Examples with JTableHeader javax.swing.table.JTableHeader used on opensource projects

Example 96 with JTableHeader

use of javax.swing.table.JTableHeader in project mars-sim by mars-sim.

the class DefaultTableHeaderCellRenderer method getTableCellRendererComponent.

/**
 * Returns the default table header cell renderer.
 * <P>
 * If the column is sorted, the approapriate icon is retrieved from the
 * current Look and Feel, and a border appropriate to a table header cell
 * is applied.
 * <P>
 * Subclasses may overide this method to provide custom content or
 * formatting.
 *
 * @param table the <code>JTable</code>.
 * @param value the value to assign to the header cell
 * @param isSelected This parameter is ignored.
 * @param hasFocus This parameter is ignored.
 * @param row This parameter is ignored.
 * @param column the column of the header cell to render
 * @return the default table header cell renderer
 */
@Override
public Component getTableCellRendererComponent(JTable table, Object value, boolean isSelected, boolean hasFocus, int row, int column) {
    super.getTableCellRendererComponent(table, value, isSelected, hasFocus, row, column);
    JTableHeader tableHeader = table.getTableHeader();
    if (tableHeader != null) {
        setForeground(tableHeader.getForeground());
        // new Color(205, 133, 63));//Color.ORANGE);
        setBackground(tableHeader.getBackground());
        setForeground(new Color(255, 255, 120));
    }
    // TableStyle.setTableStyle(table);
    setIcon(getIcon(table, column));
    setBorder(UIManager.getBorder("TableHeader.cellBorder"));
    return this;
}

Example 97 with JTableHeader

use of javax.swing.table.JTableHeader in project spotbugs by spotbugs.

the class MainFrameTree method bugListPanel.

public JPanel bugListPanel() {
    tableheader = new JTableHeader();
    getTableheader().setCursor(Cursor.getPredefinedCursor(Cursor.W_RESIZE_CURSOR));
    // Listener put here for when user double clicks on sorting
    // column header SorterDialog appears.
    getTableheader().addMouseListener(new MouseAdapter() {

        @Override
        public void mouseClicked(MouseEvent e) {
            Debug.println("tableheader.getReorderingAllowed() = " + getTableheader().getReorderingAllowed());
            if (!getTableheader().getReorderingAllowed()) {
                return;
            }
            if (e.getClickCount() == 2) {
                SorterDialog.getInstance().setVisible(true);
            }
        }

        @Override
        public void mouseReleased(MouseEvent arg0) {
            if (!getTableheader().getReorderingAllowed()) {
                return;
            }
            BugTreeModel bt = (BugTreeModel) (getTree().getModel());
            bt.checkSorter();
        }
    });
    sorter = GUISaveState.getInstance().getStarterTable();
    getTableheader().setColumnModel(getSorter());
    getTableheader().setToolTipText(edu.umd.cs.findbugs.L10N.getLocalString("tooltip.reorder_message", "Drag to reorder tree folder and sort order"));
    tree = new JTree();
    getTree().setLargeModel(true);
    getTree().getSelectionModel().setSelectionMode(TreeSelectionModel.SINGLE_TREE_SELECTION);
    getTree().setCellRenderer(new BugRenderer());
    getTree().setRowHeight((int) (Driver.getFontSize() + 7));
    getTree().setModel(new BugTreeModel(mainFrame, getTree(), getSorter(), new BugSet(new ArrayList<BugLeafNode>())));
    setupTreeListeners();
    mainFrame.setProject(new Project());
    treeScrollPane = new JScrollPane(getTree());
    treePanel = new JPanel(new BorderLayout());
    treePanel.add(treeScrollPane, BorderLayout.CENTER);
    JTable t = new JTable(new DefaultTableModel(0, sortables().length));
    t.setTableHeader(getTableheader());
    textFieldForPackagesToDisplay = new JTextField();
    ActionListener filterAction = e -> {
        try {
            String text = textFieldForPackagesToDisplay.getText();
            if (text.indexOf('/') >= 0) {
                text = text.replace('/', '.');
                textFieldForPackagesToDisplay.setText(text);
            }
            mainFrame.getViewFilter().setPackagesToDisplay(text);
            mainFrame.resetViewCache();
        } catch (IllegalArgumentException err) {
            JOptionPane.showMessageDialog(mainFrame, err.getMessage(), "Bad class search string", JOptionPane.ERROR_MESSAGE);
        }
    };
    textFieldForPackagesToDisplay.addActionListener(filterAction);
    JButton filterButton = new JButton("Filter");
    filterButton.addActionListener(filterAction);
    JPanel filterPanel = new JPanel();
    filterPanel.setLayout(new GridBagLayout());
    GridBagConstraints gbc = new GridBagConstraints();
    gbc.weightx = 1;
    gbc.fill = GridBagConstraints.BOTH;
    gbc.gridy = 1;
    filterPanel.add(textFieldForPackagesToDisplay, gbc);
    gbc.weightx = 0;
    gbc.fill = GridBagConstraints.NONE;
    filterPanel.add(filterButton, gbc);
    filterPanel.setToolTipText("Only show classes containing the word(s) you specify");
    JPanel sortablePanel = new JPanel(new GridBagLayout());
    JLabel sortableLabel = new JLabel("Group bugs by:");
    sortableLabel.setLabelFor(getTableheader());
    gbc = new GridBagConstraints();
    gbc.weightx = 0;
    gbc.gridy = 1;
    gbc.insets = new Insets(3, 3, 3, 3);
    gbc.fill = GridBagConstraints.BOTH;
    sortablePanel.add(sortableLabel, gbc);
    gbc.weightx = 1;
    sortablePanel.add(getTableheader(), gbc);
    getTableheader().setBorder(new LineBorder(Color.BLACK));
    JPanel topPanel = makeNavigationPanel("Class name filter:", filterPanel, sortablePanel, treePanel);
    cardPanel = new JPanel(new CardLayout());
    JPanel waitPanel = new JPanel();
    waitPanel.setLayout(new BoxLayout(waitPanel, BoxLayout.Y_AXIS));
    waitPanel.add(new JLabel("Please wait..."));
    waitStatusLabel = new JLabel();
    waitPanel.add(waitStatusLabel);
    cardPanel.add(topPanel, MainFrame.BugCard.TREECARD.name());
    cardPanel.add(waitPanel, MainFrame.BugCard.WAITCARD.name());
    return cardPanel;
}

Example 98 with JTableHeader

use of javax.swing.table.JTableHeader in project spotbugs by spotbugs.

the class SorterDialog method createSorterPane.

/**
 * Creates JPanel with checkboxes of different things to sort by. List is:
 * priority, class, package, category, bugcode, status, and type.
 */
private JPanel createSorterPane() {
    JPanel insidePanel = new JPanel();
    insidePanel.setLayout(new GridBagLayout());
    preview = new JTableHeader();
    Sortables[] sortables = MainFrame.getInstance().getAvailableSortables();
    preview.setColumnModel(new SorterTableColumnModel(sortables));
    for (Sortables s : sortables) {
        if (s != Sortables.DIVIDER) {
            checkBoxSortList.add(new SortableCheckBox(s));
        }
    }
    setSorterCheckBoxes();
    GridBagConstraints gbc = new GridBagConstraints();
    gbc.fill = GridBagConstraints.BOTH;
    gbc.gridx = 1;
    gbc.insets = new Insets(2, 5, 2, 5);
    insidePanel.add(new JLabel("<html><h2>1. Choose bug properties"), gbc);
    insidePanel.add(new CheckBoxList<>(checkBoxSortList.toArray(new JCheckBox[checkBoxSortList.size()])), gbc);
    JTable t = new JTable(new DefaultTableModel(0, sortables.length));
    t.setTableHeader(preview);
    preview.setCursor(Cursor.getPredefinedCursor(Cursor.W_RESIZE_CURSOR));
    insidePanel.add(new JLabel("<html><h2>2. Drag and drop to change grouping priority"), gbc);
    insidePanel.add(createAppropriatelySizedScrollPane(t), gbc);
    sortApply = new JButton(edu.umd.cs.findbugs.L10N.getLocalString("dlg.apply_btn", "Apply"));
    sortApply.addActionListener(e -> {
        MainFrame.getInstance().getSorter().createFrom((SorterTableColumnModel) preview.getColumnModel());
        ((BugTreeModel) MainFrame.getInstance().getTree().getModel()).checkSorter();
        SorterDialog.this.dispose();
    });
    gbc.fill = GridBagConstraints.NONE;
    insidePanel.add(sortApply, gbc);
    JPanel sorter = new JPanel();
    sorter.setLayout(new BorderLayout());
    sorter.add(new JScrollPane(insidePanel), BorderLayout.CENTER);
    return sorter;
}

Example 99 with JTableHeader

use of javax.swing.table.JTableHeader in project peptide-shaker by compomics.

the class ProteinStructurePanel method initComponents.

/**
 * This method is called from within the constructor to initialize the form.
 * WARNING: Do NOT modify this code. The content of this method is always
 * regenerated by the Form Editor.
 */
@SuppressWarnings("unchecked")
private // <editor-fold defaultstate="collapsed" desc="Generated Code">//GEN-BEGIN:initComponents
void initComponents() {
    pdbStructureJPanel = new javax.swing.JPanel();
    pdbStructureLayeredPane = new javax.swing.JLayeredPane();
    pdbOuterPanel = new javax.swing.JPanel();
    pdbLayeredPane = new javax.swing.JLayeredPane();
    pdbPanel = new javax.swing.JPanel();
    labelsJButton = new javax.swing.JButton();
    ribbonJButton = new javax.swing.JButton();
    backboneJButton = new javax.swing.JButton();
    playJButton = new javax.swing.JButton();
    pdbStructureHelpJButton = new javax.swing.JButton();
    exportPdbStructureJButton = new javax.swing.JButton();
    contextMenuPdbStructureBackgroundPanel = new javax.swing.JPanel();
    proteinsJPanel = new javax.swing.JPanel();
    proteinsLayeredPane = new javax.swing.JLayeredPane();
    proteinsPanel = new javax.swing.JPanel();
    proteinScrollPane = new javax.swing.JScrollPane();
    proteinTable = new JTable() {

        protected JTableHeader createDefaultTableHeader() {
            return new JTableHeader(columnModel) {

                public String getToolTipText(MouseEvent e) {
                    java.awt.Point p = e.getPoint();
                    int index = columnModel.getColumnIndexAtX(p.x);
                    int realIndex = columnModel.getColumn(index).getModelIndex();
                    String tip = (String) proteinTableToolTips.get(realIndex);
                    return tip;
                }
            };
        }
    };
    proteinsHelpJButton = new javax.swing.JButton();
    exportProteinsJButton = new javax.swing.JButton();
    contextMenuProteinsBackgroundPanel = new javax.swing.JPanel();
    peptidesJPanel = new javax.swing.JPanel();
    peptidesLayeredPane = new javax.swing.JLayeredPane();
    peptidesPanel = new javax.swing.JPanel();
    peptideScrollPane = new javax.swing.JScrollPane();
    peptideTable = new JTable() {

        protected JTableHeader createDefaultTableHeader() {
            return new JTableHeader(columnModel) {

                public String getToolTipText(MouseEvent e) {
                    java.awt.Point p = e.getPoint();
                    int index = columnModel.getColumnIndexAtX(p.x);
                    int realIndex = columnModel.getColumn(index).getModelIndex();
                    String tip = (String) peptideTableToolTips.get(realIndex);
                    return tip;
                }
            };
        }
    };
    peptidesHelpJButton = new javax.swing.JButton();
    exportPeptidesJButton = new javax.swing.JButton();
    contextMenuPeptidesBackgroundPanel = new javax.swing.JPanel();
    pdbMatchesJPanel = new javax.swing.JPanel();
    pdbMatchesLayeredPane = new javax.swing.JLayeredPane();
    pdbMatchesPanel = new javax.swing.JPanel();
    pdbJScrollPane = new javax.swing.JScrollPane();
    pdbMatchesJTable = new JTable() {

        protected JTableHeader createDefaultTableHeader() {
            return new JTableHeader(columnModel) {

                public String getToolTipText(MouseEvent e) {
                    java.awt.Point p = e.getPoint();
                    int index = columnModel.getColumnIndexAtX(p.x);
                    int realIndex = columnModel.getColumn(index).getModelIndex();
                    String tip = (String) pdbTableToolTips.get(realIndex);
                    return tip;
                }
            };
        }
    };
    pdbMatchesHelpJButton = new javax.swing.JButton();
    exportPdbMatchesJButton = new javax.swing.JButton();
    contextMenuPdbMatchesBackgroundPanel = new javax.swing.JPanel();
    pdbChainsJPanel = new javax.swing.JPanel();
    pdbChainsLayeredPane = new javax.swing.JLayeredPane();
    pdbChainsPanel = new javax.swing.JPanel();
    pdbChainsJScrollPane = new javax.swing.JScrollPane();
    pdbChainsJTable = new JTable() {

        protected JTableHeader createDefaultTableHeader() {
            return new JTableHeader(columnModel) {

                public String getToolTipText(MouseEvent e) {
                    java.awt.Point p = e.getPoint();
                    int index = columnModel.getColumnIndexAtX(p.x);
                    int realIndex = columnModel.getColumn(index).getModelIndex();
                    String tip = (String) pdbChainsTableToolTips.get(realIndex);
                    return tip;
                }
            };
        }
    };
    pdbChainHelpJButton = new javax.swing.JButton();
    exportPdbChainsJButton = new javax.swing.JButton();
    contextMenuPdbChainsBackgroundPanel = new javax.swing.JPanel();
    setBackground(new java.awt.Color(255, 255, 255));
    addComponentListener(new java.awt.event.ComponentAdapter() {

        public void componentResized(java.awt.event.ComponentEvent evt) {
            formComponentResized(evt);
        }
    });
    pdbStructureJPanel.setOpaque(false);
    pdbOuterPanel.setBorder(javax.swing.BorderFactory.createTitledBorder("PDB Structure"));
    pdbOuterPanel.setOpaque(false);
    pdbLayeredPane.addComponentListener(new java.awt.event.ComponentAdapter() {

        public void componentResized(java.awt.event.ComponentEvent evt) {
            pdbLayeredPaneComponentResized(evt);
        }
    });
    pdbPanel.setLayout(new javax.swing.BoxLayout(pdbPanel, javax.swing.BoxLayout.LINE_AXIS));
    pdbPanel.setBounds(0, 0, 435, 440);
    pdbLayeredPane.add(pdbPanel, javax.swing.JLayeredPane.DEFAULT_LAYER);
    // NOI18N
    labelsJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/labels_selected.png")));
    labelsJButton.setToolTipText("Hide Modification Labels");
    labelsJButton.setBorder(null);
    labelsJButton.setBorderPainted(false);
    labelsJButton.setContentAreaFilled(false);
    labelsJButton.setFocusable(false);
    labelsJButton.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER);
    labelsJButton.setVerticalTextPosition(javax.swing.SwingConstants.BOTTOM);
    labelsJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            labelsJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            labelsJButtonMouseExited(evt);
        }
    });
    labelsJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            labelsJButtonActionPerformed(evt);
        }
    });
    labelsJButton.setBounds(0, 0, 25, 25);
    pdbLayeredPane.add(labelsJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    // NOI18N
    ribbonJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/ribbon_selected.png")));
    ribbonJButton.setToolTipText("Ribbon Model");
    ribbonJButton.setBorder(null);
    ribbonJButton.setBorderPainted(false);
    ribbonJButton.setContentAreaFilled(false);
    ribbonJButton.setFocusable(false);
    ribbonJButton.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER);
    ribbonJButton.setVerticalTextPosition(javax.swing.SwingConstants.BOTTOM);
    ribbonJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            ribbonJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            ribbonJButtonMouseExited(evt);
        }
    });
    ribbonJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            ribbonJButtonActionPerformed(evt);
        }
    });
    ribbonJButton.setBounds(0, 0, 25, 25);
    pdbLayeredPane.add(ribbonJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    // NOI18N
    backboneJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/backbone.png")));
    backboneJButton.setToolTipText("Backbone Model");
    backboneJButton.setBorder(null);
    backboneJButton.setBorderPainted(false);
    backboneJButton.setContentAreaFilled(false);
    backboneJButton.setFocusable(false);
    backboneJButton.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER);
    backboneJButton.setVerticalTextPosition(javax.swing.SwingConstants.BOTTOM);
    backboneJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            backboneJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            backboneJButtonMouseExited(evt);
        }
    });
    backboneJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            backboneJButtonActionPerformed(evt);
        }
    });
    backboneJButton.setBounds(0, 0, 25, 25);
    pdbLayeredPane.add(backboneJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    // NOI18N
    playJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/pause.png")));
    playJButton.setToolTipText("Stop Rotation");
    playJButton.setBorder(null);
    playJButton.setBorderPainted(false);
    playJButton.setContentAreaFilled(false);
    playJButton.setFocusable(false);
    playJButton.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER);
    playJButton.setVerticalTextPosition(javax.swing.SwingConstants.BOTTOM);
    playJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            playJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            playJButtonMouseExited(evt);
        }
    });
    playJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            playJButtonActionPerformed(evt);
        }
    });
    playJButton.setBounds(0, 0, 21, 21);
    pdbLayeredPane.add(playJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    javax.swing.GroupLayout pdbOuterPanelLayout = new javax.swing.GroupLayout(pdbOuterPanel);
    pdbOuterPanel.setLayout(pdbOuterPanelLayout);
    pdbOuterPanelLayout.setHorizontalGroup(pdbOuterPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 448, Short.MAX_VALUE).addGroup(pdbOuterPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(pdbOuterPanelLayout.createSequentialGroup().addContainerGap().addComponent(pdbLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 428, Short.MAX_VALUE).addContainerGap())));
    pdbOuterPanelLayout.setVerticalGroup(pdbOuterPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 463, Short.MAX_VALUE).addGroup(pdbOuterPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(javax.swing.GroupLayout.Alignment.TRAILING, pdbOuterPanelLayout.createSequentialGroup().addContainerGap().addComponent(pdbLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 441, Short.MAX_VALUE).addContainerGap())));
    pdbOuterPanel.setBounds(0, 0, 460, 490);
    pdbStructureLayeredPane.add(pdbOuterPanel, javax.swing.JLayeredPane.DEFAULT_LAYER);
    // NOI18N
    pdbStructureHelpJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame_grey.png")));
    pdbStructureHelpJButton.setToolTipText("Help");
    pdbStructureHelpJButton.setBorder(null);
    pdbStructureHelpJButton.setBorderPainted(false);
    pdbStructureHelpJButton.setContentAreaFilled(false);
    // NOI18N
    pdbStructureHelpJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame.png")));
    pdbStructureHelpJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            pdbStructureHelpJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            pdbStructureHelpJButtonMouseExited(evt);
        }
    });
    pdbStructureHelpJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            pdbStructureHelpJButtonActionPerformed(evt);
        }
    });
    pdbStructureHelpJButton.setBounds(440, 0, 10, 19);
    pdbStructureLayeredPane.add(pdbStructureHelpJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    // NOI18N
    exportPdbStructureJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportPdbStructureJButton.setToolTipText("Export");
    exportPdbStructureJButton.setBorder(null);
    exportPdbStructureJButton.setBorderPainted(false);
    exportPdbStructureJButton.setContentAreaFilled(false);
    // NOI18N
    exportPdbStructureJButton.setDisabledIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportPdbStructureJButton.setEnabled(false);
    // NOI18N
    exportPdbStructureJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame.png")));
    exportPdbStructureJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            exportPdbStructureJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            exportPdbStructureJButtonMouseExited(evt);
        }
    });
    exportPdbStructureJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            exportPdbStructureJButtonActionPerformed(evt);
        }
    });
    exportPdbStructureJButton.setBounds(430, 0, 10, 19);
    pdbStructureLayeredPane.add(exportPdbStructureJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    contextMenuPdbStructureBackgroundPanel.setBackground(new java.awt.Color(255, 255, 255));
    javax.swing.GroupLayout contextMenuPdbStructureBackgroundPanelLayout = new javax.swing.GroupLayout(contextMenuPdbStructureBackgroundPanel);
    contextMenuPdbStructureBackgroundPanel.setLayout(contextMenuPdbStructureBackgroundPanelLayout);
    contextMenuPdbStructureBackgroundPanelLayout.setHorizontalGroup(contextMenuPdbStructureBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 30, Short.MAX_VALUE));
    contextMenuPdbStructureBackgroundPanelLayout.setVerticalGroup(contextMenuPdbStructureBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 19, Short.MAX_VALUE));
    contextMenuPdbStructureBackgroundPanel.setBounds(420, 0, 30, 19);
    pdbStructureLayeredPane.add(contextMenuPdbStructureBackgroundPanel, javax.swing.JLayeredPane.POPUP_LAYER);
    javax.swing.GroupLayout pdbStructureJPanelLayout = new javax.swing.GroupLayout(pdbStructureJPanel);
    pdbStructureJPanel.setLayout(pdbStructureJPanelLayout);
    pdbStructureJPanelLayout.setHorizontalGroup(pdbStructureJPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(pdbStructureLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 466, Short.MAX_VALUE));
    pdbStructureJPanelLayout.setVerticalGroup(pdbStructureJPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(pdbStructureLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 486, Short.MAX_VALUE));
    proteinsJPanel.setOpaque(false);
    proteinsPanel.setBorder(javax.swing.BorderFactory.createTitledBorder("Proteins"));
    proteinsPanel.setOpaque(false);
    proteinScrollPane.setOpaque(false);
    proteinTable.setModel(new ProteinTableModel());
    proteinTable.setOpaque(false);
    proteinTable.setSelectionMode(javax.swing.ListSelectionModel.SINGLE_SELECTION);
    proteinTable.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseClicked(java.awt.event.MouseEvent evt) {
            proteinTableMouseClicked(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            proteinTableMouseExited(evt);
        }

        public void mouseReleased(java.awt.event.MouseEvent evt) {
            proteinTableMouseReleased(evt);
        }
    });
    proteinTable.addMouseMotionListener(new java.awt.event.MouseMotionAdapter() {

        public void mouseMoved(java.awt.event.MouseEvent evt) {
            proteinTableMouseMoved(evt);
        }
    });
    proteinTable.addKeyListener(new java.awt.event.KeyAdapter() {

        public void keyReleased(java.awt.event.KeyEvent evt) {
            proteinTableKeyReleased(evt);
        }
    });
    proteinScrollPane.setViewportView(proteinTable);
    javax.swing.GroupLayout proteinsPanelLayout = new javax.swing.GroupLayout(proteinsPanel);
    proteinsPanel.setLayout(proteinsPanelLayout);
    proteinsPanelLayout.setHorizontalGroup(proteinsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 938, Short.MAX_VALUE).addGroup(proteinsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(proteinsPanelLayout.createSequentialGroup().addContainerGap().addComponent(proteinScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 918, Short.MAX_VALUE).addContainerGap())));
    proteinsPanelLayout.setVerticalGroup(proteinsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 243, Short.MAX_VALUE).addGroup(proteinsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(proteinsPanelLayout.createSequentialGroup().addContainerGap().addComponent(proteinScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 221, Short.MAX_VALUE).addContainerGap())));
    proteinsPanel.setBounds(0, 0, 950, 270);
    proteinsLayeredPane.add(proteinsPanel, javax.swing.JLayeredPane.DEFAULT_LAYER);
    // NOI18N
    proteinsHelpJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame_grey.png")));
    proteinsHelpJButton.setToolTipText("Help");
    proteinsHelpJButton.setBorder(null);
    proteinsHelpJButton.setBorderPainted(false);
    proteinsHelpJButton.setContentAreaFilled(false);
    // NOI18N
    proteinsHelpJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame.png")));
    proteinsHelpJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            proteinsHelpJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            proteinsHelpJButtonMouseExited(evt);
        }
    });
    proteinsHelpJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            proteinsHelpJButtonActionPerformed(evt);
        }
    });
    proteinsHelpJButton.setBounds(930, 0, 10, 19);
    proteinsLayeredPane.add(proteinsHelpJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    // NOI18N
    exportProteinsJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportProteinsJButton.setToolTipText("Copy to File");
    exportProteinsJButton.setBorder(null);
    exportProteinsJButton.setBorderPainted(false);
    exportProteinsJButton.setContentAreaFilled(false);
    // NOI18N
    exportProteinsJButton.setDisabledIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportProteinsJButton.setEnabled(false);
    // NOI18N
    exportProteinsJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame.png")));
    exportProteinsJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            exportProteinsJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            exportProteinsJButtonMouseExited(evt);
        }
    });
    exportProteinsJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            exportProteinsJButtonActionPerformed(evt);
        }
    });
    exportProteinsJButton.setBounds(920, 0, 10, 19);
    proteinsLayeredPane.add(exportProteinsJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    contextMenuProteinsBackgroundPanel.setBackground(new java.awt.Color(255, 255, 255));
    javax.swing.GroupLayout contextMenuProteinsBackgroundPanelLayout = new javax.swing.GroupLayout(contextMenuProteinsBackgroundPanel);
    contextMenuProteinsBackgroundPanel.setLayout(contextMenuProteinsBackgroundPanelLayout);
    contextMenuProteinsBackgroundPanelLayout.setHorizontalGroup(contextMenuProteinsBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 30, Short.MAX_VALUE));
    contextMenuProteinsBackgroundPanelLayout.setVerticalGroup(contextMenuProteinsBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 19, Short.MAX_VALUE));
    contextMenuProteinsBackgroundPanel.setBounds(920, 0, 30, 19);
    proteinsLayeredPane.add(contextMenuProteinsBackgroundPanel, javax.swing.JLayeredPane.POPUP_LAYER);
    javax.swing.GroupLayout proteinsJPanelLayout = new javax.swing.GroupLayout(proteinsJPanel);
    proteinsJPanel.setLayout(proteinsJPanelLayout);
    proteinsJPanelLayout.setHorizontalGroup(proteinsJPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(proteinsLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 957, Short.MAX_VALUE));
    proteinsJPanelLayout.setVerticalGroup(proteinsJPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(proteinsLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 273, Short.MAX_VALUE));
    peptidesJPanel.setOpaque(false);
    peptidesPanel.setBorder(javax.swing.BorderFactory.createTitledBorder("Peptides"));
    peptidesPanel.setOpaque(false);
    peptideScrollPane.setOpaque(false);
    peptideTable.setModel(new javax.swing.table.DefaultTableModel(new Object[][] {}, new String[] { " ", "  ", "PI", "Sequence", "Start", "PDB", "" }) {

        Class[] types = new Class[] { java.lang.Integer.class, java.lang.Boolean.class, java.lang.Integer.class, java.lang.String.class, java.lang.Integer.class, java.lang.Boolean.class, java.lang.Boolean.class };

        boolean[] canEdit = new boolean[] { false, true, false, false, false, false, false };

        public Class getColumnClass(int columnIndex) {
            return types[columnIndex];
        }

        public boolean isCellEditable(int rowIndex, int columnIndex) {
            return canEdit[columnIndex];
        }
    });
    peptideTable.setOpaque(false);
    peptideTable.setSelectionMode(javax.swing.ListSelectionModel.SINGLE_SELECTION);
    peptideTable.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseExited(java.awt.event.MouseEvent evt) {
            peptideTableMouseExited(evt);
        }

        public void mouseReleased(java.awt.event.MouseEvent evt) {
            peptideTableMouseReleased(evt);
        }
    });
    peptideTable.addMouseMotionListener(new java.awt.event.MouseMotionAdapter() {

        public void mouseMoved(java.awt.event.MouseEvent evt) {
            peptideTableMouseMoved(evt);
        }
    });
    peptideTable.addKeyListener(new java.awt.event.KeyAdapter() {

        public void keyReleased(java.awt.event.KeyEvent evt) {
            peptideTableKeyReleased(evt);
        }
    });
    peptideScrollPane.setViewportView(peptideTable);
    javax.swing.GroupLayout peptidesPanelLayout = new javax.swing.GroupLayout(peptidesPanel);
    peptidesPanel.setLayout(peptidesPanelLayout);
    peptidesPanelLayout.setHorizontalGroup(peptidesPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 468, Short.MAX_VALUE).addGroup(peptidesPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(peptidesPanelLayout.createSequentialGroup().addContainerGap().addComponent(peptideScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 448, Short.MAX_VALUE).addContainerGap())));
    peptidesPanelLayout.setVerticalGroup(peptidesPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 133, Short.MAX_VALUE).addGroup(peptidesPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(peptidesPanelLayout.createSequentialGroup().addContainerGap().addComponent(peptideScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 111, Short.MAX_VALUE).addContainerGap())));
    peptidesPanel.setBounds(0, 0, 480, 160);
    peptidesLayeredPane.add(peptidesPanel, javax.swing.JLayeredPane.DEFAULT_LAYER);
    // NOI18N
    peptidesHelpJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame_grey.png")));
    peptidesHelpJButton.setToolTipText("Help");
    peptidesHelpJButton.setBorder(null);
    peptidesHelpJButton.setBorderPainted(false);
    peptidesHelpJButton.setContentAreaFilled(false);
    // NOI18N
    peptidesHelpJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame.png")));
    peptidesHelpJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            peptidesHelpJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            peptidesHelpJButtonMouseExited(evt);
        }
    });
    peptidesHelpJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            peptidesHelpJButtonActionPerformed(evt);
        }
    });
    peptidesHelpJButton.setBounds(460, 0, 10, 19);
    peptidesLayeredPane.add(peptidesHelpJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    // NOI18N
    exportPeptidesJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportPeptidesJButton.setToolTipText("Copy to File");
    exportPeptidesJButton.setBorder(null);
    exportPeptidesJButton.setBorderPainted(false);
    exportPeptidesJButton.setContentAreaFilled(false);
    // NOI18N
    exportPeptidesJButton.setDisabledIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportPeptidesJButton.setEnabled(false);
    // NOI18N
    exportPeptidesJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame.png")));
    exportPeptidesJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            exportPeptidesJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            exportPeptidesJButtonMouseExited(evt);
        }
    });
    exportPeptidesJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            exportPeptidesJButtonActionPerformed(evt);
        }
    });
    exportPeptidesJButton.setBounds(450, 0, 10, 19);
    peptidesLayeredPane.add(exportPeptidesJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    contextMenuPeptidesBackgroundPanel.setBackground(new java.awt.Color(255, 255, 255));
    javax.swing.GroupLayout contextMenuPeptidesBackgroundPanelLayout = new javax.swing.GroupLayout(contextMenuPeptidesBackgroundPanel);
    contextMenuPeptidesBackgroundPanel.setLayout(contextMenuPeptidesBackgroundPanelLayout);
    contextMenuPeptidesBackgroundPanelLayout.setHorizontalGroup(contextMenuPeptidesBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 30, Short.MAX_VALUE));
    contextMenuPeptidesBackgroundPanelLayout.setVerticalGroup(contextMenuPeptidesBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 19, Short.MAX_VALUE));
    contextMenuPeptidesBackgroundPanel.setBounds(440, 0, 30, 19);
    peptidesLayeredPane.add(contextMenuPeptidesBackgroundPanel, javax.swing.JLayeredPane.POPUP_LAYER);
    javax.swing.GroupLayout peptidesJPanelLayout = new javax.swing.GroupLayout(peptidesJPanel);
    peptidesJPanel.setLayout(peptidesJPanelLayout);
    peptidesJPanelLayout.setHorizontalGroup(peptidesJPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(peptidesLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 485, Short.MAX_VALUE));
    peptidesJPanelLayout.setVerticalGroup(peptidesJPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(peptidesLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 158, Short.MAX_VALUE));
    pdbMatchesJPanel.setOpaque(false);
    pdbMatchesPanel.setBorder(javax.swing.BorderFactory.createTitledBorder("PDB Matches"));
    pdbMatchesPanel.setOpaque(false);
    pdbJScrollPane.setOpaque(false);
    pdbMatchesJTable.setModel(new javax.swing.table.DefaultTableModel(new Object[][] {}, new String[] { " ", "PDB", "Title", "Type", "Chains" }) {

        Class[] types = new Class[] { java.lang.Integer.class, java.lang.String.class, java.lang.String.class, java.lang.String.class, java.lang.Integer.class };

        boolean[] canEdit = new boolean[] { false, false, false, false, false };

        public Class getColumnClass(int columnIndex) {
            return types[columnIndex];
        }

        public boolean isCellEditable(int rowIndex, int columnIndex) {
            return canEdit[columnIndex];
        }
    });
    pdbMatchesJTable.setOpaque(false);
    pdbMatchesJTable.setSelectionMode(javax.swing.ListSelectionModel.SINGLE_SELECTION);
    pdbMatchesJTable.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseExited(java.awt.event.MouseEvent evt) {
            pdbMatchesJTableMouseExited(evt);
        }

        public void mouseReleased(java.awt.event.MouseEvent evt) {
            pdbMatchesJTableMouseReleased(evt);
        }
    });
    pdbMatchesJTable.addMouseMotionListener(new java.awt.event.MouseMotionAdapter() {

        public void mouseMoved(java.awt.event.MouseEvent evt) {
            pdbMatchesJTableMouseMoved(evt);
        }
    });
    pdbMatchesJTable.addKeyListener(new java.awt.event.KeyAdapter() {

        public void keyReleased(java.awt.event.KeyEvent evt) {
            pdbMatchesJTableKeyReleased(evt);
        }
    });
    pdbJScrollPane.setViewportView(pdbMatchesJTable);
    javax.swing.GroupLayout pdbMatchesPanelLayout = new javax.swing.GroupLayout(pdbMatchesPanel);
    pdbMatchesPanel.setLayout(pdbMatchesPanelLayout);
    pdbMatchesPanelLayout.setHorizontalGroup(pdbMatchesPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 468, Short.MAX_VALUE).addGroup(pdbMatchesPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(pdbMatchesPanelLayout.createSequentialGroup().addGap(8, 8, 8).addComponent(pdbJScrollPane).addGap(8, 8, 8))));
    pdbMatchesPanelLayout.setVerticalGroup(pdbMatchesPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 123, Short.MAX_VALUE).addGroup(pdbMatchesPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(pdbMatchesPanelLayout.createSequentialGroup().addContainerGap().addComponent(pdbJScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 101, Short.MAX_VALUE).addContainerGap())));
    pdbMatchesPanel.setBounds(0, 0, 480, 150);
    pdbMatchesLayeredPane.add(pdbMatchesPanel, javax.swing.JLayeredPane.DEFAULT_LAYER);
    // NOI18N
    pdbMatchesHelpJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame_grey.png")));
    pdbMatchesHelpJButton.setToolTipText("Help");
    pdbMatchesHelpJButton.setBorder(null);
    pdbMatchesHelpJButton.setBorderPainted(false);
    pdbMatchesHelpJButton.setContentAreaFilled(false);
    // NOI18N
    pdbMatchesHelpJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame.png")));
    pdbMatchesHelpJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            pdbMatchesHelpJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            pdbMatchesHelpJButtonMouseExited(evt);
        }
    });
    pdbMatchesHelpJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            pdbMatchesHelpJButtonActionPerformed(evt);
        }
    });
    pdbMatchesHelpJButton.setBounds(460, 0, 10, 19);
    pdbMatchesLayeredPane.add(pdbMatchesHelpJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    // NOI18N
    exportPdbMatchesJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportPdbMatchesJButton.setToolTipText("Copy to File");
    exportPdbMatchesJButton.setBorder(null);
    exportPdbMatchesJButton.setBorderPainted(false);
    exportPdbMatchesJButton.setContentAreaFilled(false);
    // NOI18N
    exportPdbMatchesJButton.setDisabledIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportPdbMatchesJButton.setEnabled(false);
    // NOI18N
    exportPdbMatchesJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame.png")));
    exportPdbMatchesJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            exportPdbMatchesJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            exportPdbMatchesJButtonMouseExited(evt);
        }
    });
    exportPdbMatchesJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            exportPdbMatchesJButtonActionPerformed(evt);
        }
    });
    exportPdbMatchesJButton.setBounds(450, 0, 10, 19);
    pdbMatchesLayeredPane.add(exportPdbMatchesJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    contextMenuPdbMatchesBackgroundPanel.setBackground(new java.awt.Color(255, 255, 255));
    javax.swing.GroupLayout contextMenuPdbMatchesBackgroundPanelLayout = new javax.swing.GroupLayout(contextMenuPdbMatchesBackgroundPanel);
    contextMenuPdbMatchesBackgroundPanel.setLayout(contextMenuPdbMatchesBackgroundPanelLayout);
    contextMenuPdbMatchesBackgroundPanelLayout.setHorizontalGroup(contextMenuPdbMatchesBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 30, Short.MAX_VALUE));
    contextMenuPdbMatchesBackgroundPanelLayout.setVerticalGroup(contextMenuPdbMatchesBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 19, Short.MAX_VALUE));
    contextMenuPdbMatchesBackgroundPanel.setBounds(440, 0, 30, 19);
    pdbMatchesLayeredPane.add(contextMenuPdbMatchesBackgroundPanel, javax.swing.JLayeredPane.POPUP_LAYER);
    javax.swing.GroupLayout pdbMatchesJPanelLayout = new javax.swing.GroupLayout(pdbMatchesJPanel);
    pdbMatchesJPanel.setLayout(pdbMatchesJPanelLayout);
    pdbMatchesJPanelLayout.setHorizontalGroup(pdbMatchesJPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(pdbMatchesLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 485, Short.MAX_VALUE));
    pdbMatchesJPanelLayout.setVerticalGroup(pdbMatchesJPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(pdbMatchesLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 158, Short.MAX_VALUE));
    pdbChainsJPanel.setOpaque(false);
    pdbChainsPanel.setBorder(javax.swing.BorderFactory.createTitledBorder("PDB Chains"));
    pdbChainsPanel.setOpaque(false);
    pdbChainsJScrollPane.setOpaque(false);
    pdbChainsJTable.setModel(new javax.swing.table.DefaultTableModel(new Object[][] {}, new String[] { " ", "Chain", "PDB-Protein", "Coverage" }) {

        Class[] types = new Class[] { java.lang.Integer.class, java.lang.String.class, java.lang.Object.class, java.lang.Double.class };

        boolean[] canEdit = new boolean[] { false, false, false, false };

        public Class getColumnClass(int columnIndex) {
            return types[columnIndex];
        }

        public boolean isCellEditable(int rowIndex, int columnIndex) {
            return canEdit[columnIndex];
        }
    });
    pdbChainsJTable.setOpaque(false);
    pdbChainsJTable.setSelectionMode(javax.swing.ListSelectionModel.SINGLE_SELECTION);
    pdbChainsJTable.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseReleased(java.awt.event.MouseEvent evt) {
            pdbChainsJTableMouseReleased(evt);
        }
    });
    pdbChainsJTable.addKeyListener(new java.awt.event.KeyAdapter() {

        public void keyReleased(java.awt.event.KeyEvent evt) {
            pdbChainsJTableKeyReleased(evt);
        }
    });
    pdbChainsJScrollPane.setViewportView(pdbChainsJTable);
    javax.swing.GroupLayout pdbChainsPanelLayout = new javax.swing.GroupLayout(pdbChainsPanel);
    pdbChainsPanel.setLayout(pdbChainsPanelLayout);
    pdbChainsPanelLayout.setHorizontalGroup(pdbChainsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 468, Short.MAX_VALUE).addGroup(pdbChainsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(pdbChainsPanelLayout.createSequentialGroup().addContainerGap().addComponent(pdbChainsJScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 448, Short.MAX_VALUE).addContainerGap())));
    pdbChainsPanelLayout.setVerticalGroup(pdbChainsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 133, Short.MAX_VALUE).addGroup(pdbChainsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(pdbChainsPanelLayout.createSequentialGroup().addContainerGap().addComponent(pdbChainsJScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 111, Short.MAX_VALUE).addContainerGap())));
    pdbChainsPanel.setBounds(0, 0, 480, 160);
    pdbChainsLayeredPane.add(pdbChainsPanel, javax.swing.JLayeredPane.DEFAULT_LAYER);
    // NOI18N
    pdbChainHelpJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame_grey.png")));
    pdbChainHelpJButton.setToolTipText("Help");
    pdbChainHelpJButton.setBorder(null);
    pdbChainHelpJButton.setBorderPainted(false);
    pdbChainHelpJButton.setContentAreaFilled(false);
    // NOI18N
    pdbChainHelpJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame.png")));
    pdbChainHelpJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            pdbChainHelpJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            pdbChainHelpJButtonMouseExited(evt);
        }
    });
    pdbChainHelpJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            pdbChainHelpJButtonActionPerformed(evt);
        }
    });
    pdbChainHelpJButton.setBounds(460, 0, 10, 19);
    pdbChainsLayeredPane.add(pdbChainHelpJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    // NOI18N
    exportPdbChainsJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportPdbChainsJButton.setToolTipText("Copy to File");
    exportPdbChainsJButton.setBorder(null);
    exportPdbChainsJButton.setBorderPainted(false);
    exportPdbChainsJButton.setContentAreaFilled(false);
    // NOI18N
    exportPdbChainsJButton.setDisabledIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportPdbChainsJButton.setEnabled(false);
    // NOI18N
    exportPdbChainsJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame.png")));
    exportPdbChainsJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            exportPdbChainsJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            exportPdbChainsJButtonMouseExited(evt);
        }
    });
    exportPdbChainsJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            exportPdbChainsJButtonActionPerformed(evt);
        }
    });
    exportPdbChainsJButton.setBounds(450, 0, 10, 19);
    pdbChainsLayeredPane.add(exportPdbChainsJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    contextMenuPdbChainsBackgroundPanel.setBackground(new java.awt.Color(255, 255, 255));
    javax.swing.GroupLayout contextMenuPdbChainsBackgroundPanelLayout = new javax.swing.GroupLayout(contextMenuPdbChainsBackgroundPanel);
    contextMenuPdbChainsBackgroundPanel.setLayout(contextMenuPdbChainsBackgroundPanelLayout);
    contextMenuPdbChainsBackgroundPanelLayout.setHorizontalGroup(contextMenuPdbChainsBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 30, Short.MAX_VALUE));
    contextMenuPdbChainsBackgroundPanelLayout.setVerticalGroup(contextMenuPdbChainsBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 19, Short.MAX_VALUE));
    contextMenuPdbChainsBackgroundPanel.setBounds(440, 0, 30, 19);
    pdbChainsLayeredPane.add(contextMenuPdbChainsBackgroundPanel, javax.swing.JLayeredPane.POPUP_LAYER);
    javax.swing.GroupLayout pdbChainsJPanelLayout = new javax.swing.GroupLayout(pdbChainsJPanel);
    pdbChainsJPanel.setLayout(pdbChainsJPanelLayout);
    pdbChainsJPanelLayout.setHorizontalGroup(pdbChainsJPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(pdbChainsLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 485, Short.MAX_VALUE));
    pdbChainsJPanelLayout.setVerticalGroup(pdbChainsJPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(pdbChainsLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 158, Short.MAX_VALUE));
    javax.swing.GroupLayout layout = new javax.swing.GroupLayout(this);
    this.setLayout(layout);
    layout.setHorizontalGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(layout.createSequentialGroup().addContainerGap().addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.TRAILING).addGroup(layout.createSequentialGroup().addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(pdbMatchesJPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE).addComponent(pdbChainsJPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE).addComponent(peptidesJPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)).addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED).addComponent(pdbStructureJPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)).addComponent(proteinsJPanel, javax.swing.GroupLayout.Alignment.LEADING, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)).addContainerGap()));
    layout.setVerticalGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(layout.createSequentialGroup().addContainerGap().addComponent(proteinsJPanel, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE).addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED).addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(layout.createSequentialGroup().addComponent(pdbMatchesJPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE).addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED).addComponent(pdbChainsJPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE).addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED).addComponent(peptidesJPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)).addComponent(pdbStructureJPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)).addContainerGap()));
    pdbStructureJPanel.getAccessibleContext().setAccessibleName("Protein Details");
}

Example 100 with JTableHeader

use of javax.swing.table.JTableHeader in project peptide-shaker by compomics.

the class GOEAPanel method initComponents.

/**
 * This method is called from within the constructor to initialize the form.
 * WARNING: Do NOT modify this code. The content of this method is always
 * regenerated by the Form Editor.
 */
@SuppressWarnings("unchecked")
private // <editor-fold defaultstate="collapsed" desc="Generated Code">//GEN-BEGIN:initComponents
void initComponents() {
    selectTermsJPopupMenu = new javax.swing.JPopupMenu();
    selectAllMenuItem = new javax.swing.JMenuItem();
    deselectAllMenuItem = new javax.swing.JMenuItem();
    selectSignificantMenuItem = new javax.swing.JMenuItem();
    jSeparator1 = new javax.swing.JPopupMenu.Separator();
    statisticsMenuItem = new javax.swing.JMenuItem();
    significanceLevelButtonGroup = new javax.swing.ButtonGroup();
    mappingsTableLayeredPane = new javax.swing.JLayeredPane();
    mappingsPanel = new javax.swing.JPanel();
    proteinGoMappingsScrollPane = new javax.swing.JScrollPane();
    goMappingsTable = new JTable() {

        protected JTableHeader createDefaultTableHeader() {
            return new JTableHeader(columnModel) {

                public String getToolTipText(MouseEvent e) {
                    java.awt.Point p = e.getPoint();
                    int index = columnModel.getColumnIndexAtX(p.x);
                    int realIndex = columnModel.getColumn(index).getModelIndex();
                    String tip = (String) mappingsTableToolTips.get(realIndex);
                    return tip;
                }
            };
        }
    };
    significanceJLabel = new javax.swing.JLabel();
    fivePercentRadioButton = new javax.swing.JRadioButton();
    onePercentRadioButton = new javax.swing.JRadioButton();
    goProteinCountLabel = new javax.swing.JLabel();
    mappingsHelpJButton = new javax.swing.JButton();
    exportMappingsJButton = new javax.swing.JButton();
    contextMenuMappingsBackgroundPanel = new javax.swing.JPanel();
    plotLayeredPane = new javax.swing.JLayeredPane();
    plotPanel = new javax.swing.JPanel();
    goPlotsTabbedPane = new javax.swing.JTabbedPane();
    proteinsPanel = new javax.swing.JPanel();
    proteinsScrollPane = new javax.swing.JScrollPane();
    proteinTable = new JTable() {

        protected JTableHeader createDefaultTableHeader() {
            return new JTableHeader(columnModel) {

                public String getToolTipText(MouseEvent e) {
                    java.awt.Point p = e.getPoint();
                    int index = columnModel.getColumnIndexAtX(p.x);
                    int realIndex = columnModel.getColumn(index).getModelIndex();
                    String tip = (String) proteinTableToolTips.get(realIndex);
                    return tip;
                }
            };
        }
    };
    goFrequencyPlotPanel = new javax.swing.JPanel();
    goSignificancePlotPanel = new javax.swing.JPanel();
    plotHelpJButton = new javax.swing.JButton();
    exportPlotsJButton = new javax.swing.JButton();
    contextMenuPlotsBackgroundPanel = new javax.swing.JPanel();
    selectAllMenuItem.setText("Select All");
    selectAllMenuItem.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            selectAllMenuItemActionPerformed(evt);
        }
    });
    selectTermsJPopupMenu.add(selectAllMenuItem);
    deselectAllMenuItem.setText("Deselect All");
    deselectAllMenuItem.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            deselectAllMenuItemActionPerformed(evt);
        }
    });
    selectTermsJPopupMenu.add(deselectAllMenuItem);
    selectSignificantMenuItem.setText("Select Significant");
    selectSignificantMenuItem.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            selectSignificantMenuItemActionPerformed(evt);
        }
    });
    selectTermsJPopupMenu.add(selectSignificantMenuItem);
    selectTermsJPopupMenu.add(jSeparator1);
    statisticsMenuItem.setText("Statistics (beta)");
    statisticsMenuItem.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            statisticsMenuItemActionPerformed(evt);
        }
    });
    selectTermsJPopupMenu.add(statisticsMenuItem);
    setBackground(new java.awt.Color(255, 255, 255));
    addComponentListener(new java.awt.event.ComponentAdapter() {

        public void componentResized(java.awt.event.ComponentEvent evt) {
            formComponentResized(evt);
        }
    });
    mappingsPanel.setBorder(javax.swing.BorderFactory.createTitledBorder("Gene Ontology Mappings"));
    mappingsPanel.setOpaque(false);
    proteinGoMappingsScrollPane.setOpaque(false);
    goMappingsTable.setModel(new javax.swing.table.DefaultTableModel(new Object[][] {}, new String[] { "", "GO Accession", "GO Term", "GO Domain", "Frequency All (%)", "Frequency Dataset (%)", "Frequency (%)", "Log2 Diff", "p-value", "  " }) {

        Class[] types = new Class[] { java.lang.Integer.class, java.lang.String.class, java.lang.String.class, java.lang.String.class, java.lang.Double.class, java.lang.Double.class, ValueAndBooleanDataPoint.class, java.lang.Object.class, java.lang.Double.class, java.lang.Boolean.class };

        boolean[] canEdit = new boolean[] { false, false, false, false, false, false, false, false, false, true };

        public Class getColumnClass(int columnIndex) {
            return types[columnIndex];
        }

        public boolean isCellEditable(int rowIndex, int columnIndex) {
            return canEdit[columnIndex];
        }
    });
    goMappingsTable.setOpaque(false);
    goMappingsTable.setSelectionMode(javax.swing.ListSelectionModel.SINGLE_SELECTION);
    goMappingsTable.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseReleased(java.awt.event.MouseEvent evt) {
            goMappingsTableMouseReleased(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            goMappingsTableMouseExited(evt);
        }
    });
    goMappingsTable.addMouseMotionListener(new java.awt.event.MouseMotionAdapter() {

        public void mouseMoved(java.awt.event.MouseEvent evt) {
            goMappingsTableMouseMoved(evt);
        }
    });
    goMappingsTable.addKeyListener(new java.awt.event.KeyAdapter() {

        public void keyReleased(java.awt.event.KeyEvent evt) {
            goMappingsTableKeyReleased(evt);
        }
    });
    proteinGoMappingsScrollPane.setViewportView(goMappingsTable);
    significanceJLabel.setText("Significance Level:");
    significanceLevelButtonGroup.add(fivePercentRadioButton);
    fivePercentRadioButton.setSelected(true);
    fivePercentRadioButton.setText("0.05");
    fivePercentRadioButton.setOpaque(false);
    fivePercentRadioButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            fivePercentRadioButtonActionPerformed(evt);
        }
    });
    significanceLevelButtonGroup.add(onePercentRadioButton);
    onePercentRadioButton.setText("0.01");
    onePercentRadioButton.setOpaque(false);
    onePercentRadioButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            onePercentRadioButtonActionPerformed(evt);
        }
    });
    goProteinCountLabel.setText("[GO Proteins: Ensembl: -, Project: -]");
    goProteinCountLabel.setToolTipText("Number of GO mapped proteins");
    javax.swing.GroupLayout mappingsPanelLayout = new javax.swing.GroupLayout(mappingsPanel);
    mappingsPanel.setLayout(mappingsPanelLayout);
    mappingsPanelLayout.setHorizontalGroup(mappingsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(javax.swing.GroupLayout.Alignment.TRAILING, mappingsPanelLayout.createSequentialGroup().addGroup(mappingsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.TRAILING).addGroup(mappingsPanelLayout.createSequentialGroup().addGap(10, 10, 10).addComponent(proteinGoMappingsScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 988, Short.MAX_VALUE)).addGroup(mappingsPanelLayout.createSequentialGroup().addGap(20, 20, 20).addComponent(goProteinCountLabel).addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE).addComponent(significanceJLabel).addGap(18, 18, 18).addComponent(onePercentRadioButton).addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.UNRELATED).addComponent(fivePercentRadioButton).addGap(13, 13, 13))).addContainerGap()));
    mappingsPanelLayout.setVerticalGroup(mappingsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(mappingsPanelLayout.createSequentialGroup().addContainerGap().addComponent(proteinGoMappingsScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 288, Short.MAX_VALUE).addGap(12, 12, 12).addGroup(mappingsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.CENTER).addComponent(significanceJLabel).addComponent(onePercentRadioButton).addComponent(fivePercentRadioButton).addComponent(goProteinCountLabel)).addContainerGap()));
    mappingsTableLayeredPane.add(mappingsPanel);
    mappingsPanel.setBounds(0, 0, 1020, 364);
    // NOI18N
    mappingsHelpJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame_grey.png")));
    mappingsHelpJButton.setToolTipText("Help");
    mappingsHelpJButton.setBorder(null);
    mappingsHelpJButton.setBorderPainted(false);
    mappingsHelpJButton.setContentAreaFilled(false);
    // NOI18N
    mappingsHelpJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame.png")));
    mappingsHelpJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            mappingsHelpJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            mappingsHelpJButtonMouseExited(evt);
        }
    });
    mappingsHelpJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            mappingsHelpJButtonActionPerformed(evt);
        }
    });
    mappingsTableLayeredPane.add(mappingsHelpJButton);
    mappingsHelpJButton.setBounds(990, 0, 10, 19);
    mappingsTableLayeredPane.setLayer(mappingsHelpJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    // NOI18N
    exportMappingsJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportMappingsJButton.setToolTipText("Copy to Clipboard");
    exportMappingsJButton.setBorder(null);
    exportMappingsJButton.setBorderPainted(false);
    exportMappingsJButton.setContentAreaFilled(false);
    // NOI18N
    exportMappingsJButton.setDisabledIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportMappingsJButton.setEnabled(false);
    // NOI18N
    exportMappingsJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame.png")));
    exportMappingsJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            exportMappingsJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            exportMappingsJButtonMouseExited(evt);
        }
    });
    exportMappingsJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            exportMappingsJButtonActionPerformed(evt);
        }
    });
    mappingsTableLayeredPane.add(exportMappingsJButton);
    exportMappingsJButton.setBounds(980, 0, 10, 19);
    mappingsTableLayeredPane.setLayer(exportMappingsJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    contextMenuMappingsBackgroundPanel.setBackground(new java.awt.Color(255, 255, 255));
    javax.swing.GroupLayout contextMenuMappingsBackgroundPanelLayout = new javax.swing.GroupLayout(contextMenuMappingsBackgroundPanel);
    contextMenuMappingsBackgroundPanel.setLayout(contextMenuMappingsBackgroundPanelLayout);
    contextMenuMappingsBackgroundPanelLayout.setHorizontalGroup(contextMenuMappingsBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 30, Short.MAX_VALUE));
    contextMenuMappingsBackgroundPanelLayout.setVerticalGroup(contextMenuMappingsBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 19, Short.MAX_VALUE));
    mappingsTableLayeredPane.add(contextMenuMappingsBackgroundPanel);
    contextMenuMappingsBackgroundPanel.setBounds(980, 0, 30, 19);
    mappingsTableLayeredPane.setLayer(contextMenuMappingsBackgroundPanel, javax.swing.JLayeredPane.POPUP_LAYER);
    plotPanel.setBorder(javax.swing.BorderFactory.createTitledBorder("Gene Ontology Enrichment Analysis"));
    plotPanel.setOpaque(false);
    goPlotsTabbedPane.setTabPlacement(javax.swing.JTabbedPane.BOTTOM);
    goPlotsTabbedPane.addChangeListener(new javax.swing.event.ChangeListener() {

        public void stateChanged(javax.swing.event.ChangeEvent evt) {
            goPlotsTabbedPaneStateChanged(evt);
        }
    });
    proteinsPanel.setOpaque(false);
    proteinsScrollPane.setOpaque(false);
    proteinTable.setModel(new javax.swing.table.DefaultTableModel(new Object[][] {}, new String[] { " ", "Accession", "Description", "Coverage", "#Peptides", "#Spectra", "MS2 Quant.", "Confidence", "  " }) {

        Class[] types = new Class[] { java.lang.Integer.class, java.lang.String.class, java.lang.String.class, java.lang.Object.class, java.lang.Integer.class, java.lang.Integer.class, java.lang.Double.class, java.lang.Double.class, java.lang.Boolean.class };

        boolean[] canEdit = new boolean[] { false, false, false, false, false, false, false, false, false };

        public Class getColumnClass(int columnIndex) {
            return types[columnIndex];
        }

        public boolean isCellEditable(int rowIndex, int columnIndex) {
            return canEdit[columnIndex];
        }
    });
    proteinTable.setSelectionMode(javax.swing.ListSelectionModel.SINGLE_SELECTION);
    proteinTable.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseReleased(java.awt.event.MouseEvent evt) {
            proteinTableMouseReleased(evt);
        }

        public void mouseClicked(java.awt.event.MouseEvent evt) {
            proteinTableMouseClicked(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            proteinTableMouseExited(evt);
        }
    });
    proteinTable.addMouseMotionListener(new java.awt.event.MouseMotionAdapter() {

        public void mouseMoved(java.awt.event.MouseEvent evt) {
            proteinTableMouseMoved(evt);
        }
    });
    proteinTable.addKeyListener(new java.awt.event.KeyAdapter() {

        public void keyReleased(java.awt.event.KeyEvent evt) {
            proteinTableKeyReleased(evt);
        }
    });
    proteinsScrollPane.setViewportView(proteinTable);
    javax.swing.GroupLayout proteinsPanelLayout = new javax.swing.GroupLayout(proteinsPanel);
    proteinsPanel.setLayout(proteinsPanelLayout);
    proteinsPanelLayout.setHorizontalGroup(proteinsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addComponent(proteinsScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 982, Short.MAX_VALUE));
    proteinsPanelLayout.setVerticalGroup(proteinsPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(javax.swing.GroupLayout.Alignment.TRAILING, proteinsPanelLayout.createSequentialGroup().addComponent(proteinsScrollPane, javax.swing.GroupLayout.DEFAULT_SIZE, 276, Short.MAX_VALUE).addContainerGap()));
    goPlotsTabbedPane.addTab("Proteins", proteinsPanel);
    goFrequencyPlotPanel.setBackground(new java.awt.Color(255, 255, 255));
    goFrequencyPlotPanel.setLayout(new javax.swing.BoxLayout(goFrequencyPlotPanel, javax.swing.BoxLayout.LINE_AXIS));
    goPlotsTabbedPane.addTab("Frequency", goFrequencyPlotPanel);
    goSignificancePlotPanel.setBackground(new java.awt.Color(255, 255, 255));
    goSignificancePlotPanel.setLayout(new javax.swing.BoxLayout(goSignificancePlotPanel, javax.swing.BoxLayout.LINE_AXIS));
    goPlotsTabbedPane.addTab("Significance", goSignificancePlotPanel);
    goPlotsTabbedPane.setSelectedIndex(2);
    javax.swing.GroupLayout plotPanelLayout = new javax.swing.GroupLayout(plotPanel);
    plotPanel.setLayout(plotPanelLayout);
    plotPanelLayout.setHorizontalGroup(plotPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(plotPanelLayout.createSequentialGroup().addContainerGap().addComponent(goPlotsTabbedPane).addContainerGap()));
    plotPanelLayout.setVerticalGroup(plotPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(javax.swing.GroupLayout.Alignment.TRAILING, plotPanelLayout.createSequentialGroup().addContainerGap().addComponent(goPlotsTabbedPane, javax.swing.GroupLayout.DEFAULT_SIZE, 319, Short.MAX_VALUE).addContainerGap()));
    plotLayeredPane.add(plotPanel);
    plotPanel.setBounds(0, 0, 1019, 370);
    // NOI18N
    plotHelpJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame_grey.png")));
    plotHelpJButton.setToolTipText("Help");
    plotHelpJButton.setBorder(null);
    plotHelpJButton.setBorderPainted(false);
    plotHelpJButton.setContentAreaFilled(false);
    // NOI18N
    plotHelpJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/help_no_frame.png")));
    plotHelpJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            plotHelpJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            plotHelpJButtonMouseExited(evt);
        }
    });
    plotHelpJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            plotHelpJButtonActionPerformed(evt);
        }
    });
    plotLayeredPane.add(plotHelpJButton);
    plotHelpJButton.setBounds(990, 0, 10, 19);
    plotLayeredPane.setLayer(plotHelpJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    // NOI18N
    exportPlotsJButton.setIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportPlotsJButton.setToolTipText("Export");
    exportPlotsJButton.setBorder(null);
    exportPlotsJButton.setBorderPainted(false);
    exportPlotsJButton.setContentAreaFilled(false);
    // NOI18N
    exportPlotsJButton.setDisabledIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame_grey.png")));
    exportPlotsJButton.setEnabled(false);
    // NOI18N
    exportPlotsJButton.setRolloverIcon(new javax.swing.ImageIcon(getClass().getResource("/icons/export_no_frame.png")));
    exportPlotsJButton.addMouseListener(new java.awt.event.MouseAdapter() {

        public void mouseEntered(java.awt.event.MouseEvent evt) {
            exportPlotsJButtonMouseEntered(evt);
        }

        public void mouseExited(java.awt.event.MouseEvent evt) {
            exportPlotsJButtonMouseExited(evt);
        }
    });
    exportPlotsJButton.addActionListener(new java.awt.event.ActionListener() {

        public void actionPerformed(java.awt.event.ActionEvent evt) {
            exportPlotsJButtonActionPerformed(evt);
        }
    });
    plotLayeredPane.add(exportPlotsJButton);
    exportPlotsJButton.setBounds(980, 0, 10, 19);
    plotLayeredPane.setLayer(exportPlotsJButton, javax.swing.JLayeredPane.POPUP_LAYER);
    contextMenuPlotsBackgroundPanel.setBackground(new java.awt.Color(255, 255, 255));
    javax.swing.GroupLayout contextMenuPlotsBackgroundPanelLayout = new javax.swing.GroupLayout(contextMenuPlotsBackgroundPanel);
    contextMenuPlotsBackgroundPanel.setLayout(contextMenuPlotsBackgroundPanelLayout);
    contextMenuPlotsBackgroundPanelLayout.setHorizontalGroup(contextMenuPlotsBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 30, Short.MAX_VALUE));
    contextMenuPlotsBackgroundPanelLayout.setVerticalGroup(contextMenuPlotsBackgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGap(0, 19, Short.MAX_VALUE));
    plotLayeredPane.add(contextMenuPlotsBackgroundPanel);
    contextMenuPlotsBackgroundPanel.setBounds(980, 0, 30, 19);
    plotLayeredPane.setLayer(contextMenuPlotsBackgroundPanel, javax.swing.JLayeredPane.POPUP_LAYER);
    javax.swing.GroupLayout layout = new javax.swing.GroupLayout(this);
    this.setLayout(layout);
    layout.setHorizontalGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(javax.swing.GroupLayout.Alignment.TRAILING, layout.createSequentialGroup().addContainerGap().addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.TRAILING).addComponent(plotLayeredPane, javax.swing.GroupLayout.Alignment.LEADING, javax.swing.GroupLayout.DEFAULT_SIZE, 1019, Short.MAX_VALUE).addComponent(mappingsTableLayeredPane, javax.swing.GroupLayout.Alignment.LEADING, javax.swing.GroupLayout.DEFAULT_SIZE, 1019, Short.MAX_VALUE)).addContainerGap()));
    layout.setVerticalGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING).addGroup(layout.createSequentialGroup().addContainerGap().addComponent(mappingsTableLayeredPane, javax.swing.GroupLayout.PREFERRED_SIZE, 365, javax.swing.GroupLayout.PREFERRED_SIZE).addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED).addComponent(plotLayeredPane, javax.swing.GroupLayout.DEFAULT_SIZE, 372, Short.MAX_VALUE).addContainerGap()));
}