Examples with DescriptiveDataSet eu.etaxonomy.cdm.model.description.DescriptiveDataSet used on opensource projects

Example 16 with DescriptiveDataSet

use of eu.etaxonomy.cdm.model.description.DescriptiveDataSet in project cdmlib by cybertaxonomy.

the class DescriptiveDataSetService method removeDescription.

@Override
@Transactional(readOnly = false)
public DeleteResult removeDescription(UUID descriptionUuid, UUID descriptiveDataSetUuid, RemoveDescriptionsFromDescriptiveDataSetConfigurator config) {
    DeleteResult result = new DeleteResult();
    DescriptiveDataSet dataSet = load(descriptiveDataSetUuid);
    DescriptionBase<?> descriptionBase = descriptionService.load(descriptionUuid);
    if (dataSet == null || descriptionBase == null) {
        result.setError();
    } else {
        removeDescriptionFromDataSet(result, dataSet, descriptionBase, config);
    }
    return result;
}

Example 17 with DescriptiveDataSet

use of eu.etaxonomy.cdm.model.description.DescriptiveDataSet in project cdmlib by cybertaxonomy.

the class DescriptiveDataSetService method createTaxonDescription.

@Override
@Transactional(readOnly = false)
public TaxonRowWrapperDTO createTaxonDescription(UUID dataSetUuid, UUID taxonNodeUuid, DescriptionType descriptionType) {
    DescriptiveDataSet dataSet = load(dataSetUuid);
    TaxonNode taxonNode = taxonNodeService.load(taxonNodeUuid, Arrays.asList("taxon"));
    TaxonDescription newTaxonDescription = TaxonDescription.NewInstance(taxonNode.getTaxon());
    // $NON-NLS-2$
    newTaxonDescription.setTitleCache(dataSet.getLabel() + ": " + newTaxonDescription.generateTitle(), true);
    newTaxonDescription.getTypes().add(descriptionType);
    dataSet.addDescription(newTaxonDescription);
    saveOrUpdate(dataSet);
    return createTaxonRowWrapper(newTaxonDescription.getUuid(), dataSet.getUuid());
}

Example 18 with DescriptiveDataSet

use of eu.etaxonomy.cdm.model.description.DescriptiveDataSet in project cdmlib by cybertaxonomy.

the class DescriptiveDataSetService method createTaxonRowWrapper.

@Override
public TaxonRowWrapperDTO createTaxonRowWrapper(DescriptionBaseDto description, UUID descriptiveDataSetUuid) {
    Classification classification = null;
    DescriptiveDataSet descriptiveDataSet = dao.load(descriptiveDataSetUuid, null);
    Optional<TaxonNode> first = descriptiveDataSet.getTaxonSubtreeFilter().stream().filter(node -> node.getClassification() != null).findFirst();
    Optional<Classification> classificationOptional = first.map(node -> node.getClassification());
    Set<DescriptionBaseDto> descriptions = new HashSet<>();
    TaxonNodeDto nodeDto = null;
    if (classificationOptional.isPresent()) {
        classification = classificationOptional.get();
        nodeDto = taxonNodeService.dto(description.getTaxonDto().getUuid(), classification.getUuid());
    }
    return new TaxonRowWrapperDTO(description, nodeDto, descriptions);
}

Example 19 with DescriptiveDataSet

use of eu.etaxonomy.cdm.model.description.DescriptiveDataSet in project cdmlib by cybertaxonomy.

the class DescriptionServiceImpl method deleteDescription.

@Override
@Transactional(readOnly = false)
public DeleteResult deleteDescription(DescriptionBase<?> description) {
    DeleteResult deleteResult = new DeleteResult();
    if (description == null) {
        return deleteResult;
    }
    // avoid lazy init exception
    description = load(description.getId(), Arrays.asList("descriptiveDataSets"));
    deleteResult = isDeletable(description.getUuid());
    if (deleteResult.getRelatedObjects() != null && deleteResult.getRelatedObjects().size() == 1) {
        Iterator<CdmBase> relObjects = deleteResult.getRelatedObjects().iterator();
        CdmBase next = relObjects.next();
        if (next instanceof CdmLinkSource) {
            CdmLinkSource source = (CdmLinkSource) next;
            ICdmTarget target = source.getTarget();
        }
    }
    if (deleteResult.isOk()) {
        CdmBase.deproxy(description);
        if (description instanceof TaxonDescription) {
            TaxonDescription taxDescription = (TaxonDescription) description;
            Taxon tax = taxDescription.getTaxon();
            if (tax != null) {
                tax.removeDescription(taxDescription, true);
                deleteResult.addUpdatedObject(tax);
            }
        } else if (description instanceof SpecimenDescription) {
            SpecimenDescription specimenDescription = (SpecimenDescription) description;
            SpecimenOrObservationBase<?> specimen = specimenDescription.getDescribedSpecimenOrObservation();
            if (specimen != null) {
                specimen.removeDescription(specimenDescription);
                deleteResult.addUpdatedObject(specimen);
            }
        }
        for (DescriptiveDataSet dataset : description.getDescriptiveDataSets()) {
            dataset.removeDescription(description);
        }
        dao.delete(description);
        deleteResult.addDeletedObject(description);
        deleteResult.setCdmEntity(description);
    } else {
        logger.info(deleteResult.getExceptions().toString());
    }
    return deleteResult;
}

Example 20 with DescriptiveDataSet

use of eu.etaxonomy.cdm.model.description.DescriptiveDataSet in project cdmlib by cybertaxonomy.

the class PolytomousKeyGeneratorTest method createDataSet.

private DescriptiveDataSet createDataSet() {
    DescriptiveDataSet dataset = DescriptiveDataSet.NewInstance();
    dataset.setDescriptiveSystem(createFeatureTree());
    for (TaxonDescription desc : taxa) {
        dataset.addDescription(desc);
    }
    return dataset;
}