Examples with DisplayEventDefinitionCRFBean org.akaza.openclinica.bean.managestudy.DisplayEventDefinitionCRFBean used on opensource projects

Example 6 with DisplayEventDefinitionCRFBean

use of org.akaza.openclinica.bean.managestudy.DisplayEventDefinitionCRFBean in project OpenClinica by OpenClinica.

the class EnterDataForStudyEventServlet method getUncompletedCRFs.

/**
     * Finds all the event definitions for which no event CRF exists - which is
     * the list of event definitions with uncompleted event CRFs.
     *
     * @param eventDefinitionCRFs
     *            All of the event definition CRFs for this study event.
     * @param eventCRFs
     *            All of the event CRFs for this study event.
     * @return The list of event definitions for which no event CRF exists.
     */
private ArrayList getUncompletedCRFs(ArrayList eventDefinitionCRFs, ArrayList eventCRFs) {
    int i;
    HashMap completed = new HashMap();
    HashMap startedButIncompleted = new HashMap();
    ArrayList answer = new ArrayList();
    for (i = 0; i < eventDefinitionCRFs.size(); i++) {
        EventDefinitionCRFBean edcrf = (EventDefinitionCRFBean) eventDefinitionCRFs.get(i);
        completed.put(new Integer(edcrf.getCrfId()), Boolean.FALSE);
        startedButIncompleted.put(new Integer(edcrf.getCrfId()), new EventCRFBean());
    }
    FormLayoutDAO fldao = new FormLayoutDAO(sm.getDataSource());
    ItemDataDAO iddao = new ItemDataDAO(sm.getDataSource());
    for (i = 0; i < eventCRFs.size(); i++) {
        EventCRFBean ecrf = (EventCRFBean) eventCRFs.get(i);
        int crfId = fldao.getCRFIdFromFormLayoutId(ecrf.getFormLayoutId());
        ArrayList idata = iddao.findAllByEventCRFId(ecrf.getId());
        if (!idata.isEmpty()) {
            // this crf has data already
            completed.put(new Integer(crfId), Boolean.TRUE);
        } else {
            // event crf got created, but no data entered
            startedButIncompleted.put(new Integer(crfId), ecrf);
        }
    }
    for (i = 0; i < eventDefinitionCRFs.size(); i++) {
        DisplayEventDefinitionCRFBean dedc = new DisplayEventDefinitionCRFBean();
        EventDefinitionCRFBean edcrf = (EventDefinitionCRFBean) eventDefinitionCRFs.get(i);
        dedc.setEdc(edcrf);
        Boolean b = (Boolean) completed.get(new Integer(edcrf.getCrfId()));
        EventCRFBean ev = (EventCRFBean) startedButIncompleted.get(new Integer(edcrf.getCrfId()));
        if (b == null || !b.booleanValue()) {
            dedc.setEventCRF(ev);
            answer.add(dedc);
        }
    }
    return answer;
}

Example 7 with DisplayEventDefinitionCRFBean

use of org.akaza.openclinica.bean.managestudy.DisplayEventDefinitionCRFBean in project OpenClinica by OpenClinica.

the class StudyInfoPanel method generateTreeFromBeansWithoutLink.

/**
     * Generates a tree view in sdie info panel for submitting data page
     *
     * @param rows
     * @param displayData
     * @param studySubject
     * @param ecb
     * @return
     */
public ArrayList generateTreeFromBeansWithoutLink(ArrayList rows, ArrayList displayData, StudySubjectBean studySubject, EventCRFBean ecb) {
    Iterator itRows = rows.iterator();
    displayData.add(new StudyInfoPanelLine("Study Events", "(" + rows.size() + ")", true, false, false));
    while (itRows.hasNext()) {
        DisplayStudyEventBean dseBean = (DisplayStudyEventBean) itRows.next();
        StudyEventBean seBean = dseBean.getStudyEvent();
        // checks whether the event is the current one
        if (ecb != null && ecb.getStudyEventId() == seBean.getId()) {
            displayData.add(new StudyInfoPanelLine("Study Event", seBean.getStudyEventDefinition().getName(), true, false, true));
        } else {
            displayData.add(new StudyInfoPanelLine("Study Event", seBean.getStudyEventDefinition().getName(), true, false, false));
        }
        displayData.add(new StudyInfoPanelLine("<b>Status: </b>", seBean.getSubjectEventStatus().getName(), false, false, false));
        ArrayList displayCRFs = dseBean.getDisplayEventCRFs();
        int count = 0;
        Iterator displayIt = displayCRFs.iterator();
        while (displayIt.hasNext()) {
            DisplayEventCRFBean dec = (DisplayEventCRFBean) displayIt.next();
            if (count == displayCRFs.size() - 1 && dseBean.getUncompletedCRFs().size() == 0) {
                // it's the current crf
                if (ecb != null && ecb.getId() == dec.getEventCRF().getId()) {
                    displayData.add(new StudyInfoPanelLine("" + getStageImageText(dec.getStage()), "<span class='alert'>" + dec.getEventCRF().getCrf().getName() + " " + dec.getEventCRF().getCrfVersion().getName() + "</span>", false, true, true));
                } else {
                    displayData.add(new StudyInfoPanelLine("" + getStageImageText(dec.getStage()), dec.getEventCRF().getCrf().getName() + " " + dec.getEventCRF().getCrfVersion().getName(), false, true, false));
                }
            } else {
                if (ecb != null && ecb.getId() == dec.getEventCRF().getId()) {
                    displayData.add(new StudyInfoPanelLine("" + getStageImageText(dec.getStage()), "<span class='alert'>" + dec.getEventCRF().getCrf().getName() + " " + dec.getEventCRF().getCrfVersion().getName() + "</span>", false, false, true));
                } else {
                    displayData.add(new StudyInfoPanelLine("" + getStageImageText(dec.getStage()), dec.getEventCRF().getCrf().getName() + " " + dec.getEventCRF().getCrfVersion().getName(), false, false, false));
                }
            }
            count++;
        }
        count = 0;
        ArrayList uncompleted = dseBean.getUncompletedCRFs();
        Iterator uncompIt = uncompleted.iterator();
        while (uncompIt.hasNext()) {
            DisplayEventDefinitionCRFBean dedc = (DisplayEventDefinitionCRFBean) uncompIt.next();
            if (count == uncompleted.size() - 1) {
                if (ecb != null && ecb.getId() == dedc.getEventCRF().getId() && ecb.getCrf().getId() == dedc.getEventCRF().getCrf().getId()) {
                    // logger.info("ecb id*******" + ecb.getId() +
                    // dedc.getEventCRF().getId());
                    displayData.add(new StudyInfoPanelLine("<img src='images/icon_NotStarted.gif' alt='Not Started'/>", "<span class='alert'>" + dedc.getEdc().getCrf().getName() + "</span>", false, true, true));
                } else {
                    displayData.add(new StudyInfoPanelLine("<img src='images/icon_NotStarted.gif' alt='Not Started'/>", dedc.getEdc().getCrf().getName(), false, true, false));
                }
            } else {
                if (ecb != null && ecb.getId() == dedc.getEventCRF().getId()) {
                    // logger.info("ecb id*******" + ecb.getId() +
                    // dedc.getEventCRF().getId());
                    displayData.add(new StudyInfoPanelLine("<img src='images/icon_NotStarted.gif' alt='Not Started'/>", "<span class='alert'>" + dedc.getEdc().getCrf().getName() + "</span>", false, false, true));
                } else {
                    displayData.add(new StudyInfoPanelLine("<img src='images/icon_NotStarted.gif' alt='Not Started'/>", dedc.getEdc().getCrf().getName(), false, false, false));
                }
            }
            count++;
        }
    }
    return displayData;
}

Example 8 with DisplayEventDefinitionCRFBean

use of org.akaza.openclinica.bean.managestudy.DisplayEventDefinitionCRFBean in project OpenClinica by OpenClinica.

the class StudySubjectServiceImpl method getDisplayStudyEventsForStudySubject.

@Override
@SuppressWarnings({ "unchecked", "rawtypes" })
public List<DisplayStudyEventBean> getDisplayStudyEventsForStudySubject(StudySubjectBean studySubject, UserAccountBean userAccount, StudyUserRoleBean currentRole) {
    StudyEventDAO studyEventDao = new StudyEventDAO(dataSource);
    StudyEventDefinitionDAO studyEventDefinitionDao = new StudyEventDefinitionDAO(dataSource);
    StudyDAO studyDao = new StudyDAO(dataSource);
    EventDefinitionCRFDAO eventDefinitionCrfDao = new EventDefinitionCRFDAO(dataSource);
    EventCRFDAO eventCrfDao = new EventCRFDAO(dataSource);
    CRFDAO crfDao = new CRFDAO(dataSource);
    FormLayoutDAO formLayoutDAO = new FormLayoutDAO(dataSource);
    ArrayList events = studyEventDao.findAllByStudySubject(studySubject);
    Map<Integer, StudyEventDefinitionBean> eventDefinitionByEvent = studyEventDefinitionDao.findByStudySubject(studySubject.getId());
    StudyBean study = (StudyBean) studyDao.findByPK(studySubject.getStudyId());
    Map<Integer, SortedSet<EventDefinitionCRFBean>> eventDefinitionCrfByStudyEventDefinition;
    if (study.getParentStudyId() < 1) {
        // Is a study
        eventDefinitionCrfByStudyEventDefinition = eventDefinitionCrfDao.buildEventDefinitionCRFListByStudyEventDefinitionForStudy(studySubject.getId());
    } else {
        // Is a site
        eventDefinitionCrfByStudyEventDefinition = eventDefinitionCrfDao.buildEventDefinitionCRFListByStudyEventDefinition(studySubject.getId(), study.getId(), study.getParentStudyId());
    }
    Map<Integer, SortedSet<EventCRFBean>> eventCrfListByStudyEvent = eventCrfDao.buildEventCrfListByStudyEvent(studySubject.getId());
    Map<Integer, Integer> maxOrdinalByStudyEvent = studyEventDefinitionDao.buildMaxOrdinalByStudyEvent(studySubject.getId());
    Set<Integer> nonEmptyEventCrf = eventCrfDao.buildNonEmptyEventCrfIds(studySubject.getId());
    Map<Integer, FormLayoutBean> formLayoutById = formLayoutDAO.buildFormLayoutById(studySubject.getId());
    Map<Integer, CRFBean> crfById = crfDao.buildCrfById(studySubject.getId());
    ArrayList<DisplayStudyEventBean> displayEvents = new ArrayList<DisplayStudyEventBean>();
    for (int i = 0; i < events.size(); i++) {
        StudyEventBean event = (StudyEventBean) events.get(i);
        StudyEventDefinitionBean sed = eventDefinitionByEvent.get(event.getStudyEventDefinitionId());
        event.setStudyEventDefinition(sed);
        List eventDefinitionCRFs = new ArrayList((eventDefinitionCrfByStudyEventDefinition.containsKey(sed.getId()) ? eventDefinitionCrfByStudyEventDefinition.get(sed.getId()) : Collections.EMPTY_LIST));
        List eventCRFs = new ArrayList((eventCrfListByStudyEvent.containsKey(event.getId())) ? eventCrfListByStudyEvent.get(event.getId()) : Collections.EMPTY_LIST);
        // construct info needed on view study event page
        DisplayStudyEventBean de = new DisplayStudyEventBean();
        de.setStudyEvent(event);
        de.setDisplayEventCRFs((ArrayList<DisplayEventCRFBean>) getDisplayEventCRFs(eventCRFs, userAccount, currentRole, event.getSubjectEventStatus(), study, nonEmptyEventCrf, formLayoutById, crfById, event.getStudyEventDefinitionId(), eventDefinitionCRFs));
        ArrayList<DisplayEventDefinitionCRFBean> al = getUncompletedCRFs(eventDefinitionCRFs, eventCRFs, event.getSubjectEventStatus(), nonEmptyEventCrf, formLayoutById, crfById);
        populateUncompletedCRFsWithCRFAndVersions(al, formLayoutById, crfById);
        de.setUncompletedCRFs(al);
        // de.setMaximumSampleOrdinal(studyEventDao.getMaxSampleOrdinal(sed,
        // studySubject));
        de.setMaximumSampleOrdinal(maxOrdinalByStudyEvent.get(event.getStudyEventDefinitionId()));
        displayEvents.add(de);
    // event.setEventCRFs(createAllEventCRFs(eventCRFs,
    // eventDefinitionCRFs));
    }
    return displayEvents;
}

Example 9 with DisplayEventDefinitionCRFBean

use of org.akaza.openclinica.bean.managestudy.DisplayEventDefinitionCRFBean in project OpenClinica by OpenClinica.

the class HideCRFManager method removeHiddenEventCRF.

public void removeHiddenEventCRF(DisplayStudyEventBean displayStudyEventBean) {
    List<DisplayEventCRFBean> eventCRFBeans = displayStudyEventBean.getAllEventCRFs();
    displayStudyEventBean.setAllEventCRFs(suppressHiddenEventCRFBeans(eventCRFBeans));
    eventCRFBeans = displayStudyEventBean.getDisplayEventCRFs();
    displayStudyEventBean.setDisplayEventCRFs(suppressHiddenEventCRFBeans(eventCRFBeans));
    List<DisplayEventDefinitionCRFBean> displayEventDefinitionCRFBeans = displayStudyEventBean.getUncompletedCRFs();
    ArrayList<DisplayEventDefinitionCRFBean> newDisplayEventDefinitionCRFBeans = new ArrayList<DisplayEventDefinitionCRFBean>();
    for (DisplayEventDefinitionCRFBean displayEventDefinitionCRFBean : displayEventDefinitionCRFBeans) {
        if (!displayEventDefinitionCRFBean.getEdc().isHideCrf()) {
            newDisplayEventDefinitionCRFBeans.add(displayEventDefinitionCRFBean);
        }
    }
    displayStudyEventBean.setUncompletedCRFs(newDisplayEventDefinitionCRFBeans);
}

Example 10 with DisplayEventDefinitionCRFBean

use of org.akaza.openclinica.bean.managestudy.DisplayEventDefinitionCRFBean in project OpenClinica by OpenClinica.

the class ViewStudySubjectServlet method populateUncompletedCRFsWithCRFAndVersions.

public static void populateUncompletedCRFsWithCRFAndVersions(DataSource ds, ArrayList uncompletedEventDefinitionCRFs) {
    CRFDAO cdao = new CRFDAO(ds);
    CRFVersionDAO cvdao = new CRFVersionDAO(ds);
    int size = uncompletedEventDefinitionCRFs.size();
    for (int i = 0; i < size; i++) {
        DisplayEventDefinitionCRFBean dedcrf = (DisplayEventDefinitionCRFBean) uncompletedEventDefinitionCRFs.get(i);
        CRFBean cb = (CRFBean) cdao.findByPK(dedcrf.getEdc().getCrfId());
        dedcrf.getEdc().setCrf(cb);
        ArrayList theVersions = (ArrayList) cvdao.findAllActiveByCRF(dedcrf.getEdc().getCrfId());
        ArrayList versions = new ArrayList();
        HashMap<String, CRFVersionBean> crfVersionIds = new HashMap<String, CRFVersionBean>();
        for (int j = 0; j < theVersions.size(); j++) {
            CRFVersionBean crfVersion = (CRFVersionBean) theVersions.get(j);
            crfVersionIds.put(String.valueOf(crfVersion.getId()), crfVersion);
        }
        if (!dedcrf.getEdc().getSelectedVersionIds().equals("")) {
            String[] kk = dedcrf.getEdc().getSelectedVersionIds().split(",");
            for (String string : kk) {
                if (crfVersionIds.get(string) != null) {
                    versions.add(crfVersionIds.get(string));
                }
            }
        } else {
            versions = theVersions;
        }
        dedcrf.getEdc().setVersions(versions);
        uncompletedEventDefinitionCRFs.set(i, dedcrf);
    }
}