Examples with Locatable com.nedap.archie.rm.archetyped.Locatable used on opensource projects

Example 6 with Locatable

use of com.nedap.archie.rm.archetyped.Locatable in project openEHR_SDK by ehrbase.

the class CanonicalUtil method getAttributePathValue.

/**
 * Retrieve the value of an attribute identified by a path.
 * NB. This is not supposed to replace Locatable.itemsAtPath(), but instead it should be used
 * to resolve values in non locatable RMObject
 *
 * @param root
 * @param attributePath
 * @return
 * @see com.nedap.archie.rm.archetyped.Locatable
 */
private static Object getAttributePathValue(Object root, String attributePath, boolean keepArray) {
    Object rmObject = root;
    if (rmObject instanceof Locatable) {
        try {
            List<Object> items = ((Locatable) root).itemsAtPath(attributePath);
            if (!items.isEmpty())
                rmObject = keepArray ? items : items.get(0);
            else
                rmObject = null;
        } catch (Exception e) {
            throw new IllegalArgumentException("Invalid path:" + attributePath);
        }
    } else {
        if (!attributePath.contains("/"))
            rmObject = getAttributeValue(root, attributePath);
        else {
            String[] pathItems = attributePath.split("/");
            int iteration = 0;
            for (String item : pathItems) {
                rmObject = getAttributeValue(rmObject, item);
                iteration++;
                if (rmObject instanceof Locatable) {
                    // f.e. items in other_details
                    rmObject = locatableValueItem((RMObject) rmObject, iteration, Arrays.asList(pathItems).subList(iteration, pathItems.length));
                    break;
                }
            }
        }
    }
    if (rmObject instanceof RMObject)
        return new CanonicalJson().marshal((RMObject) rmObject);
    else
        return rmObject;
}

Example 7 with Locatable

use of com.nedap.archie.rm.archetyped.Locatable in project openEHR_SDK by ehrbase.

the class FlattenerTest method testFlattenEhrbaseBloodPressureSimpleDeV0.

@Test
public void testFlattenEhrbaseBloodPressureSimpleDeV0() {
    Flattener cut = new Flattener(new TestDataTemplateProvider());
    EhrbaseBloodPressureSimpleDeV0Composition bloodPressureSimpleDeV0 = TestData.buildEhrbaseBloodPressureSimpleDeV0();
    RMObject rmObject = new Unflattener(new TestDataTemplateProvider()).unflatten(bloodPressureSimpleDeV0);
    EhrbaseBloodPressureSimpleDeV0Composition actual = cut.flatten((Locatable) rmObject, EhrbaseBloodPressureSimpleDeV0Composition.class);
    assertThat(actual).isNotNull();
    assertThat(actual.getComposer()).isNotNull().extracting(Object::getClass).isEqualTo(PartyIdentified.class);
    PartyIdentified composer = (PartyIdentified) actual.getComposer();
    assertThat(composer.getName()).isEqualTo("Test");
    assertThat(actual.getParticipations()).extracting(p -> ((PartyIdentified) p.getPerformer()).getName(), p -> p.getFunction().getValue()).containsExactlyInAnyOrder(new Tuple("Test", "Pos1"), new Tuple("Test2", "Pos2"));
    assertThat(actual.getBloodPressureTrainingSample()).size().isEqualTo(1);
    assertThat(actual.getBloodPressureTrainingSample().get(0).getSubject()).isNotNull().extracting(Object::getClass).isEqualTo(PartySelf.class);
    assertThat(actual.getBloodPressureTrainingSample().get(0).getSystolicMagnitude()).isEqualTo(22d);
    assertThat(actual.getBloodPressureTrainingSample().get(0).getSystolicUnits()).isEqualTo("mm[Hg]");
    assertThat(actual.getBloodPressureTrainingSample().get(0).getKorotkoffSoundsDefiningCode()).isEqualTo(KorotkoffSoundsDefiningCode.FIFTH_SOUND);
    assertThat(actual.getBloodPressureTrainingSample().get(0).getMeanArterialPressureNullFlavourDefiningCode()).isNull();
}

Example 8 with Locatable

use of com.nedap.archie.rm.archetyped.Locatable in project openEHR_SDK by ehrbase.

the class FlattenerTest method testFlattenEhrbaseMultiOccurrenceDeV1.

@Test
public void testFlattenEhrbaseMultiOccurrenceDeV1() {
    Flattener cut = new Flattener(new TestDataTemplateProvider());
    EhrbaseMultiOccurrenceDeV1Composition bloodPressureSimpleDeV0 = TestData.buildEhrbaseMultiOccurrenceDeV1();
    RMObject rmObject = new Unflattener(new TestDataTemplateProvider()).unflatten(bloodPressureSimpleDeV0);
    EhrbaseMultiOccurrenceDeV1Composition actual = cut.flatten((Locatable) rmObject, EhrbaseMultiOccurrenceDeV1Composition.class);
    assertThat(actual).isNotNull();
    assertThat(actual.getBodyTemperature()).size().isEqualTo(2);
    BodyTemperatureObservation bodyTemperature1 = actual.getBodyTemperature().get(0);
    assertThat(bodyTemperature1.getAnyEvent()).extracting(e -> ((BodyTemperatureAnyEventPointEvent) e).getTemperatureMagnitude()).containsExactlyInAnyOrder(11d, 22d);
    BodyTemperatureLocationOfMeasurementChoice locationOfMeasurement1 = bodyTemperature1.getLocationOfMeasurement();
    assertThat(locationOfMeasurement1.getClass()).isEqualTo(BodyTemperatureLocationOfMeasurementDvCodedText.class);
    assertThat(((BodyTemperatureLocationOfMeasurementDvCodedText) locationOfMeasurement1).getLocationOfMeasurementDefiningCode()).isEqualTo(LocationOfMeasurementDefiningCode.FOREHEAD);
    BodyTemperatureObservation bodyTemperature2 = actual.getBodyTemperature().get(1);
    BodyTemperatureLocationOfMeasurementChoice locationOfMeasurement2 = bodyTemperature2.getLocationOfMeasurement();
    assertThat(locationOfMeasurement2.getClass()).isEqualTo(BodyTemperatureLocationOfMeasurementDvText.class);
    assertThat(((BodyTemperatureLocationOfMeasurementDvText) locationOfMeasurement2).getLocationOfMeasurementValue()).isEqualTo("location");
}

Example 9 with Locatable

use of com.nedap.archie.rm.archetyped.Locatable in project openEHR_SDK by ehrbase.

the class WebTemplateSkeletonBuilder method build.

@SuppressWarnings("unchecked")
public static <T> T build(WebTemplateNode node, boolean withChildren, Class<T> clazz) {
    String rmclass = node.getRmType();
    CComplexObject elementConstraint = new CComplexObject();
    elementConstraint.setRmTypeName(rmclass);
    Object skeleton;
    switch(rmclass) {
        case "UID_BASED_ID":
            skeleton = new HierObjectId();
            break;
        case "PARTY_PROXY":
            skeleton = new PartyIdentified();
            break;
        case "STRING":
        case "LONG":
            skeleton = null;
            break;
        case "BOOLEAN":
            skeleton = false;
            break;
        default:
            skeleton = RM_OBJECT_CREATOR.create(elementConstraint);
            break;
    }
    if (withChildren) {
        node.getChildren().stream().filter(n -> !List.of("name", "archetype_node_id", "offset").contains(n.getId())).forEach(c -> {
            Object childObject = build(c, true, Object.class);
            insert(node, (RMObject) skeleton, c, childObject);
        });
    }
    if (skeleton instanceof Locatable) {
        Optional<WebTemplateNode> name = node.findChildById("name");
        if (name.isPresent()) {
            if (name.get().getRmType().equals(RmConstants.DV_CODED_TEXT)) {
                ((Locatable) skeleton).setName(extractDefault(name.get(), DvCodedText.class).orElseThrow());
            } else {
                ((Locatable) skeleton).setName(extractDefault(name.get(), DvText.class).orElse(new DvText(node.getName())));
            }
        } else {
            ((Locatable) skeleton).setName(new DvText(node.getName()));
        }
        ((Locatable) skeleton).setArchetypeNodeId(node.getNodeId());
    }
    if (skeleton instanceof Entry) {
        ((Entry) skeleton).setEncoding(new CodePhrase(new TerminologyId("IANA_character-sets"), "UTF-8"));
        node.findChildById("subject").map(n -> build(n, false, PartyProxy.class)).ifPresent(((Entry) skeleton)::setSubject);
    }
    if (skeleton instanceof Composition) {
        node.findChildById("category").flatMap(n -> extractDefault(n, DvCodedText.class)).ifPresent(((Composition) skeleton)::setCategory);
    }
    if (skeleton instanceof DvInterval) {
        ((DvInterval<?>) skeleton).setLowerIncluded(true);
        ((DvInterval<?>) skeleton).setUpperIncluded(true);
    }
    if (skeleton instanceof PartyRelated) {
        node.findChildById("relationship").flatMap(n -> extractDefault(n, DvCodedText.class)).ifPresent(((PartyRelated) skeleton)::setRelationship);
    }
    if (skeleton == null || clazz.isAssignableFrom(skeleton.getClass())) {
        return (T) skeleton;
    } else {
        throw new SdkException(String.format("%s not assignable from %s", skeleton.getClass(), clazz));
    }
}