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Example 11 with IMultipartBody

use of com.ibm.websphere.jaxrs20.multipart.IMultipartBody in project quality-measure-and-cohort-service by Alvearie.

the class CohortEngineRestHandlerTest method getFhirConfigFileBody.

private IMultipartBody getFhirConfigFileBody() throws Exception {
    // Create the metadata part of the request
    ObjectMapper om = new ObjectMapper();
    String json = om.writeValueAsString(getFhirServerConfig());
    ByteArrayInputStream jsonIs = new ByteArrayInputStream(json.getBytes());
    IAttachment rootPart = mockAttachment(jsonIs);
    // Assemble them together into a reasonable facsimile of the real request
    IMultipartBody body = mock(IMultipartBody.class);
    when(body.getAttachment(CohortEngineRestHandler.FHIR_DATA_SERVER_CONFIG_PART)).thenReturn(rootPart);
    return body;
}
Also used : IMultipartBody(com.ibm.websphere.jaxrs20.multipart.IMultipartBody) ByteArrayInputStream(java.io.ByteArrayInputStream) IAttachment(com.ibm.websphere.jaxrs20.multipart.IAttachment) ObjectMapper(com.fasterxml.jackson.databind.ObjectMapper)

Example 12 with IMultipartBody

use of com.ibm.websphere.jaxrs20.multipart.IMultipartBody in project quality-measure-and-cohort-service by Alvearie.

the class CohortEngineRestHandlerTest method testLoadValueSets.

@PrepareForTest({ Response.class, ValueSetUtil.class })
@Test
public void testLoadValueSets() throws Exception {
    prepMocks();
    mockResponseClasses();
    PowerMockito.mockStatic(ValueSetUtil.class);
    PowerMockito.whenNew(DefaultFhirClientBuilder.class).withArguments(Mockito.any()).thenReturn(mockDefaultFhirClientBuilder);
    PowerMockito.when(ValueSetUtil.importArtifact(ArgumentMatchers.any(), ArgumentMatchers.any(), ArgumentMatchers.eq(false))).thenReturn("ID");
    File tempFile = new File(VALUE_SET_INPUT);
    IAttachment spreadsheetPart = PowerMockito.mock(IAttachment.class);
    DataHandler dataHandler = PowerMockito.mock(DataHandler.class);
    when(spreadsheetPart.getDataHandler()).thenReturn(dataHandler);
    when(dataHandler.getInputStream()).thenReturn(new ByteArrayInputStream(Files.readAllBytes(Paths.get(tempFile.getAbsolutePath()))));
    IMultipartBody body = getFhirConfigFileBody();
    when(body.getAttachment(CohortEngineRestHandler.VALUE_SET_PART)).thenReturn(spreadsheetPart);
    Response loadResponse = restHandler.createValueSet(VERSION, body, false);
    assertNotNull(loadResponse);
    PowerMockito.verifyStatic(Response.class);
    Response.status(Status.CREATED);
}
Also used : Response(javax.ws.rs.core.Response) IMultipartBody(com.ibm.websphere.jaxrs20.multipart.IMultipartBody) ByteArrayInputStream(java.io.ByteArrayInputStream) DataHandler(javax.activation.DataHandler) IAttachment(com.ibm.websphere.jaxrs20.multipart.IAttachment) File(java.io.File) PrepareForTest(org.powermock.core.classloader.annotations.PrepareForTest) Test(org.junit.Test) PrepareForTest(org.powermock.core.classloader.annotations.PrepareForTest)

Example 13 with IMultipartBody

use of com.ibm.websphere.jaxrs20.multipart.IMultipartBody in project quality-measure-and-cohort-service by Alvearie.

the class CohortEngineRestHandlerTest method testEvaluatePatientListMeasure_null_measure_part.

@PrepareForTest({ Response.class, TenantManager.class, ServiceBaseUtility.class })
@Test
public void testEvaluatePatientListMeasure_null_measure_part() {
    prepMocks();
    PowerMockito.mockStatic(ServiceBaseUtility.class);
    PowerMockito.when(ServiceBaseUtility.apiSetup(VERSION, logger, MethodNames.EVALUATE_PATIENT_LIST_MEASURE.getName())).thenReturn(null);
    mockResponseClasses();
    IMultipartBody body = mock(IMultipartBody.class);
    when(body.getAttachment(CohortEngineRestHandler.REQUEST_DATA_PART)).thenReturn(mock(IAttachment.class));
    when(body.getAttachment(CohortEngineRestHandler.MEASURE_PART)).thenReturn(null);
    restHandler.evaluatePatientListMeasure(mockRequestContext, VERSION, body);
    PowerMockito.verifyStatic(Response.class);
    Response.status(400);
}
Also used : IMultipartBody(com.ibm.websphere.jaxrs20.multipart.IMultipartBody) IAttachment(com.ibm.websphere.jaxrs20.multipart.IAttachment) PrepareForTest(org.powermock.core.classloader.annotations.PrepareForTest) Test(org.junit.Test) PrepareForTest(org.powermock.core.classloader.annotations.PrepareForTest)

Example 14 with IMultipartBody

use of com.ibm.websphere.jaxrs20.multipart.IMultipartBody in project quality-measure-and-cohort-service by Alvearie.

the class CohortEngineRestHandlerTest method testCohortBadVersion.

@PrepareForTest({ Response.class, FHIRRestUtils.class })
@Test
public void testCohortBadVersion() throws Exception {
    prepMocks();
    mockResponseClasses();
    // Assemble them together into a reasonable facsimile of the real request
    IMultipartBody body = getFhirConfigFileBody();
    Response loadResponse = restHandler.evaluateCohort(mockRequestContext, "bad-version", body);
    assertNotNull(loadResponse);
    PowerMockito.verifyStatic(Response.class);
    Response.status(400);
    PowerMockito.verifyStatic(ServiceBaseUtility.class);
    ServiceBaseUtility.apiSetup(Mockito.anyString(), Mockito.any(), Mockito.anyString());
    // verifyStatic must be called before each verification
    PowerMockito.verifyStatic(ServiceBaseUtility.class);
    ServiceBaseUtility.apiCleanup(Mockito.any(), Mockito.eq(MethodNames.EVALUATE_COHORT.getName()));
}
Also used : Response(javax.ws.rs.core.Response) IMultipartBody(com.ibm.websphere.jaxrs20.multipart.IMultipartBody) PrepareForTest(org.powermock.core.classloader.annotations.PrepareForTest) Test(org.junit.Test) PrepareForTest(org.powermock.core.classloader.annotations.PrepareForTest)

Example 15 with IMultipartBody

use of com.ibm.websphere.jaxrs20.multipart.IMultipartBody in project quality-measure-and-cohort-service by Alvearie.

the class CohortEngineRestHandlerTest method testEvaluateMeasureSuccess.

/**
 * Test the successful building of a response.
 */
@PrepareForTest({ Response.class, TenantManager.class, ServiceBaseUtility.class })
@Test
public void testEvaluateMeasureSuccess() throws Exception {
    prepMocks();
    PowerMockito.mockStatic(ServiceBaseUtility.class);
    PowerMockito.when(ServiceBaseUtility.apiSetup(VERSION, logger, MethodNames.EVALUATE_MEASURE.getName())).thenReturn(null);
    mockResponseClasses();
    Library library = TestHelper.getTemplateLibrary();
    Measure measure = TestHelper.getTemplateMeasure(library);
    Patient patient = getPatient("patientId", AdministrativeGender.MALE, 40);
    mockFhirResourceRetrieval("/metadata?_format=json", getCapabilityStatement());
    mockFhirResourceRetrieval(patient);
    FhirServerConfig clientConfig = getFhirServerConfig();
    Map<String, Parameter> parameterOverrides = new HashMap<>();
    parameterOverrides.put("Measurement Period", new IntervalParameter(new DateParameter("2019-07-04"), true, new DateParameter("2020-07-04"), true));
    MeasureContext measureContext = new MeasureContext(measure.getId(), parameterOverrides);
    MeasureEvaluation evaluationRequest = new MeasureEvaluation();
    evaluationRequest.setDataServerConfig(clientConfig);
    evaluationRequest.setPatientId(patient.getId());
    evaluationRequest.setMeasureContext(measureContext);
    // evaluationRequest.setEvidenceOptions(evidenceOptions);
    evaluationRequest.setExpandValueSets(true);
    evaluationRequest.setSearchPageSize(500);
    FhirContext fhirContext = FhirContext.forR4();
    IParser parser = fhirContext.newJsonParser().setPrettyPrint(true);
    // Create the metadata part of the request
    ObjectMapper om = new ObjectMapper();
    String json = om.writeValueAsString(evaluationRequest);
    ByteArrayInputStream jsonIs = new ByteArrayInputStream(json.getBytes());
    IAttachment rootPart = mockAttachment(jsonIs);
    // Create the ZIP part of the request
    ByteArrayOutputStream baos = new ByteArrayOutputStream();
    TestHelper.createMeasureArtifact(baos, parser, measure, library);
    ByteArrayInputStream zipIs = new ByteArrayInputStream(baos.toByteArray());
    IAttachment measurePart = mockAttachment(zipIs);
    // Assemble them together into a reasonable facsimile of the real request
    IMultipartBody body = mock(IMultipartBody.class);
    when(body.getAttachment(CohortEngineRestHandler.REQUEST_DATA_PART)).thenReturn(rootPart);
    when(body.getAttachment(CohortEngineRestHandler.MEASURE_PART)).thenReturn(measurePart);
    Response loadResponse = restHandler.evaluateMeasure(mockRequestContext, VERSION, body);
    assertEquals(mockResponse, loadResponse);
    PowerMockito.verifyStatic(Response.class);
    Response.status(Response.Status.OK);
}
Also used : FhirContext(ca.uhn.fhir.context.FhirContext) HashMap(java.util.HashMap) MeasureEvaluation(com.ibm.cohort.engine.api.service.model.MeasureEvaluation) PatientListMeasureEvaluation(com.ibm.cohort.engine.api.service.model.PatientListMeasureEvaluation) Patient(org.hl7.fhir.r4.model.Patient) ByteArrayOutputStream(java.io.ByteArrayOutputStream) IAttachment(com.ibm.websphere.jaxrs20.multipart.IAttachment) Response(javax.ws.rs.core.Response) MeasureContext(com.ibm.cohort.engine.measure.MeasureContext) IMultipartBody(com.ibm.websphere.jaxrs20.multipart.IMultipartBody) DateParameter(com.ibm.cohort.cql.evaluation.parameters.DateParameter) ByteArrayInputStream(java.io.ByteArrayInputStream) Measure(org.hl7.fhir.r4.model.Measure) DateParameter(com.ibm.cohort.cql.evaluation.parameters.DateParameter) Parameter(com.ibm.cohort.cql.evaluation.parameters.Parameter) IntervalParameter(com.ibm.cohort.cql.evaluation.parameters.IntervalParameter) FhirServerConfig(com.ibm.cohort.fhir.client.config.FhirServerConfig) Library(org.hl7.fhir.r4.model.Library) IntervalParameter(com.ibm.cohort.cql.evaluation.parameters.IntervalParameter) ObjectMapper(com.fasterxml.jackson.databind.ObjectMapper) IParser(ca.uhn.fhir.parser.IParser) PrepareForTest(org.powermock.core.classloader.annotations.PrepareForTest) Test(org.junit.Test) PrepareForTest(org.powermock.core.classloader.annotations.PrepareForTest)

Aggregations

IAttachment (com.ibm.websphere.jaxrs20.multipart.IAttachment)25 Response (javax.ws.rs.core.Response)23 IMultipartBody (com.ibm.websphere.jaxrs20.multipart.IMultipartBody)20 ObjectMapper (com.fasterxml.jackson.databind.ObjectMapper)19 Test (org.junit.Test)18 PrepareForTest (org.powermock.core.classloader.annotations.PrepareForTest)18 ByteArrayInputStream (java.io.ByteArrayInputStream)16 FhirServerConfig (com.ibm.cohort.fhir.client.config.FhirServerConfig)15 ByteArrayOutputStream (java.io.ByteArrayOutputStream)9 Patient (org.hl7.fhir.r4.model.Patient)9 PatientListMeasureEvaluation (com.ibm.cohort.engine.api.service.model.PatientListMeasureEvaluation)8 FhirContext (ca.uhn.fhir.context.FhirContext)7 IParser (ca.uhn.fhir.parser.IParser)7 ApiImplicitParams (io.swagger.annotations.ApiImplicitParams)7 ApiOperation (io.swagger.annotations.ApiOperation)7 ApiResponse (io.swagger.annotations.ApiResponse)7 ApiResponses (io.swagger.annotations.ApiResponses)7 Consumes (javax.ws.rs.Consumes)7 POST (javax.ws.rs.POST)7 Path (javax.ws.rs.Path)7