Examples with Entity nl.knaw.huygens.timbuctoo.v5.serializable.dto.Entity used on opensource projects

Example 6 with Entity

use of nl.knaw.huygens.timbuctoo.v5.serializable.dto.Entity in project timbuctoo by HuygensING.

the class AzureVreAuthorizationAccess method deleteVreAuthorizations.

@Override
public void deleteVreAuthorizations(String vreId) throws AuthorizationUnavailableException {
    String condition = TableQuery.generateFilterCondition("PartitionKey", TableQuery.QueryComparisons.EQUAL, vreId);
    TableBatchOperation deletes = new TableBatchOperation();
    for (DynamicTableEntity entity : table.execute(TableQuery.from(DynamicTableEntity.class).where(condition))) {
        deletes.delete(entity);
    }
    try {
        table.execute(deletes);
    } catch (StorageException e) {
        LOG.error("deleteVreAuthorizations failed", e);
        throw new AuthorizationUnavailableException("Could not delete authorizations");
    }
}

Example 7 with Entity

use of nl.knaw.huygens.timbuctoo.v5.serializable.dto.Entity in project timbuctoo by HuygensING.

the class JsonProvenanceToRdfPatch method collectReplacements.

public static Map<String, List<CursorQuad>> collectReplacements(JsonNode activity, QuadStore quadStore) {
    Map<String, List<CursorQuad>> toReplace = new HashMap<>();
    for (JsonNode revision : activity.get(PROV_GENERATES)) {
        final JsonNode replacements = revision.get(TIM_REPLACEMENTS);
        if (replacements != null) {
            String entity = revision.get(PROV_SPECIALIZATION_OF).get(0).get("@id").asText();
            List<CursorQuad> quads = new ArrayList<>();
            toReplace.put(revision.get("@id").asText(), quads);
            for (JsonNode replacement : replacements) {
                if (replacement.has(TIM_PREDICATE)) {
                    final String predicate = replacement.get(TIM_PREDICATE).get(0).get("@value").asText();
                    try (Stream<CursorQuad> source = quadStore.getQuads(entity, predicate, Direction.OUT, "")) {
                        source.forEach(quads::add);
                    }
                }
            }
        }
    }
    return toReplace;
}

Example 8 with Entity

use of nl.knaw.huygens.timbuctoo.v5.serializable.dto.Entity in project timbuctoo by HuygensING.

the class ViewConfigFetcher method makeDefaultViewConfig.

private ArrayList<Map> makeDefaultViewConfig(String collectionUri, Map<String, Type> schema, TypeNameStore typeNameStore) {
    ArrayList<Map> result = new ArrayList<>();
    Type collectionType = schema.get(collectionUri);
    if (collectionType == null) {
        LOG.error("The collectionUri " + collectionUri + " does not exist in the schema! (it does contain: [ " + schema.keySet().stream().collect(Collectors.joining(", ")) + " ]");
    } else {
        result.add(title(path(jsnA(jsnA(jsn("Entity"), jsn("title")), jsnA(jsn("Value"), jsn("value"))))));
        final String collectionGraphqlTypeWithoutDataSet = typeNameStore.makeGraphQlname(collectionUri);
        for (Predicate predicate : collectionType.getPredicates()) {
            final String predicateAsGraphqlProp = typeNameStore.makeGraphQlnameForPredicate(predicate.getName(), predicate.getDirection(), predicate.isList());
            ArrayNode predicateReference = jsnA(jsnA(jsn(collectionGraphqlTypeWithoutDataSet), jsn(predicateAsGraphqlProp)));
            if (predicate.isList()) {
                predicateReference.add(jsnA(jsn("items"), jsn("items")));
            }
            String title = "";
            if (predicate.getDirection() == Direction.IN) {
                title = "⬅︎ ";
            }
            title += typeNameStore.shorten(predicate.getName());
            if (predicate.getReferenceTypes().values().stream().anyMatch(x -> x > 0)) {
                // it's at least sometimes a link
                result.add(keyValue(title, internalLink(path(pushImm(predicateReference, jsnA(jsn("Entity"), jsn("uri")))), path(pushImm(predicateReference, jsnA(jsn("Entity"), jsn("title")), jsnA(jsn("Value"), jsn("value")))))));
            }
            if (predicate.getValueTypes().values().stream().anyMatch(x -> x > 0)) {
                // it's at least sometimes a normal value
                result.add(keyValue(title, path(pushImm(predicateReference, jsnA(jsn("Value"), jsn("value"))))));
            }
        }
    }
    return result;
}

Example 9 with Entity

use of nl.knaw.huygens.timbuctoo.v5.serializable.dto.Entity in project timbuctoo by HuygensING.

the class ViewConfigMutation method get.

@Override
public Object get(DataFetchingEnvironment env) {
    String collectionUri = env.getArgument("collectionUri");
    Object viewConfig = env.getArgument("viewConfig");
    DataSet dataSet = MutationHelpers.getDataSet(env, dataSetRepository::getDataSet);
    MutationHelpers.checkAdminPermissions(env, dataSet.getMetadata());
    try {
        MutationHelpers.addMutation(dataSet, new PredicateMutation().entity(collectionUri, replace(HAS_VIEW_CONFIG, value(OBJECT_MAPPER.writeValueAsString(viewConfig)))));
        return viewConfig;
    } catch (LogStorageFailedException | InterruptedException | ExecutionException | JsonProcessingException e) {
        throw new RuntimeException(e);
    }
}

Example 10 with Entity

use of nl.knaw.huygens.timbuctoo.v5.serializable.dto.Entity in project timbuctoo by HuygensING.

the class EntityToJsonMapper method mapEntity.

public ObjectNode mapEntity(Collection collection, ReadEntity entity, boolean withRelations, ExtraEntityMappingOptions extraEntityMappingOptions, ExtraRelationMappingOptions relationMappingOptions) {
    final ObjectNode mappedEntity = JsonNodeFactory.instance.objectNode();
    String id = entity.getId().toString();
    mappedEntity.set("@type", jsn(collection.getEntityTypeName()));
    mappedEntity.set("_id", jsn(id));
    mappedEntity.set("^rev", jsn(entity.getRev()));
    mappedEntity.set("^deleted", jsn(entity.getDeleted()));
    mappedEntity.set("^pid", jsn(entity.getPid()));
    if (entity.getRdfUri() != null) {
        mappedEntity.set("^rdfUri", jsn(entity.getRdfUri().toString()));
    }
    mappedEntity.set("^rdfAlternatives", jsnA(entity.getRdfAlternatives().stream().map(JsonBuilder::jsn)));
    JsonNode variationRefs = jsnA(entity.getTypes().stream().map(type -> {
        ObjectNode variationRef = jsnO();
        variationRef.set("id", jsn(id));
        variationRef.set("type", jsn(type));
        return variationRef;
    }));
    mappedEntity.set("@variationRefs", variationRefs);
    Change modified = entity.getModified();
    mappedEntity.set("^modified", mapChange(modified));
    Change created = entity.getCreated();
    mappedEntity.set("^created", mapChange(created));
    // translate TimProperties to Json
    JsonPropertyConverter jsonPropertyConverter = new JsonPropertyConverter(collection);
    entity.getProperties().forEach(prop -> {
        try {
            Tuple<String, JsonNode> convertedProperty = prop.convert(jsonPropertyConverter);
            mappedEntity.set(convertedProperty.getLeft(), convertedProperty.getRight());
        } catch (IOException e) {
            LOG.error(databaseInvariant, propConversionErrorMessage(id, prop));
            LOG.error("Exception message: {}", e.getMessage());
            LOG.debug("Stack trace", e);
        }
    });
    if (!Strings.isNullOrEmpty(entity.getDisplayName())) {
        mappedEntity.set("@displayName", jsn(entity.getDisplayName()));
    }
    extraEntityMappingOptions.execute(entity, mappedEntity);
    if (withRelations) {
        mappedEntity.set("@relationCount", jsn(entity.getRelations().size()));
        mappedEntity.set("@relations", mapRelations(entity.getRelations(), relationMappingOptions));
    }
    return mappedEntity;
}