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Example 6 with RestorableIterator

use of edu.iu.dsc.tws.comms.shuffle.RestorableIterator in project twister2 by DSC-SPIDAL.

the class SortJoinUtils method join.

public static Iterator<JoinedTuple> join(List<Tuple> leftRelation, List<Tuple> rightRelation, KeyComparatorWrapper comparator, CommunicationContext.JoinType joinType) {
    RestorableIterator leftRstIt = new ListBasedRestorableIterator(leftRelation);
    RestorableIterator rightRstIt = new ListBasedRestorableIterator(rightRelation);
    if (joinType == CommunicationContext.JoinType.INNER) {
        return innerJoin(leftRstIt, rightRstIt, comparator);
    } else {
        return outerJoin(leftRstIt, rightRstIt, comparator, joinType);
    }
}
Also used : RestorableIterator(edu.iu.dsc.tws.comms.shuffle.RestorableIterator)

Example 7 with RestorableIterator

use of edu.iu.dsc.tws.comms.shuffle.RestorableIterator in project twister2 by DSC-SPIDAL.

the class SortJoinUtilsTest method fullOuterJoinComparision.

/**
 * This test compares the results of in memory and disk based full outer joins.
 * Purpose is to verify the accuracy of disk based full outer join
 */
@Test
public void fullOuterJoinComparision() {
    List<Tuple> left = new ArrayList<>();
    List<Tuple> right = new ArrayList<>();
    Random random = new Random();
    for (int i = 0; i < 100; i++) {
        left.add(Tuple.of(random.nextInt(10), random.nextInt()));
        right.add(Tuple.of(random.nextInt(10), random.nextInt()));
    }
    FSKeyedSortedMerger2 fsk1 = new FSKeyedSortedMerger2(10, 100, "/tmp", "op-1-" + UUID.randomUUID().toString(), MessageTypes.INTEGER, MessageTypes.INTEGER, (Comparator<Integer>) Integer::compare, 0, false, 1);
    for (Tuple tuple : left) {
        byte[] data = MessageTypes.INTEGER.getDataPacker().packToByteArray((Integer) tuple.getValue());
        fsk1.add(tuple.getKey(), data, data.length);
        fsk1.run();
    }
    FSKeyedSortedMerger2 fsk2 = new FSKeyedSortedMerger2(10, 100, "/tmp", "op-2-" + UUID.randomUUID().toString(), MessageTypes.INTEGER, MessageTypes.INTEGER, (Comparator<Integer>) Integer::compare, 0, false, 1);
    for (Tuple tuple : right) {
        byte[] data = MessageTypes.INTEGER.getDataPacker().packToByteArray((Integer) tuple.getValue());
        fsk2.add(tuple.getKey(), data, data.length);
        fsk2.run();
    }
    CommonThreadPool.init(Config.newBuilder().build());
    fsk1.switchToReading();
    fsk2.switchToReading();
    Iterator iterator = SortJoinUtils.fullOuterJoin((RestorableIterator) fsk1.readIterator(), (RestorableIterator) fsk2.readIterator(), new KeyComparatorWrapper((Comparator<Integer>) Integer::compare));
    List<Object> objects = SortJoinUtils.fullOuterJoin(left, right, new KeyComparatorWrapper(Comparator.naturalOrder()));
    objects.sort(Comparator.comparingInt(o -> (Integer) ((JoinedTuple) o).getKey()));
    int i = 0;
    while (iterator.hasNext()) {
        JoinedTuple nextFromIt = (JoinedTuple) iterator.next();
        JoinedTuple nextFromList = (JoinedTuple) objects.get(i++);
        Assert.assertEquals(nextFromIt.getKey(), nextFromList.getKey());
    }
    Assert.assertEquals(i, objects.size());
}
Also used : CommunicationContext(edu.iu.dsc.tws.api.comms.CommunicationContext) Tuple(edu.iu.dsc.tws.api.comms.structs.Tuple) FSKeyedSortedMerger2(edu.iu.dsc.tws.comms.shuffle.FSKeyedSortedMerger2) RestorableIterator(edu.iu.dsc.tws.comms.shuffle.RestorableIterator) Iterator(java.util.Iterator) CommonThreadPool(edu.iu.dsc.tws.api.util.CommonThreadPool) Random(java.util.Random) Test(org.junit.Test) JoinedTuple(edu.iu.dsc.tws.api.comms.structs.JoinedTuple) Config(edu.iu.dsc.tws.api.config.Config) UUID(java.util.UUID) MessageTypes(edu.iu.dsc.tws.api.comms.messaging.types.MessageTypes) Logger(java.util.logging.Logger) ArrayList(java.util.ArrayList) List(java.util.List) Comparator(java.util.Comparator) Assert(org.junit.Assert) FSKeyedSortedMerger2(edu.iu.dsc.tws.comms.shuffle.FSKeyedSortedMerger2) ArrayList(java.util.ArrayList) JoinedTuple(edu.iu.dsc.tws.api.comms.structs.JoinedTuple) Comparator(java.util.Comparator) Random(java.util.Random) RestorableIterator(edu.iu.dsc.tws.comms.shuffle.RestorableIterator) Iterator(java.util.Iterator) Tuple(edu.iu.dsc.tws.api.comms.structs.Tuple) JoinedTuple(edu.iu.dsc.tws.api.comms.structs.JoinedTuple) Test(org.junit.Test)

Example 8 with RestorableIterator

use of edu.iu.dsc.tws.comms.shuffle.RestorableIterator in project twister2 by DSC-SPIDAL.

the class SortJoinUtilsTest method rightOuterJoinComparision.

/**
 * This test compares the results of in memory and disk based right outer joins.
 * Purpose is to verify the accuracy of disk based right outer join
 */
@Test
public void rightOuterJoinComparision() {
    List<Tuple> left = new ArrayList<>();
    List<Tuple> right = new ArrayList<>();
    Random random = new Random();
    for (int i = 0; i < 100; i++) {
        left.add(Tuple.of(random.nextInt(10), random.nextInt()));
        right.add(Tuple.of(random.nextInt(10), random.nextInt()));
    }
    FSKeyedSortedMerger2 fsk1 = new FSKeyedSortedMerger2(10, 100, "/tmp", "op-1-" + UUID.randomUUID().toString(), MessageTypes.INTEGER, MessageTypes.INTEGER, (Comparator<Integer>) Integer::compare, 0, false, 1);
    for (Tuple tuple : left) {
        byte[] data = MessageTypes.INTEGER.getDataPacker().packToByteArray((Integer) tuple.getValue());
        fsk1.add(tuple.getKey(), data, data.length);
        fsk1.run();
    }
    FSKeyedSortedMerger2 fsk2 = new FSKeyedSortedMerger2(10, 100, "/tmp", "op-2-" + UUID.randomUUID().toString(), MessageTypes.INTEGER, MessageTypes.INTEGER, (Comparator<Integer>) Integer::compare, 0, false, 1);
    for (Tuple tuple : right) {
        byte[] data = MessageTypes.INTEGER.getDataPacker().packToByteArray((Integer) tuple.getValue());
        fsk2.add(tuple.getKey(), data, data.length);
        fsk2.run();
    }
    CommonThreadPool.init(Config.newBuilder().build());
    fsk1.switchToReading();
    fsk2.switchToReading();
    Iterator iterator = SortJoinUtils.rightOuterJoin((RestorableIterator) fsk1.readIterator(), (RestorableIterator) fsk2.readIterator(), new KeyComparatorWrapper((Comparator<Integer>) Integer::compare));
    List<Object> objects = SortJoinUtils.rightOuterJoin(left, right, new KeyComparatorWrapper(Comparator.naturalOrder()));
    objects.sort(Comparator.comparingInt(o -> (Integer) ((JoinedTuple) o).getKey()));
    int i = 0;
    while (iterator.hasNext()) {
        JoinedTuple nextFromIt = (JoinedTuple) iterator.next();
        JoinedTuple nextFromList = (JoinedTuple) objects.get(i++);
        Assert.assertEquals(nextFromIt.getKey(), nextFromList.getKey());
    }
    Assert.assertEquals(i, objects.size());
}
Also used : CommunicationContext(edu.iu.dsc.tws.api.comms.CommunicationContext) Tuple(edu.iu.dsc.tws.api.comms.structs.Tuple) FSKeyedSortedMerger2(edu.iu.dsc.tws.comms.shuffle.FSKeyedSortedMerger2) RestorableIterator(edu.iu.dsc.tws.comms.shuffle.RestorableIterator) Iterator(java.util.Iterator) CommonThreadPool(edu.iu.dsc.tws.api.util.CommonThreadPool) Random(java.util.Random) Test(org.junit.Test) JoinedTuple(edu.iu.dsc.tws.api.comms.structs.JoinedTuple) Config(edu.iu.dsc.tws.api.config.Config) UUID(java.util.UUID) MessageTypes(edu.iu.dsc.tws.api.comms.messaging.types.MessageTypes) Logger(java.util.logging.Logger) ArrayList(java.util.ArrayList) List(java.util.List) Comparator(java.util.Comparator) Assert(org.junit.Assert) FSKeyedSortedMerger2(edu.iu.dsc.tws.comms.shuffle.FSKeyedSortedMerger2) ArrayList(java.util.ArrayList) JoinedTuple(edu.iu.dsc.tws.api.comms.structs.JoinedTuple) Comparator(java.util.Comparator) Random(java.util.Random) RestorableIterator(edu.iu.dsc.tws.comms.shuffle.RestorableIterator) Iterator(java.util.Iterator) Tuple(edu.iu.dsc.tws.api.comms.structs.Tuple) JoinedTuple(edu.iu.dsc.tws.api.comms.structs.JoinedTuple) Test(org.junit.Test)

Example 9 with RestorableIterator

use of edu.iu.dsc.tws.comms.shuffle.RestorableIterator in project twister2 by DSC-SPIDAL.

the class SortJoinUtilsTest method innerJoinComparision.

/**
 * This test compares the results of in memory and disk based inner joins.
 * Purpose is to verify the accuracy of disk based inner join
 */
@Test
public void innerJoinComparision() {
    List<Tuple> left = new ArrayList<>();
    List<Tuple> right = new ArrayList<>();
    Random random = new Random();
    for (int i = 0; i < 100; i++) {
        left.add(Tuple.of(random.nextInt(10), random.nextInt()));
        right.add(Tuple.of(random.nextInt(10), random.nextInt()));
    }
    FSKeyedSortedMerger2 fsk1 = new FSKeyedSortedMerger2(10, 100, "/tmp", "op-1-" + UUID.randomUUID().toString(), MessageTypes.INTEGER, MessageTypes.INTEGER, (Comparator<Integer>) Integer::compare, 0, false, 1);
    for (Tuple tuple : left) {
        byte[] data = MessageTypes.INTEGER.getDataPacker().packToByteArray((Integer) tuple.getValue());
        fsk1.add(tuple.getKey(), data, data.length);
        fsk1.run();
    }
    FSKeyedSortedMerger2 fsk2 = new FSKeyedSortedMerger2(10, 100, "/tmp", "op-2-" + UUID.randomUUID().toString(), MessageTypes.INTEGER, MessageTypes.INTEGER, (Comparator<Integer>) Integer::compare, 0, false, 1);
    for (Tuple tuple : right) {
        byte[] data = MessageTypes.INTEGER.getDataPacker().packToByteArray((Integer) tuple.getValue());
        fsk2.add(tuple.getKey(), data, data.length);
        fsk2.run();
    }
    CommonThreadPool.init(Config.newBuilder().build());
    fsk1.switchToReading();
    fsk2.switchToReading();
    Iterator iterator = SortJoinUtils.innerJoin((RestorableIterator) fsk1.readIterator(), (RestorableIterator) fsk2.readIterator(), new KeyComparatorWrapper((Comparator<Integer>) Integer::compare));
    List<Object> objects = SortJoinUtils.innerJoin(left, right, new KeyComparatorWrapper(Comparator.naturalOrder()));
    objects.sort(Comparator.comparingInt(o -> (Integer) ((JoinedTuple) o).getKey()));
    int i = 0;
    while (iterator.hasNext()) {
        JoinedTuple nextFromIt = (JoinedTuple) iterator.next();
        JoinedTuple nextFromList = (JoinedTuple) objects.get(i++);
        Assert.assertEquals(nextFromIt.getKey(), nextFromList.getKey());
    }
    Assert.assertEquals(i, objects.size());
}
Also used : CommunicationContext(edu.iu.dsc.tws.api.comms.CommunicationContext) Tuple(edu.iu.dsc.tws.api.comms.structs.Tuple) FSKeyedSortedMerger2(edu.iu.dsc.tws.comms.shuffle.FSKeyedSortedMerger2) RestorableIterator(edu.iu.dsc.tws.comms.shuffle.RestorableIterator) Iterator(java.util.Iterator) CommonThreadPool(edu.iu.dsc.tws.api.util.CommonThreadPool) Random(java.util.Random) Test(org.junit.Test) JoinedTuple(edu.iu.dsc.tws.api.comms.structs.JoinedTuple) Config(edu.iu.dsc.tws.api.config.Config) UUID(java.util.UUID) MessageTypes(edu.iu.dsc.tws.api.comms.messaging.types.MessageTypes) Logger(java.util.logging.Logger) ArrayList(java.util.ArrayList) List(java.util.List) Comparator(java.util.Comparator) Assert(org.junit.Assert) FSKeyedSortedMerger2(edu.iu.dsc.tws.comms.shuffle.FSKeyedSortedMerger2) ArrayList(java.util.ArrayList) JoinedTuple(edu.iu.dsc.tws.api.comms.structs.JoinedTuple) Comparator(java.util.Comparator) Random(java.util.Random) RestorableIterator(edu.iu.dsc.tws.comms.shuffle.RestorableIterator) Iterator(java.util.Iterator) Tuple(edu.iu.dsc.tws.api.comms.structs.Tuple) JoinedTuple(edu.iu.dsc.tws.api.comms.structs.JoinedTuple) Test(org.junit.Test)

Aggregations

RestorableIterator (edu.iu.dsc.tws.comms.shuffle.RestorableIterator)9 JoinedTuple (edu.iu.dsc.tws.api.comms.structs.JoinedTuple)8 Tuple (edu.iu.dsc.tws.api.comms.structs.Tuple)8 Iterator (java.util.Iterator)8 ArrayList (java.util.ArrayList)6 List (java.util.List)6 CommunicationContext (edu.iu.dsc.tws.api.comms.CommunicationContext)5 MessageTypes (edu.iu.dsc.tws.api.comms.messaging.types.MessageTypes)5 Config (edu.iu.dsc.tws.api.config.Config)5 CommonThreadPool (edu.iu.dsc.tws.api.util.CommonThreadPool)5 FSKeyedSortedMerger2 (edu.iu.dsc.tws.comms.shuffle.FSKeyedSortedMerger2)5 Comparator (java.util.Comparator)5 Random (java.util.Random)5 UUID (java.util.UUID)5 Logger (java.util.logging.Logger)5 Assert (org.junit.Assert)5 Test (org.junit.Test)5