Examples with MPart gov.sandia.n2a.eqset.MPart used on opensource projects

Example 31 with MPart

use of gov.sandia.n2a.eqset.MPart in project n2a by frothga.

the class ChangeVariable method apply.

public static void apply(List<String> path, String nameBefore, String nameAfter, MNode savedTree) {
    NodeBase parent = NodeBase.locateNode(path);
    if (parent == null)
        throw new CannotRedoException();
    NodeVariable nodeBefore = (NodeVariable) parent.child(nameBefore);
    if (nodeBefore == null)
        throw new CannotRedoException();
    PanelModel mep = PanelModel.instance;
    JTree tree = mep.panelEquations.tree;
    FilteredTreeModel model = (FilteredTreeModel) tree.getModel();
    FontMetrics fm = nodeBefore.getFontMetrics(tree);
    NodeVariable nodeAfter;
    if (nameBefore.equals(nameAfter)) {
        nodeAfter = nodeBefore;
        // Same as valueAfter. Sub-tree is not relevant here.
        nodeAfter.source.set(savedTree.get());
    } else {
        // Update database
        MPart mparent = parent.source;
        mparent.clear(nameBefore);
        mparent.set(nameAfter, "").merge(savedTree);
        MPart newPart = (MPart) mparent.child(nameAfter);
        MPart oldPart = (MPart) mparent.child(nameBefore);
        // Update GUI
        nodeAfter = (NodeVariable) parent.child(nameAfter);
        if (oldPart == null) {
            if (nodeAfter == null) {
                nodeAfter = nodeBefore;
                nodeAfter.source = newPart;
            } else {
                model.removeNodeFromParent(nodeBefore);
            }
        } else {
            if (nodeAfter == null) {
                int index = parent.getIndex(nodeBefore);
                nodeAfter = new NodeVariable(newPart);
                model.insertNodeIntoUnfiltered(nodeAfter, parent, index);
            }
            nodeBefore.build();
            nodeBefore.findConnections();
            if (nodeBefore.visible(model.filterLevel))
                model.nodeStructureChanged(nodeBefore);
            else
                parent.hide(nodeBefore, model, true);
        }
    }
    nodeAfter.build();
    nodeAfter.findConnections();
    nodeAfter.updateColumnWidths(fm);
    parent.updateTabStops(fm);
    parent.allNodesChanged(model);
    TreeNode[] nodePath = nodeAfter.getPath();
    mep.panelEquations.updateOrder(nodePath);
    mep.panelEquations.updateVisibility(nodePath);
}

Example 32 with MPart

use of gov.sandia.n2a.eqset.MPart in project n2a by frothga.

the class ChangeVariableToInherit method redo.

public void redo() {
    super.redo();
    NodePart parent = (NodePart) NodeBase.locateNode(path);
    if (parent == null)
        throw new CannotRedoException();
    // Update database
    MPart mparent = parent.source;
    mparent.clear(treeBefore.key());
    mparent.set("$inherit", valueAfter);
    // Update GUI
    PanelModel mep = PanelModel.instance;
    JTree tree = mep.panelEquations.tree;
    FilteredTreeModel model = (FilteredTreeModel) tree.getModel();
    parent.build();
    parent.findConnections();
    parent.filter(model.filterLevel);
    model.nodeStructureChanged(parent);
    TreeNode[] nodePath = parent.child("$inherit").getPath();
    mep.panelEquations.updateOrder(nodePath);
    mep.panelEquations.updateVisibility(nodePath);
}

Example 33 with MPart

use of gov.sandia.n2a.eqset.MPart in project n2a by frothga.

the class PanelEquationTree method loadRootFromDB.

public void loadRootFromDB(MNode doc) {
    if (record == doc)
        return;
    if (record != null) {
        tree.stopEditing();
        // Save tree state for current record, but only if it's better than the previously-saved state.
        if (focusCache.get(record) == null || tree.getSelectionPath() != null)
            focusCache.put(record, new StoredPath(tree));
    }
    record = doc;
    try {
        root = new NodePart(new MPart((MPersistent) record));
        root.build();
        root.findConnections();
        // triggers repaint, but may be too slow
        model.setRoot(root);
        updateLock();
        // next call to repaintSouth() will repaint everything
        needsFullRepaint = true;
        StoredPath sp = focusCache.get(record);
        if (sp == null) {
            tree.expandRow(0);
            tree.setSelectionRow(0);
        } else {
            sp.restore(tree);
        }
    } catch (Exception e) {
        System.err.println("Exception while parsing model: " + e);
        e.printStackTrace();
    }
}

Example 34 with MPart

use of gov.sandia.n2a.eqset.MPart in project n2a by frothga.

the class ExportJob method addSynapse.

public Synapse addSynapse(MPart source, boolean electrical) {
    Synapse s = new Synapse(source, electrical);
    int index = synapses.indexOf(s);
    if (index >= 0)
        s = synapses.get(index);
    else
        synapses.add(s);
    // Check for chained synapse (embedded input)
    MPart A = (MPart) source.child("A");
    if (A == null || A.size() == 0)
        return s;
    Synapse s2 = new Synapse(s.id, A);
    index = synapses.indexOf(s2);
    if (index >= 0)
        s2 = synapses.get(index);
    else
        synapses.add(s2);
    return s2;
}

Example 35 with MPart

use of gov.sandia.n2a.eqset.MPart in project n2a by frothga.

the class ExportJob method process.

public void process(MPart source) {
    if (source.get("$metadata", "backend.lems.part").isEmpty()) {
        for (EquationSet p : equations.parts) topLevelPart((MPart) p.source);
    } else {
        topLevelPart(source);
    }
    for (IonChannel ic : channels) ic.append();
    for (Synapse s : synapses) s.append();
    // Collate
    Element root = doc.createElement("neuroml");
    root.setAttribute("id", modelName);
    root.setAttribute("xmlns", "http://www.neuroml.org/schema/neuroml2");
    root.setAttribute("xmlns:xsi", "http://www.w3.org/2001/XMLSchema-instance");
    root.setAttribute("xsi:schemaLocation", "http://www.neuroml.org/schema/neuroml2 ../Schemas/NeuroML2/NeuroML_v2beta4.xsd");
    sequencer.append(root, elements);
    doc.appendChild(root);
}