Examples with Task net.sf.mzmine.taskcontrol.Task used on opensource projects

Example 66 with Task

use of net.sf.mzmine.taskcontrol.Task in project mzmine2 by mzmine.

the class FormulaPredictionPeakListModule method runModule.

@Override
@Nonnull
public ExitCode runModule(@Nonnull MZmineProject project, @Nonnull ParameterSet parameters, @Nonnull Collection<Task> tasks) {
    PeakList[] peakLists = parameters.getParameter(FormulaPredictionPeakListParameters.PEAK_LISTS).getValue().getMatchingPeakLists();
    for (PeakList peakList : peakLists) {
        Task newTask = new FormulaPredictionPeakListTask(peakList, parameters);
        tasks.add(newTask);
    }
    return ExitCode.OK;
}

Example 67 with Task

use of net.sf.mzmine.taskcontrol.Task in project mzmine2 by mzmine.

the class IsotopePeakScannerModule method runModule.

@Override
@Nonnull
public ExitCode runModule(@Nonnull MZmineProject project, @Nonnull ParameterSet parameters, @Nonnull Collection<Task> tasks) {
    PeakList[] peakLists = parameters.getParameter(IsotopePeakScannerParameters.PEAK_LISTS).getValue().getMatchingPeakLists();
    for (PeakList peakList : peakLists) {
        Task newTask = new IsotopePeakScannerTask(project, peakList, parameters);
        tasks.add(newTask);
    }
    return ExitCode.OK;
}

Example 68 with Task

use of net.sf.mzmine.taskcontrol.Task in project mzmine2 by mzmine.

the class LinearNormalizerModule method runModule.

@Override
@Nonnull
public ExitCode runModule(@Nonnull MZmineProject project, @Nonnull ParameterSet parameters, @Nonnull Collection<Task> tasks) {
    PeakList[] peakLists = parameters.getParameter(LinearNormalizerParameters.peakLists).getValue().getMatchingPeakLists();
    for (PeakList peakList : peakLists) {
        Task newTask = new LinearNormalizerTask(project, peakList, parameters);
        tasks.add(newTask);
    }
    return ExitCode.OK;
}

Example 69 with Task

use of net.sf.mzmine.taskcontrol.Task in project mzmine2 by mzmine.

the class StandardCompoundNormalizerModule method runModule.

@Override
@Nonnull
public ExitCode runModule(@Nonnull MZmineProject project, @Nonnull ParameterSet parameters, @Nonnull Collection<Task> tasks) {
    PeakList[] peakLists = parameters.getParameter(StandardCompoundNormalizerParameters.peakList).getValue().getMatchingPeakLists();
    for (PeakList peakList : peakLists) {
        Task newTask = new StandardCompoundNormalizerTask(project, peakList, parameters);
        tasks.add(newTask);
    }
    return ExitCode.OK;
}

Example 70 with Task

use of net.sf.mzmine.taskcontrol.Task in project mzmine2 by mzmine.

the class ADAP3DecompositionV1_5Module method runModule.

@Override
@Nonnull
public ExitCode runModule(@Nonnull MZmineProject project, @Nonnull ParameterSet parameters, @Nonnull Collection<Task> tasks) {
    PeakList[] peakLists = parameters.getParameter(ADAP3DecompositionV1_5Parameters.PEAK_LISTS).getValue().getMatchingPeakLists();
    for (PeakList peakList : peakLists) {
        Task newTask = new ADAP3DecompositionV1_5Task(project, peakList, parameters);
        tasks.add(newTask);
    }
    return ExitCode.OK;
}