Examples with IParameters edu.ucsf.rbvi.clusterMaker2.internal.algorithms.networkClusterers.TransClust.de.layclust.layout.IParameters used on opensource projects

Example 16 with IParameters

use of edu.ucsf.rbvi.clusterMaker2.internal.algorithms.networkClusterers.TransClust.de.layclust.layout.IParameters in project clusterMaker2 by RBVI.

the class ParameterTraining_SE method createInitialParameterGeneration.

private IParameters[] createInitialParameterGeneration() {
    // create enough random configurations to start with
    int initialSize = this.generationSize + 10;
    IParameters[] paramsGen = new IParameters[initialSize];
    IParameters param;
    /* get parameters from config */
    param = layouterEnum.createIParameters();
    param.readParametersFromConfig();
    paramsGen[0] = param;
    /*
		 * get the best parameter configuration for the previous training round
		 * if it exists.
		 */
    if (this.bestPreviousIParameters != null) {
        paramsGen[1] = bestPreviousIParameters;
    } else {
        param = layouterEnum.createIParameters();
        param.createRandomConfiguration();
        paramsGen[1] = param;
    }
    for (int i = 2; i < initialSize; i++) {
        param = layouterEnum.createIParameters();
        param.createRandomConfiguration();
        paramsGen[i] = param;
    }
    return paramsGen;
}