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Example 41 with Attribute

use of edu.uci.ics.textdb.api.schema.Attribute in project textdb by TextDB.

the class KeywordPhraseTest method testCombinedSpanInMultipleFieldsQuery.

/**
     * Verifies: getNextTuple should return Combined Span info for the phrase
     * 
     * @throws Exception
     */
@Test
public void testCombinedSpanInMultipleFieldsQuery() throws Exception {
    // Prepare Query
    String query = "lin clooney";
    ArrayList<String> attributeNames = new ArrayList<>();
    attributeNames.add(TestConstants.FIRST_NAME);
    attributeNames.add(TestConstants.LAST_NAME);
    attributeNames.add(TestConstants.DESCRIPTION);
    // Prepare expected result list
    List<Span> list = new ArrayList<>();
    Span span1 = new Span("lastName", 0, 11, "lin clooney", "lin clooney");
    Span span2 = new Span("description", 0, 11, "lin clooney", "Lin Clooney");
    Span span3 = new Span("description", 25, 36, "lin clooney", "lin clooney");
    list.add(span1);
    list.add(span2);
    list.add(span3);
    Attribute[] schemaAttributes = new Attribute[TestConstants.ATTRIBUTES_PEOPLE.length + 1];
    for (int count = 0; count < schemaAttributes.length - 1; count++) {
        schemaAttributes[count] = TestConstants.ATTRIBUTES_PEOPLE[count];
    }
    schemaAttributes[schemaAttributes.length - 1] = new Attribute(RESULTS, AttributeType.LIST);
    IField[] fields1 = { new StringField("george lin lin"), new StringField("lin clooney"), new IntegerField(43), new DoubleField(6.06), new DateField(new SimpleDateFormat("MM-dd-yyyy").parse("01-13-1973")), new TextField("Lin Clooney is Short and lin clooney is Angry"), new ListField<>(list) };
    Tuple tuple1 = new Tuple(new Schema(schemaAttributes), fields1);
    List<Tuple> expectedResultList = new ArrayList<>();
    expectedResultList.add(tuple1);
    // Perform Query
    List<Tuple> resultList = KeywordTestHelper.getQueryResults(PEOPLE_TABLE, query, attributeNames, phrase);
    // Perform Check
    boolean contains = TestUtils.equals(expectedResultList, resultList);
    Assert.assertTrue(contains);
}
Also used : Attribute(edu.uci.ics.textdb.api.schema.Attribute) Schema(edu.uci.ics.textdb.api.schema.Schema) ArrayList(java.util.ArrayList) IntegerField(edu.uci.ics.textdb.api.field.IntegerField) IField(edu.uci.ics.textdb.api.field.IField) Span(edu.uci.ics.textdb.api.span.Span) StringField(edu.uci.ics.textdb.api.field.StringField) TextField(edu.uci.ics.textdb.api.field.TextField) DateField(edu.uci.ics.textdb.api.field.DateField) SimpleDateFormat(java.text.SimpleDateFormat) DoubleField(edu.uci.ics.textdb.api.field.DoubleField) Tuple(edu.uci.ics.textdb.api.tuple.Tuple) Test(org.junit.Test)

Example 42 with Attribute

use of edu.uci.ics.textdb.api.schema.Attribute in project textdb by TextDB.

the class KeywordPhraseTest method testWordInMultipleFieldsQueryWithStopWords1.

/**
     * Verifies: Query with Stop Words match corresponding phrases in the
     * document
     * 
     * @throws Exception
     */
@Test
public void testWordInMultipleFieldsQueryWithStopWords1() throws Exception {
    // Prepare Query
    String query = "lin and and angry";
    ArrayList<String> attributeNames = new ArrayList<>();
    attributeNames.add(TestConstants.FIRST_NAME);
    attributeNames.add(TestConstants.LAST_NAME);
    attributeNames.add(TestConstants.DESCRIPTION);
    // Prepare expected result list
    List<Span> list = new ArrayList<>();
    Span span1 = new Span("description", 25, 45, "lin and and angry", "lin clooney is Angry");
    list.add(span1);
    Attribute[] schemaAttributes = new Attribute[TestConstants.ATTRIBUTES_PEOPLE.length + 1];
    for (int count = 0; count < schemaAttributes.length - 1; count++) {
        schemaAttributes[count] = TestConstants.ATTRIBUTES_PEOPLE[count];
    }
    schemaAttributes[schemaAttributes.length - 1] = new Attribute(RESULTS, AttributeType.LIST);
    IField[] fields1 = { new StringField("george lin lin"), new StringField("lin clooney"), new IntegerField(43), new DoubleField(6.06), new DateField(new SimpleDateFormat("MM-dd-yyyy").parse("01-13-1973")), new TextField("Lin Clooney is Short and lin clooney is Angry"), new ListField<>(list) };
    Tuple tuple1 = new Tuple(new Schema(schemaAttributes), fields1);
    List<Tuple> expectedResultList = new ArrayList<>();
    expectedResultList.add(tuple1);
    // Perform Query
    List<Tuple> resultList = KeywordTestHelper.getQueryResults(PEOPLE_TABLE, query, attributeNames, phrase);
    // Perform Check
    boolean contains = TestUtils.equals(expectedResultList, resultList);
    Assert.assertTrue(contains);
}
Also used : Attribute(edu.uci.ics.textdb.api.schema.Attribute) Schema(edu.uci.ics.textdb.api.schema.Schema) ArrayList(java.util.ArrayList) IntegerField(edu.uci.ics.textdb.api.field.IntegerField) IField(edu.uci.ics.textdb.api.field.IField) Span(edu.uci.ics.textdb.api.span.Span) StringField(edu.uci.ics.textdb.api.field.StringField) TextField(edu.uci.ics.textdb.api.field.TextField) DateField(edu.uci.ics.textdb.api.field.DateField) SimpleDateFormat(java.text.SimpleDateFormat) DoubleField(edu.uci.ics.textdb.api.field.DoubleField) Tuple(edu.uci.ics.textdb.api.tuple.Tuple) Test(org.junit.Test)

Example 43 with Attribute

use of edu.uci.ics.textdb.api.schema.Attribute in project textdb by TextDB.

the class KeywordPhraseTest method testWordInMultipleFieldsQueryWithStopWords5.

/**
     * Verifies: Query with Stop Words match corresponding phrases in the
     * document Used to cause exception sometimes if there is a space between
     * words
     * 
     * @throws Exception
     *             with Medline data
     */
@Test
public void testWordInMultipleFieldsQueryWithStopWords5() throws Exception {
    // Prepare Query
    String query = "gain weight";
    ArrayList<String> attributeNames = new ArrayList<>();
    attributeNames.add(keywordTestConstants.ABSTRACT);
    // Prepare expected result list
    List<Span> list = new ArrayList<>();
    Span span1 = new Span(keywordTestConstants.ABSTRACT, 26, 37, "gain weight", "gain weight");
    list.add(span1);
    Attribute[] schemaAttributes = new Attribute[keywordTestConstants.ATTRIBUTES_MEDLINE.length + 1];
    for (int count = 0; count < schemaAttributes.length - 1; count++) {
        schemaAttributes[count] = keywordTestConstants.ATTRIBUTES_MEDLINE[count];
    }
    schemaAttributes[schemaAttributes.length - 1] = new Attribute(RESULTS, AttributeType.LIST);
    IField[] fields = { new IntegerField(4566015), new TextField(""), new TextField("Significance of milk pH in newborn infants."), new TextField("V C Harrison, G Peat"), new StringField("4-5839 Dec 2, 1972"), new TextField("British medical journal"), new TextField(""), new TextField("Infant Nutritional Physiological Phenomena, Infant, Newborn, Milk"), new TextField("Bottle-fed infants do not gain weight as rapidly as breast-fed babies during the first week of life. This " + "weight lag can be corrected by the addition of a small amount of alkali (sodium bicarbonate or trometamol) to " + "the feeds. The alkali corrects the acidity of cow's milk which now assumes some of the properties of human breast " + "milk. It has a bacteriostatic effect on specific Escherichia coli in vitro, and in infants it produces a stool with" + " a preponderance of lactobacilli over E. coli organisms. When alkali is removed from the milk there is a decrease in" + " the weight of an infant and the stools contain excessive numbers of E. coli bacteria.A pH-corrected milk appears to" + " be more physiological than unaltered cow's milk and may provide some protection against gastroenteritis in early " + "life. Its bacteriostatic effect on specific E. coli may be of practical significance in feed preparations where " + "terminal sterilization and refrigeration are not available. The study was conducted during the week after birth, and " + "no conclusions are derived for older infants. The long-term effects of trometamol are unknown. No recommendation can " + "be given for the addition of sodium bicarbonate to milks containing a higher content of sodium."), new DoubleField(0.667832788), new ListField<>(list) };
    Tuple tuple1 = new Tuple(new Schema(schemaAttributes), fields);
    List<Tuple> expectedResultList = new ArrayList<>();
    expectedResultList.add(tuple1);
    List<Tuple> results = KeywordTestHelper.getQueryResults(MEDLINE_TABLE, query, attributeNames, phrase);
    // Perform Check
    boolean contains = TestUtils.equals(expectedResultList, results);
    Assert.assertTrue(contains);
}
Also used : Attribute(edu.uci.ics.textdb.api.schema.Attribute) Schema(edu.uci.ics.textdb.api.schema.Schema) ArrayList(java.util.ArrayList) IntegerField(edu.uci.ics.textdb.api.field.IntegerField) IField(edu.uci.ics.textdb.api.field.IField) Span(edu.uci.ics.textdb.api.span.Span) StringField(edu.uci.ics.textdb.api.field.StringField) TextField(edu.uci.ics.textdb.api.field.TextField) DoubleField(edu.uci.ics.textdb.api.field.DoubleField) Tuple(edu.uci.ics.textdb.api.tuple.Tuple) Test(org.junit.Test)

Example 44 with Attribute

use of edu.uci.ics.textdb.api.schema.Attribute in project textdb by TextDB.

the class JoinTestHelper method alterField.

/**
     * Alter a field of a tuple. ( The schema will also be changed accordingly. )
     * @param originalTuple
     * @param fieldIndex
     * @param newField
     * @return
     */
public static Tuple alterField(Tuple originalTuple, int fieldIndex, IField newField) {
    List<Attribute> originalAttributes = originalTuple.getSchema().getAttributes();
    List<Attribute> newAttributes = new ArrayList<>();
    List<IField> newFields = new ArrayList<>();
    for (int i = 0; i < originalAttributes.size(); i++) {
        if (i == fieldIndex) {
            newAttributes.add(new Attribute(originalAttributes.get(i).getAttributeName(), DataflowUtils.getAttributeType(newField)));
            newFields.add(newField);
        } else {
            newAttributes.add(originalAttributes.get(i));
            newFields.add(originalTuple.getField(i));
        }
    }
    return new Tuple(new Schema(newAttributes.stream().toArray(Attribute[]::new)), newFields.stream().toArray(IField[]::new));
}
Also used : Attribute(edu.uci.ics.textdb.api.schema.Attribute) Schema(edu.uci.ics.textdb.api.schema.Schema) ArrayList(java.util.ArrayList) IField(edu.uci.ics.textdb.api.field.IField) Tuple(edu.uci.ics.textdb.api.tuple.Tuple)

Example 45 with Attribute

use of edu.uci.ics.textdb.api.schema.Attribute in project textdb by TextDB.

the class DictionaryMatcherTest method testStopWordsInQueryUsingPhrase.

/**
     * Scenario S-14:verifies: Query with Stop Words match corresponding phrases
     * in the document using PHRASE OPERATOR.
     */
@Test
public void testStopWordsInQueryUsingPhrase() throws Exception {
    ArrayList<String> names = new ArrayList<String>(Arrays.asList("lin and is angry"));
    Dictionary dictionary = new Dictionary(names);
    // create a data tuple first
    List<Span> list = new ArrayList<>();
    Span span = new Span("description", 25, 45, "lin and is angry", "lin clooney is Angry");
    list.add(span);
    Attribute[] schemaAttributes = new Attribute[TestConstants.ATTRIBUTES_PEOPLE.length + 1];
    for (int count = 0; count < schemaAttributes.length - 1; count++) {
        schemaAttributes[count] = TestConstants.ATTRIBUTES_PEOPLE[count];
    }
    schemaAttributes[schemaAttributes.length - 1] = RESULTS_ATTRIBUTE;
    IField[] fields1 = { new StringField("george lin lin"), new StringField("lin clooney"), new IntegerField(43), new DoubleField(6.06), new DateField(new SimpleDateFormat("MM-dd-yyyy").parse("01-13-1973")), new TextField("Lin Clooney is Short and lin clooney is Angry"), new ListField<Span>(list) };
    Tuple tuple1 = new Tuple(new Schema(schemaAttributes), fields1);
    List<Tuple> expectedResults = new ArrayList<Tuple>();
    expectedResults.add(tuple1);
    List<String> attributeNames = Arrays.asList(TestConstants.FIRST_NAME, TestConstants.LAST_NAME, TestConstants.DESCRIPTION);
    List<Tuple> returnedResults = DictionaryMatcherTestHelper.getQueryResults(PEOPLE_TABLE, dictionary, attributeNames, KeywordMatchingType.PHRASE_INDEXBASED);
    boolean contains = TestUtils.equals(expectedResults, returnedResults);
    Assert.assertTrue(contains);
}
Also used : Dictionary(edu.uci.ics.textdb.exp.dictionarymatcher.Dictionary) Attribute(edu.uci.ics.textdb.api.schema.Attribute) Schema(edu.uci.ics.textdb.api.schema.Schema) ArrayList(java.util.ArrayList) IntegerField(edu.uci.ics.textdb.api.field.IntegerField) IField(edu.uci.ics.textdb.api.field.IField) Span(edu.uci.ics.textdb.api.span.Span) StringField(edu.uci.ics.textdb.api.field.StringField) TextField(edu.uci.ics.textdb.api.field.TextField) DateField(edu.uci.ics.textdb.api.field.DateField) SimpleDateFormat(java.text.SimpleDateFormat) DoubleField(edu.uci.ics.textdb.api.field.DoubleField) Tuple(edu.uci.ics.textdb.api.tuple.Tuple) Test(org.junit.Test)

Aggregations

Attribute (edu.uci.ics.textdb.api.schema.Attribute)118 ArrayList (java.util.ArrayList)94 Schema (edu.uci.ics.textdb.api.schema.Schema)93 Test (org.junit.Test)88 IField (edu.uci.ics.textdb.api.field.IField)87 Tuple (edu.uci.ics.textdb.api.tuple.Tuple)85 TextField (edu.uci.ics.textdb.api.field.TextField)74 Span (edu.uci.ics.textdb.api.span.Span)69 StringField (edu.uci.ics.textdb.api.field.StringField)61 IntegerField (edu.uci.ics.textdb.api.field.IntegerField)58 DoubleField (edu.uci.ics.textdb.api.field.DoubleField)57 DateField (edu.uci.ics.textdb.api.field.DateField)54 SimpleDateFormat (java.text.SimpleDateFormat)53 Dictionary (edu.uci.ics.textdb.exp.dictionarymatcher.Dictionary)23 ListField (edu.uci.ics.textdb.api.field.ListField)14 AttributeType (edu.uci.ics.textdb.api.schema.AttributeType)9 List (java.util.List)7 DataFlowException (edu.uci.ics.textdb.api.exception.DataFlowException)6 Collectors (java.util.stream.Collectors)6 SchemaConstants (edu.uci.ics.textdb.api.constants.SchemaConstants)5