Examples with Monomer model.Monomer used on opensource projects

Example 16 with Monomer

use of model.Monomer in project Smiles2Monomers by yoann-dufresne.

the class FamilyDB method addObject.

@Override
public void addObject(String id, Family f) {
    Family prev = null;
    for (Monomer m : f.getMonomers()) if (this.database.containsKey(m.getId())) {
        prev = this.database.get(m.getId());
        break;
    }
    if (prev == null) {
        for (Monomer m : f.getMonomers()) {
            super.addObject(m.getId(), f);
            this.uniqFamilies.add(f);
        }
    } else {
        for (Monomer m : f.getMonomers()) {
            prev.addMonomer(m);
            this.database.put(m.getId(), prev);
        }
        for (Residue res : f.getResidues()) prev.addResidue(res);
        for (Link l : f.getDepandances()) prev.addDependance(l);
    }
}