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Example 6 with SkosBean

use of com.localidata.bean.SkosBean in project local-data-aragopedia by aragonopendata.

the class GenerateConfig method extractSkosConcept.

private void extractSkosConcept(List<String> csvLines, ArrayList<DataBean> skosData, ConfigBean configBean) {
    log.debug("Init extractSkosConcept");
    String headerLine = Utils.weakClean(csvLines.get(0));
    String[] cells = headerLine.split("\t");
    int[] posColumn = new int[skosData.size()];
    for (int h = 0; h < skosData.size(); h++) {
        String name = skosData.get(h).getName();
        for (int i = 0; i < cells.length; i++) {
            if (cells[i].equalsIgnoreCase(name)) {
                boolean incluido = false;
                for (int j = 0; j < posColumn.length; j++) {
                    if (posColumn[j] == i)
                        incluido = true;
                }
                if (!incluido) {
                    posColumn[h] = i;
                    break;
                }
            }
        }
    }
    for (int h = 1; h < csvLines.size(); h++) {
        String line = Utils.weakClean(csvLines.get(h));
        if (Utils.v(line)) {
            cells = line.split("\t");
            for (int i = 0; i < skosData.size(); i++) {
                try {
                    if (cells.length > posColumn[i]) {
                        String cell = cells[posColumn[i]];
                        SkosBean skosBean = new SkosBean();
                        String skosUrified = Utils.urlify(cell);
                        skosBean.setId(skosUrified);
                        skosBean.setLabel(Utils.weakClean(cell));
                        skosBean.setURI(Prop.host + "/kos/" + Prop.datasetName + "/" + Utils.urlify(skosData.get(i).getName()) + "/" + skosUrified);
                        DataBean dataBean = null;
                        if (skosExtrated.get(skosData.get(i).getName()) != null) {
                            dataBean = skosExtrated.get(skosData.get(i).getName());
                        } else {
                            dataBean = skosData.get(i);
                        }
                        if (dataBean.getMapSkos().get(skosBean.getId()) == null) {
                            dataBean.getMapSkos().put(skosBean.getId(), skosBean);
                            skosExtrated.put(dataBean.getName(), dataBean);
                            if (configBean != null)
                                configBean.getMapData().put(dataBean.getName(), dataBean);
                        }
                    }
                } catch (ArrayIndexOutOfBoundsException e) {
                    log.error("ERROR al extraer los skos debido a incoherencia de columnas", e);
                    DataBean dataBean = null;
                    if (skosExtrated.get(skosData.get(i).getName()) != null) {
                        dataBean = skosExtrated.get(skosData.get(i).getName());
                    } else {
                        dataBean = skosData.get(i);
                    }
                    skosExtrated.put(dataBean.getName(), dataBean);
                }
            }
        }
    }
    log.debug("End extractSkosConcept");
}
Also used : SkosBean(com.localidata.bean.SkosBean) DataBean(com.localidata.bean.DataBean)

Example 7 with SkosBean

use of com.localidata.bean.SkosBean in project local-data-aragopedia by aragonopendata.

the class GenerateRDF method readXlsxFile.

private void readXlsxFile(File file, ConfigBean configBean) {
    log.debug("Init readXlsxFile");
    InputStream inp = null;
    Workbook wb = null;
    try {
        inp = new FileInputStream(file);
        wb = WorkbookFactory.create(inp);
    } catch (FileNotFoundException e) {
        log.error(e.getMessage());
    } catch (InvalidFormatException e) {
        log.error(e.getMessage());
    } catch (IOException e) {
        log.error(e.getMessage());
    }
    Sheet sheet = wb.getSheetAt(0);
    Row rowName = sheet.getRow(0);
    Row rowNameNormalized = sheet.getRow(1);
    Row rowNormalization = sheet.getRow(2);
    Row rowDimMesure = sheet.getRow(3);
    Row rowType = sheet.getRow(4);
    Row rowSkosfile = sheet.getRow(5);
    Row rowConstant = sheet.getRow(6);
    Row rowConstantValue = sheet.getRow(7);
    Row rowRelationKos = sheet.getRow(8);
    Row rowKosNameNormalized = sheet.getRow(9);
    Row rowKosName = sheet.getRow(10);
    boolean cont = true;
    int columnReaded = 0;
    while (cont) {
        Cell cellName = rowName.getCell(columnReaded);
        Cell cellNameNormalized = rowNameNormalized.getCell(columnReaded);
        Cell cellNormalization = rowNormalization.getCell(columnReaded);
        Cell cellDimMesure = rowDimMesure.getCell(columnReaded);
        Cell cellType = rowType.getCell(columnReaded);
        Cell cellSkosfile = null;
        if (rowSkosfile != null)
            cellSkosfile = rowSkosfile.getCell(columnReaded);
        Cell cellConstant = null;
        if (rowConstant != null)
            cellConstant = rowConstant.getCell(columnReaded);
        Cell cellConstantValue = null;
        if (rowConstantValue != null)
            cellConstantValue = rowConstantValue.getCell(columnReaded);
        Cell cellRelationKos = null;
        if (rowRelationKos != null)
            cellRelationKos = rowRelationKos.getCell(columnReaded);
        Cell cellKosName = null;
        if (rowKosName != null)
            cellKosName = rowKosName.getCell(columnReaded);
        Cell cellKosNameNormalized = null;
        if (rowKosNameNormalized != null)
            cellKosNameNormalized = rowKosNameNormalized.getCell(columnReaded);
        DataBean dataBean = new DataBean();
        if (cellName == null) {
            if (rowName.getCell((columnReaded + 1)) == null)
                cont = false;
            else
                columnReaded++;
        } else {
            dataBean.setName(cellName.getStringCellValue());
            if (cellNameNormalized != null) {
                dataBean.setNameNormalized(cellNameNormalized.getStringCellValue());
            } else {
                log.error("Error in config " + file.getName() + " in cell name normalized");
            }
            if (cellNormalization != null) {
                dataBean.setNormalizacion(cellNormalization.getStringCellValue());
            } else {
                log.error("Error in config " + file.getName() + " in cell normalization");
            }
            if (cellDimMesure != null) {
                dataBean.setDimensionMesure(cellDimMesure.getStringCellValue());
            } else {
                log.error("Error in config " + file.getName() + " in cell dim mesure");
            }
            dataBean.setIdConfig(configBean.getId());
            String type = "";
            if (cellType != null) {
                type = cellType.getStringCellValue();
            } else {
                type = "xsd:string";
            }
            dataBean.setType(type);
            if (cellSkosfile != null && !cellSkosfile.getStringCellValue().equals("")) {
                HashMap<String, SkosBean> mapSkos = readMappingFile(cellSkosfile.getStringCellValue());
                dataBean.setMapSkos(mapSkos);
                configBean.getMapData().put(dataBean.getNameNormalized(), dataBean);
                dataWithSkos.add(dataBean);
            } else {
                configBean.getMapData().put(dataBean.getNameNormalized(), dataBean);
            }
            if (Prop.addDataConstant && cellConstant != null && cellConstant.getStringCellValue().equals(Constants.constante)) {
                if (cellConstantValue != null) {
                    dataBean.setConstant(cellConstantValue.getStringCellValue() + "");
                    configBean.getListDataConstant().add(dataBean);
                }
            }
            if (cellRelationKos != null) {
                if (Utils.v(cellRelationKos.getStringCellValue())) {
                    dataBean.setRelationKos(cellRelationKos.getStringCellValue());
                    dataWithSkosHierarchical.add(dataBean);
                }
            }
            if (Utils.v(cellKosNameNormalized) && Utils.v(cellKosNameNormalized.getStringCellValue())) {
                dataBean.setKosNameNormalized(cellKosNameNormalized.getStringCellValue());
            } else {
                dataBean.setKosNameNormalized(dataBean.getNameNormalized());
            }
            if (Utils.v(cellKosName) && Utils.v(cellKosName.getStringCellValue())) {
                dataBean.setKosName(cellKosName.getStringCellValue());
            } else {
                dataBean.setKosName(dataBean.getName());
            }
            columnReaded++;
        }
    }
    log.debug("End readXlsxFile");
}
Also used : FileInputStream(java.io.FileInputStream) InputStream(java.io.InputStream) FileNotFoundException(java.io.FileNotFoundException) IOException(java.io.IOException) InvalidFormatException(org.apache.poi.openxml4j.exceptions.InvalidFormatException) Workbook(org.apache.poi.ss.usermodel.Workbook) FileInputStream(java.io.FileInputStream) DataBean(com.localidata.bean.DataBean) SkosBean(com.localidata.bean.SkosBean) Row(org.apache.poi.ss.usermodel.Row) Sheet(org.apache.poi.ss.usermodel.Sheet) Cell(org.apache.poi.ss.usermodel.Cell)

Example 8 with SkosBean

use of com.localidata.bean.SkosBean in project local-data-aragopedia by aragonopendata.

the class GenerateRDF method readMappingFileCSV.

private HashMap<String, SkosBean> readMappingFileCSV(String skosPath) {
    log.debug("Init readMappingFileCSV");
    HashMap<String, SkosBean> mapSkos = new HashMap<String, SkosBean>();
    if (skosPath.endsWith("xlsx"))
        skosPath = skosPath.replace("xlsx", "csv");
    File skosMappingg = new File(configDirectoryString + File.separator + skosPath);
    List<String> csvLines;
    try {
        csvLines = FileUtils.readLines(skosMappingg, "UTF-8");
        for (String line : csvLines) {
            String[] cells = line.split("\",\"");
            String cellId = removeStartEndCaracter(cells[0]);
            String cellUri = removeStartEndCaracter(cells[1]);
            SkosBean skosBean = new SkosBean();
            SkosBean skosBeanExtra = new SkosBean();
            skosBean.setLabel(cellId);
            cellId = Utils.urlify(cellId);
            skosBean.setId(cellId);
            String id = cellUri.substring(cellUri.lastIndexOf("/") + 1, cellUri.length());
            if (!cellId.equals(id)) {
                skosBeanExtra.setId(id);
                skosBeanExtra.setLabel(id);
                skosBeanExtra.setURI(cellUri);
                mapSkos.put(id, skosBeanExtra);
            }
            skosBean.setURI(cellUri);
            mapSkos.put(cellId, skosBean);
        }
    } catch (IOException e) {
        log.error("Error read csv ", e);
    }
    log.debug("End readMappingFileCSV");
    return mapSkos;
}
Also used : HashMap(java.util.HashMap) SkosBean(com.localidata.bean.SkosBean) IOException(java.io.IOException) File(java.io.File)

Example 9 with SkosBean

use of com.localidata.bean.SkosBean in project local-data-aragopedia by aragonopendata.

the class GenerateRDF method writeSkosTTL.

public void writeSkosTTL() {
    log.debug("Init createSkos");
    log.info("Init to create skos");
    File kosFile = new File(outputDirectoryString + File.separator + "DatosTTL" + File.separator + "codelists" + File.separator + "kos.ttl");
    StringBuffer resultIni = new StringBuffer();
    StringBuffer resultFin = new StringBuffer();
    ArrayList<String> kosCreated = new ArrayList<String>();
    resultIni.append(TransformToRDF.addPrefix());
    for (Iterator<DataBean> itDataBean = dataWithSkos.iterator(); itDataBean.hasNext(); ) {
        DataBean dataBean = itDataBean.next();
        if (dataBean != null && dataBean.isWriteSkos() && !kosCreated.contains(dataBean.getNameNormalized()) && dataBean.getMapSkos().size() > 0) {
            String suject = Prop.host + "/" + Prop.kosName + "/" + Prop.datasetName + "/" + dataBean.getKosNameNormalized();
            resultIni.append("<" + suject + "> " + "a skos:ConceptScheme;\n");
            resultIni.append("\tskos:notation \"" + dataBean.getKosNameNormalized() + "\";\n");
            resultIni.append("\trdfs:label \"" + dataBean.getKosName() + "\";\n");
            for (Iterator<String> iterator3 = dataBean.getMapSkos().keySet().iterator(); iterator3.hasNext(); ) {
                String keySkos = iterator3.next();
                SkosBean skosBean = dataBean.getMapSkos().get(keySkos);
                if (skosBean != null) {
                    String sujectKos = suject + "/" + Utils.urlify(skosBean.getId());
                    if (skosBean.getParent() == null) {
                        resultIni.append("\tskos:hasTopConcept <" + sujectKos + ">");
                        if (iterator3.hasNext()) {
                            resultIni.append(";\n");
                        } else {
                            resultIni.append(".\n");
                        }
                    }
                    resultFin.append("<" + sujectKos + "> a skos:Concept;\n");
                    resultFin.append("\tskos:inScheme <" + suject + ">;\n");
                    String label = skosBean.getId();
                    if (skosBean.getLabel() != null && !skosBean.getLabel().equals(""))
                        label = skosBean.getLabel();
                    resultFin.append("\tskos:notation \"" + skosBean.getId() + "\";\n");
                    resultFin.append("\tskos:prefLabel \"" + Utils.prefLabelClean(label) + "\"");
                    if (skosBean.getParent() != null) {
                        resultFin.append(";\n");
                        resultFin.append("\tskos:broader <" + suject + "/" + skosBean.getParent().getId() + ">");
                    }
                    if (skosBean.getSons().size() > 0) {
                        resultFin.append(";\n");
                        for (Iterator<SkosBean> itSons = skosBean.getSons().iterator(); itSons.hasNext(); ) {
                            SkosBean son = itSons.next();
                            resultFin.append("\tskos:narrower <" + suject + "/" + son.getId() + ">");
                            if (itSons.hasNext()) {
                                resultFin.append(";\n");
                            } else {
                                resultFin.append(".\n");
                            }
                        }
                    } else {
                        resultFin.append(".\n");
                    }
                    resultFin.append("\n");
                }
            }
            resultIni.append("\n");
            resultIni.append(resultFin);
            kosCreated.add(dataBean.getNameNormalized());
        }
        Utils.stringToFileAppend(resultIni.toString(), kosFile);
        resultIni.setLength(0);
        resultFin.setLength(0);
    }
    log.info("end to create skos");
    log.debug("End createSkos");
}
Also used : SkosBean(com.localidata.bean.SkosBean) ArrayList(java.util.ArrayList) File(java.io.File) DataBean(com.localidata.bean.DataBean)

Aggregations

SkosBean (com.localidata.bean.SkosBean)9 DataBean (com.localidata.bean.DataBean)7 IOException (java.io.IOException)7 File (java.io.File)6 GoogleDriveAPI (com.localidata.generic.GoogleDriveAPI)3 FileNotFoundException (java.io.FileNotFoundException)3 InvalidFormatException (org.apache.poi.openxml4j.exceptions.InvalidFormatException)3 ConfigBean (com.localidata.bean.ConfigBean)2 FileInputStream (java.io.FileInputStream)2 InputStream (java.io.InputStream)2 ArrayList (java.util.ArrayList)2 HashMap (java.util.HashMap)2 Cell (org.apache.poi.ss.usermodel.Cell)2 Row (org.apache.poi.ss.usermodel.Row)2 Sheet (org.apache.poi.ss.usermodel.Sheet)2 Workbook (org.apache.poi.ss.usermodel.Workbook)2 List (java.util.List)1