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Example 51 with LinkedListAtomSet

use of fr.lirmm.graphik.graal.core.atomset.LinkedListAtomSet in project graal by graphik-team.

the class ProductivityChecker method isValidDependency.

// /////////////////////////////////////////////////////////////////////////
// 
// /////////////////////////////////////////////////////////////////////////
@Override
public boolean isValidDependency(Rule r1, Rule r2, Substitution s) {
    InMemoryAtomSet b1 = s.createImageOf(r1.getBody());
    InMemoryAtomSet h1 = s.createImageOf(r1.getHead());
    InMemoryAtomSet b2 = s.createImageOf(r2.getBody());
    InMemoryAtomSet h2 = s.createImageOf(r2.getHead());
    InMemoryAtomSet f = new LinkedListAtomSet();
    f.addAll(b1.iterator());
    f.addAll(h1.iterator());
    f.addAll(b2.iterator());
    return !AtomSetUtils.contains(f, h2);
}
Also used : InMemoryAtomSet(fr.lirmm.graphik.graal.api.core.InMemoryAtomSet) LinkedListAtomSet(fr.lirmm.graphik.graal.core.atomset.LinkedListAtomSet)

Example 52 with LinkedListAtomSet

use of fr.lirmm.graphik.graal.core.atomset.LinkedListAtomSet in project graal by graphik-team.

the class ChaseWithGRDAndUnfiers method next.

// /////////////////////////////////////////////////////////////////////////
// METHODS
// /////////////////////////////////////////////////////////////////////////
@Override
public void next() throws ChaseException {
    Rule rule, unifiedRule;
    Substitution unificator;
    Queue<Triple<Rule, Substitution, InMemoryAtomSet>> newQueue = new LinkedList<Triple<Rule, Substitution, InMemoryAtomSet>>();
    InMemoryAtomSet newAtomSet = new DefaultInMemoryGraphStore();
    try {
        while (!queue.isEmpty()) {
            Triple<Rule, Substitution, InMemoryAtomSet> pair = queue.poll();
            if (pair != null) {
                unificator = pair.getMiddle();
                InMemoryAtomSet part = pair.getRight();
                rule = pair.getLeft();
                if (LOGGER.isDebugEnabled()) {
                    LOGGER.debug("\nExecute rule: {} with unificator {}", rule, unificator);
                }
                unifiedRule = DefaultUnifierAlgorithm.getTargetVariablesSubstitution().createImageOf(rule);
                unifiedRule = unificator.createImageOf(unifiedRule);
                unifiedRule.getBody().removeAll(part);
                unificator = targetToSource(unificator);
                ConjunctiveQuery query = DefaultConjunctiveQueryFactory.instance().create(unifiedRule.getBody(), new LinkedList<Term>(unifiedRule.getFrontier()));
                if (LOGGER.isDebugEnabled()) {
                    LOGGER.debug("Rule to execute: {}", unifiedRule.toString());
                    LOGGER.debug("       -- Query: {}", query.toString());
                }
                // Get projections
                List<Substitution> projections = Iterators.toList(SmartHomomorphism.instance().execute(query, atomSet));
                try {
                    for (Substitution proj : projections) {
                        InMemoryAtomSet newFacts = proj.createImageOf(unifiedRule.getHead());
                        ConjunctiveQuery q = new DefaultConjunctiveQuery(newFacts);
                        if (!SmartHomomorphism.instance().execute(q, newAtomSet).hasNext()) {
                            // Existential variables instantiation added to proj
                            CloseableIterator<Atom> it = hc.apply(unifiedRule, proj, atomSet);
                            if (it.hasNext()) {
                                LinkedListAtomSet foundPart = new LinkedListAtomSet();
                                foundPart.addAll(it);
                                newAtomSet.addAll(foundPart);
                                // Makes the projection compatible with triggered rules unifiers
                                Substitution compatibleProj = targetToSource(proj);
                                for (Pair<Rule, Substitution> p : this.grd.getTriggeredRulesWithUnifiers(rule)) {
                                    Rule triggeredRule = p.getKey();
                                    Substitution u = p.getValue();
                                    if (u != null) {
                                        Substitution comp = unificator.compose(u);
                                        Substitution aggreg = compatibleProj.aggregate(comp);
                                        aggreg = forgetSource(aggreg);
                                        if (LOGGER.isDebugEnabled()) {
                                            LOGGER.debug("-- -- Dependency: {}", triggeredRule);
                                            LOGGER.debug("-- -- Substitution:{} ", compatibleProj);
                                            LOGGER.debug("-- -- Unificator: {}", u);
                                            LOGGER.debug("-- -- Aggregation: {}\n", aggreg);
                                        }
                                        if (aggreg != null) {
                                            newQueue.add(new ImmutableTriple<Rule, Substitution, InMemoryAtomSet>(triggeredRule, aggreg, foundPart));
                                        }
                                    }
                                }
                            }
                        }
                    }
                } catch (HomomorphismFactoryException e) {
                    throw new RuleApplicationException("Error during rule application", e);
                } catch (HomomorphismException e) {
                    throw new RuleApplicationException("Error during rule application", e);
                } catch (IteratorException e) {
                    throw new RuleApplicationException("Error during rule application", e);
                }
            }
        }
        queue = newQueue;
        atomSet.addAll(newAtomSet);
    } catch (Exception e) {
        e.printStackTrace();
        throw new ChaseException("An error occur pending saturation step.", e);
    }
}
Also used : IteratorException(fr.lirmm.graphik.util.stream.IteratorException) RuleApplicationException(fr.lirmm.graphik.graal.api.forward_chaining.RuleApplicationException) HomomorphismFactoryException(fr.lirmm.graphik.graal.api.homomorphism.HomomorphismFactoryException) HomomorphismException(fr.lirmm.graphik.graal.api.homomorphism.HomomorphismException) LinkedListAtomSet(fr.lirmm.graphik.graal.core.atomset.LinkedListAtomSet) Term(fr.lirmm.graphik.graal.api.core.Term) ChaseException(fr.lirmm.graphik.graal.api.forward_chaining.ChaseException) LinkedList(java.util.LinkedList) Atom(fr.lirmm.graphik.graal.api.core.Atom) HomomorphismFactoryException(fr.lirmm.graphik.graal.api.homomorphism.HomomorphismFactoryException) RuleApplicationException(fr.lirmm.graphik.graal.api.forward_chaining.RuleApplicationException) HomomorphismException(fr.lirmm.graphik.graal.api.homomorphism.HomomorphismException) ChaseException(fr.lirmm.graphik.graal.api.forward_chaining.ChaseException) IteratorException(fr.lirmm.graphik.util.stream.IteratorException) Triple(org.apache.commons.lang3.tuple.Triple) ImmutableTriple(org.apache.commons.lang3.tuple.ImmutableTriple) DefaultConjunctiveQuery(fr.lirmm.graphik.graal.core.DefaultConjunctiveQuery) Substitution(fr.lirmm.graphik.graal.api.core.Substitution) HashMapSubstitution(fr.lirmm.graphik.graal.core.HashMapSubstitution) InMemoryAtomSet(fr.lirmm.graphik.graal.api.core.InMemoryAtomSet) Rule(fr.lirmm.graphik.graal.api.core.Rule) DefaultInMemoryGraphStore(fr.lirmm.graphik.graal.core.atomset.graph.DefaultInMemoryGraphStore) ConjunctiveQuery(fr.lirmm.graphik.graal.api.core.ConjunctiveQuery) DefaultConjunctiveQuery(fr.lirmm.graphik.graal.core.DefaultConjunctiveQuery)

Aggregations

LinkedListAtomSet (fr.lirmm.graphik.graal.core.atomset.LinkedListAtomSet)52 InMemoryAtomSet (fr.lirmm.graphik.graal.api.core.InMemoryAtomSet)35 Atom (fr.lirmm.graphik.graal.api.core.Atom)28 LinkedList (java.util.LinkedList)19 Substitution (fr.lirmm.graphik.graal.api.core.Substitution)18 ConjunctiveQuery (fr.lirmm.graphik.graal.api.core.ConjunctiveQuery)17 Term (fr.lirmm.graphik.graal.api.core.Term)17 DefaultInMemoryGraphStore (fr.lirmm.graphik.graal.core.atomset.graph.DefaultInMemoryGraphStore)11 Theory (org.junit.experimental.theories.Theory)11 DefaultConjunctiveQuery (fr.lirmm.graphik.graal.core.DefaultConjunctiveQuery)9 Test (org.junit.Test)9 Variable (fr.lirmm.graphik.graal.api.core.Variable)8 DefaultConjunctiveQueryWithNegatedParts (fr.lirmm.graphik.graal.core.DefaultConjunctiveQueryWithNegatedParts)8 HomomorphismException (fr.lirmm.graphik.graal.api.homomorphism.HomomorphismException)7 Rule (fr.lirmm.graphik.graal.api.core.Rule)6 AtomSetException (fr.lirmm.graphik.graal.api.core.AtomSetException)5 SubstitutionIterator2AtomIterator (fr.lirmm.graphik.graal.core.stream.SubstitutionIterator2AtomIterator)5 SqlHomomorphism (fr.lirmm.graphik.graal.store.rdbms.homomorphism.SqlHomomorphism)5 Predicate (fr.lirmm.graphik.graal.api.core.Predicate)4 DefaultAtom (fr.lirmm.graphik.graal.core.DefaultAtom)4