.jaxb.model.common_v2.CreditName) Name(org.orcid.jaxb.model.record_v2.Name) ProfileFundingEntity(org.orcid.persistence.jpa.entities.ProfileFundingEntity) WorkLastModifiedEntity(org.orcid.persistence.jpa.entities.WorkLastModifiedEntity) GivenNames(org.orcid.jaxb.model.record_v2.GivenNames) PeerReviewEntity(org.orcid.persistence.jpa.entities.PeerReviewEntity) NotificationEntity(org.orcid.persistence.jpa.entities.NotificationEntity) AddressEntity(org.orcid.persistence.jpa.entities.AddressEntity) OrcidOauth2TokenDetail(org.orcid.persistence.jpa.entities.OrcidOauth2TokenDetail) ResearcherUrlEntity(org.orcid.persistence.jpa.entities.ResearcherUrlEntity) CreditName(org.orcid.jaxb.model.common_v2.CreditName) EmailEntity(org.orcid.persistence.jpa.entities.EmailEntity) ApplicationException(org.orcid.core.exception.ApplicationException) OtherNameEntity(org.orcid.persistence.jpa.entities.OtherNameEntity) OrgAffiliationRelationEntity(org.orcid.persistence.jpa.entities.OrgAffiliationRelationEntity)

Example 89 with Name

use of com.epri._2016.cimidentities_.Name in project ORCID-Source by ORCID.

the class PersonDetailsManagerReadOnlyImpl method getPublicPersonDetails.

@Override
public Person getPublicPersonDetails(String orcid) {
    Person person = new Person();
    Name name = recordNameManager.getRecordName(orcid);
    if (Visibility.PUBLIC.equals(name.getVisibility())) {
        person.setName(name);
    }
    Biography bio = biographyManager.getPublicBiography(orcid);
    if (bio != null) {
        person.setBiography(bio);
    }
    Addresses addresses = addressManager.getPublicAddresses(orcid);
    if (addresses.getAddress() != null) {
        Addresses filteredAddresses = new Addresses();
        filteredAddresses.setAddress(new ArrayList<Address>(addresses.getAddress()));
        person.setAddresses(filteredAddresses);
    }
    PersonExternalIdentifiers extIds = externalIdentifierManager.getPublicExternalIdentifiers(orcid);
    if (extIds.getExternalIdentifiers() != null) {
        PersonExternalIdentifiers filteredExtIds = new PersonExternalIdentifiers();
        filteredExtIds.setExternalIdentifiers(new ArrayList<PersonExternalIdentifier>(extIds.getExternalIdentifiers()));
        person.setExternalIdentifiers(filteredExtIds);
    }
    Keywords keywords = profileKeywordManager.getPublicKeywords(orcid);
    if (keywords.getKeywords() != null) {
        Keywords filteredKeywords = new Keywords();
        filteredKeywords.setKeywords(new ArrayList<Keyword>(keywords.getKeywords()));
        person.setKeywords(filteredKeywords);
    }
    OtherNames otherNames = otherNameManager.getPublicOtherNames(orcid);
    if (otherNames.getOtherNames() != null) {
        OtherNames filteredOtherNames = new OtherNames();
        filteredOtherNames.setOtherNames(new ArrayList<OtherName>(otherNames.getOtherNames()));
        person.setOtherNames(filteredOtherNames);
    }
    ResearcherUrls rUrls = researcherUrlManager.getPublicResearcherUrls(orcid);
    if (rUrls.getResearcherUrls() != null) {
        ResearcherUrls filteredRUrls = new ResearcherUrls();
        filteredRUrls.setResearcherUrls(new ArrayList<ResearcherUrl>(rUrls.getResearcherUrls()));
        person.setResearcherUrls(filteredRUrls);
    }
    Emails emails = emailManager.getPublicEmails(orcid);
    if (emails.getEmails() != null) {
        Emails filteredEmails = new Emails();
        filteredEmails.setEmails(new ArrayList<Email>(emails.getEmails()));
        person.setEmails(filteredEmails);
    }
    return person;
}
Also used : Keywords(org.orcid.jaxb.model.record_v2.Keywords) Email(org.orcid.jaxb.model.record_v2.Email) Address(org.orcid.jaxb.model.record_v2.Address) Keyword(org.orcid.jaxb.model.record_v2.Keyword) OtherNames(org.orcid.jaxb.model.record_v2.OtherNames) OtherName(org.orcid.jaxb.model.record_v2.OtherName) PersonExternalIdentifier(org.orcid.jaxb.model.record_v2.PersonExternalIdentifier) OtherName(org.orcid.jaxb.model.record_v2.OtherName) Name(org.orcid.jaxb.model.record_v2.Name) Addresses(org.orcid.jaxb.model.record_v2.Addresses) PersonExternalIdentifiers(org.orcid.jaxb.model.record_v2.PersonExternalIdentifiers) Biography(org.orcid.jaxb.model.record_v2.Biography) ResearcherUrls(org.orcid.jaxb.model.record_v2.ResearcherUrls) ResearcherUrl(org.orcid.jaxb.model.record_v2.ResearcherUrl) Emails(org.orcid.jaxb.model.record_v2.Emails) Person(org.orcid.jaxb.model.record_v2.Person)

Example 90 with Name

use of com.epri._2016.cimidentities_.Name in project ORCID-Source by ORCID.

the class PersonalDetailsManagerReadOnlyImpl method getPersonalDetails.

@Override
public PersonalDetails getPersonalDetails(String orcid) {
    Date lastModified = getLastModifiedDate(orcid);
    long lastModifiedTime = lastModified.getTime();
    PersonalDetails personalDetails = new PersonalDetails();
    Name name = recordNameManager.getRecordName(orcid);
    if (name != null) {
        personalDetails.setName(name);
    }
    Biography bio = biographyManager.getBiography(orcid);
    if (bio != null) {
        personalDetails.setBiography(bio);
    }
    OtherNames otherNames = otherNameManager.getOtherNames(orcid);
    OtherNames filteredOtherNames = new OtherNames();
    personalDetails.setOtherNames(filteredOtherNames);
    if (otherNames != null && otherNames.getOtherNames() != null && !otherNames.getOtherNames().isEmpty()) {
        // Lets copy the list so we don't modify the cached collection
        List<OtherName> filteredList = new ArrayList<OtherName>(otherNames.getOtherNames());
        filteredOtherNames.setOtherNames(filteredList);
    }
    if (personalDetails.getLastModifiedDate() == null || personalDetails.getLastModifiedDate().getValue() == null) {
        personalDetails.setLastModifiedDate(new LastModifiedDate(DateUtils.convertToXMLGregorianCalendar(lastModified)));
    }
    return personalDetails;
}
Also used : LastModifiedDate(org.orcid.jaxb.model.common_v2.LastModifiedDate) OtherNames(org.orcid.jaxb.model.record_v2.OtherNames) Biography(org.orcid.jaxb.model.record_v2.Biography) OtherName(org.orcid.jaxb.model.record_v2.OtherName) ArrayList(java.util.ArrayList) PersonalDetails(org.orcid.jaxb.model.record_v2.PersonalDetails) Date(java.util.Date) LastModifiedDate(org.orcid.jaxb.model.common_v2.LastModifiedDate) OtherName(org.orcid.jaxb.model.record_v2.OtherName) Name(org.orcid.jaxb.model.record_v2.Name)

Aggregations

Test (org.junit.Test)77 Name (org.orcid.jaxb.model.record_v2.Name)74 OtherName (org.orcid.jaxb.model.record_v2.OtherName)62 Biography (org.orcid.jaxb.model.record_v2.Biography)46 OtherNames (org.orcid.jaxb.model.record_v2.OtherNames)41 Address (org.orcid.jaxb.model.record_v2.Address)31 Email (org.orcid.jaxb.model.record_v2.Email)30 ResearcherUrl (org.orcid.jaxb.model.record_v2.ResearcherUrl)30 Addresses (org.orcid.jaxb.model.record_v2.Addresses)29 Emails (org.orcid.jaxb.model.record_v2.Emails)29 Keyword (org.orcid.jaxb.model.record_v2.Keyword)29 PersonExternalIdentifier (org.orcid.jaxb.model.record_v2.PersonExternalIdentifier)29 ResearcherUrls (org.orcid.jaxb.model.record_v2.ResearcherUrls)29 Keywords (org.orcid.jaxb.model.record_v2.Keywords)28 Person (org.orcid.jaxb.model.record_v2.Person)28 PersonExternalIdentifiers (org.orcid.jaxb.model.record_v2.PersonExternalIdentifiers)28 Record (org.orcid.jaxb.model.record_v2.Record)19 WorkSummary (org.orcid.jaxb.model.record.summary_v2.WorkSummary)18 EducationSummary (org.orcid.jaxb.model.record.summary_v2.EducationSummary)17 EmploymentSummary (org.orcid.jaxb.model.record.summary_v2.EmploymentSummary)17