Examples with Pc edu.cmu.tetrad.search.Pc used on opensource projects

Example 6 with Pc

use of edu.cmu.tetrad.search.Pc in project tetrad by cmu-phil.

the class TestPcd method checkWithKnowledge.

/**
 * Presents the input graph to FCI and checks to make sure the output of FCI is equivalent to the given output
 * graph.
 */
private void checkWithKnowledge(String inputGraph, String outputGraph, IKnowledge knowledge) {
    // Set up graph and node objects.
    Graph graph = GraphConverter.convert(inputGraph);
    // Set up search.
    IndependenceTest independence = new IndTestDSep(graph);
    Pc pc = new Pc(independence);
    pc.setKnowledge(knowledge);
    // Run search
    Graph resultGraph = pc.search();
    // Build comparison graph.
    Graph trueGraph = GraphConverter.convert(outputGraph);
    resultGraph = GraphUtils.replaceNodes(resultGraph, trueGraph.getNodes());
    // Do test.
    assertTrue(resultGraph.equals(trueGraph));
}