Examples with Task net.sf.mzmine.taskcontrol.Task used on opensource projects

Example 11 with Task

use of net.sf.mzmine.taskcontrol.Task in project mzmine2 by mzmine.

the class BaselineCorrectionModule method runModule.

@Override
@Nonnull
public ExitCode runModule(@Nonnull MZmineProject project, @Nonnull ParameterSet parameters, @Nonnull Collection<Task> tasks) {
    RawDataFile[] dataFiles = parameters.getParameter(BaselineCorrectionParameters.dataFiles).getValue().getMatchingRawDataFiles();
    for (final RawDataFile dataFile : dataFiles) {
        Task newTask = new BaselineCorrectionTask(project, dataFile, parameters);
        tasks.add(newTask);
    }
    return ExitCode.OK;
}

Example 12 with Task

use of net.sf.mzmine.taskcontrol.Task in project mzmine2 by mzmine.

the class ADAP3DModule method runModule.

@Override
@Nonnull
public ExitCode runModule(@Nonnull MZmineProject project, @Nonnull ParameterSet parameters, @Nonnull Collection<Task> tasks) {
    RawDataFile[] dataFiles = parameters.getParameter(new RawDataFilesParameter()).getValue().getMatchingRawDataFiles();
    for (int i = 0; i < dataFiles.length; i++) {
        Task newTask = new ADAP3DTask(project, dataFiles[i], parameters.cloneParameterSet());
        tasks.add(newTask);
    }
    return ExitCode.OK;
}

Example 13 with Task

use of net.sf.mzmine.taskcontrol.Task in project mzmine2 by mzmine.

the class GridMassModule method runModule.

@Override
@Nonnull
public ExitCode runModule(@Nonnull MZmineProject project, @Nonnull ParameterSet parameters, @Nonnull Collection<Task> tasks) {
    RawDataFile[] dataFiles = parameters.getParameter(new RawDataFilesParameter()).getValue().getMatchingRawDataFiles();
    for (int i = 0; i < dataFiles.length; i++) {
        Task newTask = new GridMassTask(project, dataFiles[i], parameters.cloneParameterSet());
        tasks.add(newTask);
    }
    return ExitCode.OK;
}

Example 14 with Task

use of net.sf.mzmine.taskcontrol.Task in project mzmine2 by mzmine.

the class CropFilterModule method runModule.

@Override
@Nonnull
public ExitCode runModule(@Nonnull MZmineProject project, @Nonnull ParameterSet parameters, @Nonnull Collection<Task> tasks) {
    for (RawDataFile dataFile : parameters.getParameter(CropFilterParameters.dataFiles).getValue().getMatchingRawDataFiles()) {
        Task newTask = new CropFilterTask(project, dataFile, parameters);
        tasks.add(newTask);
    }
    return ExitCode.OK;
}

Example 15 with Task

use of net.sf.mzmine.taskcontrol.Task in project mzmine2 by mzmine.

the class ShoulderPeaksFilterModule method runModule.

@Override
@Nonnull
public ExitCode runModule(@Nonnull MZmineProject project, @Nonnull ParameterSet parameters, @Nonnull Collection<Task> tasks) {
    RawDataFile[] dataFiles = parameters.getParameter(ShoulderPeaksFilterParameters.dataFiles).getValue().getMatchingRawDataFiles();
    for (RawDataFile dataFile : dataFiles) {
        Task newTask = new ShoulderPeaksFilterTask(dataFile, parameters.cloneParameterSet());
        tasks.add(newTask);
    }
    return ExitCode.OK;
}