Examples with LineReader htsjdk.tribble.readers.LineReader used on opensource projects

Example 6 with LineReader

use of htsjdk.tribble.readers.LineReader in project gatk by broadinstitute.

the class TableCodecUnitTest method testDecodeComment.

@Test
public void testDecodeComment() {
    TableCodec tc = new TableCodec();
    LineReader reader = makeReader(asList("#HEADER a b c", "HEADER d e f"));
    LineIterator li = new LineIteratorImpl(reader);
    List<String> hd = tc.readActualHeader(li);
    Assert.assertEquals(hd, asList("HEADER", "d", "e", "f"));
}