use of org.apache.airavata.model.error.InvalidRequestException in project airavata by apache.
the class CreateLaunchExperimentUS3 method createExperimentForTrestles.
// public static void addDescriptors() throws AiravataAPIInvocationException,ApplicationSettingsException {
// try {
// UltrascanDocumentCreator documentCreator = new UltrascanDocumentCreator(getAiravataAPI());
// documentCreator.createMPIPBSDocsTrestles();
// documentCreator.createEchoPBSDocsforTestles();
// documentCreator.createEchoSlurmDocsofStampede();
// documentCreator.createMPISLURMDocsStampede();
// } catch (AiravataAPIInvocationException e) {
// logger.error("Unable to create airavata API", e.getMessage());
// throw new AiravataAPIInvocationException(e);
// } catch (ApplicationSettingsException e) {
// logger.error("Unable to create airavata API", e.getMessage());
// throw new ApplicationSettingsException(e.getMessage());
// }
// }
// private static AiravataAPI getAiravataAPI() throws AiravataAPIInvocationException, ApplicationSettingsException {
// AiravataAPI airavataAPI;
// try {
// String sysUser = ClientSettings.getSetting(DEFAULT_USER);
// String gateway = ClientSettings.getSetting(DEFAULT_GATEWAY);
// airavataAPI = AiravataAPIFactory.getAPI(gateway, sysUser);
// } catch (AiravataAPIInvocationException e) {
// logger.error("Unable to create airavata API", e.getMessage());
// throw new AiravataAPIInvocationException(e);
// } catch (ApplicationSettingsException e) {
// logger.error("Unable to create airavata API", e.getMessage());
// throw new ApplicationSettingsException(e.getMessage());
// }
// return airavataAPI;
// }
public static String createExperimentForTrestles(Airavata.Client client) throws TException {
try {
List<InputDataObjectType> exInputs = new ArrayList<InputDataObjectType>();
InputDataObjectType input = new InputDataObjectType();
input.setName("echo_input");
input.setType(DataType.STRING);
input.setValue("echo_output=Hello World");
exInputs.add(input);
List<OutputDataObjectType> exOut = new ArrayList<OutputDataObjectType>();
OutputDataObjectType output = new OutputDataObjectType();
output.setName("echo_output");
output.setType(DataType.STRING);
output.setValue("");
exOut.add(output);
Project project = ProjectModelUtil.createProject("project1", "admin", "test project");
String projectId = client.createProject(new AuthzToken(""), DEFAULT_GATEWAY, project);
ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, projectId, "admin", "US3EchoExperimentTrestles", "US3EchoTrestles", "US3EchoTrestles", exInputs);
simpleExperiment.setExperimentOutputs(exOut);
ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling("trestles.sdsc.edu", 1, 1, 1, "shared", 0, 0);
scheduling.setResourceHostId("gsissh-trestles");
UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
userConfigurationData.setAiravataAutoSchedule(false);
userConfigurationData.setOverrideManualScheduledParams(false);
userConfigurationData.setComputationalResourceScheduling(scheduling);
simpleExperiment.setUserConfigurationData(userConfigurationData);
return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
} catch (AiravataSystemException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new AiravataSystemException(e);
} catch (InvalidRequestException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new InvalidRequestException(e);
} catch (AiravataClientException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new AiravataClientException(e);
} catch (TException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new TException(e);
}
}
use of org.apache.airavata.model.error.InvalidRequestException in project airavata by apache.
the class CreateLaunchExperimentUS3 method createUS3ExperimentForLonestar.
public static String createUS3ExperimentForLonestar(Airavata.Client client) throws AiravataSystemException, InvalidRequestException, AiravataClientException, TException {
try {
List<InputDataObjectType> exInputs = new ArrayList<InputDataObjectType>();
InputDataObjectType input = new InputDataObjectType();
input.setName("input");
input.setType(DataType.URI);
input.setValue("file:///home/airavata/input/hpcinput.tar");
InputDataObjectType input1 = new InputDataObjectType();
input1.setName("walltime");
input1.setType(DataType.STRING);
input1.setValue("-walltime=60");
InputDataObjectType input2 = new InputDataObjectType();
input2.setName("mgroupcount");
input2.setType(DataType.STRING);
input2.setValue("-mgroupcount=1");
exInputs.add(input);
exInputs.add(input1);
exInputs.add(input2);
List<OutputDataObjectType> exOut = new ArrayList<OutputDataObjectType>();
OutputDataObjectType output = new OutputDataObjectType();
output.setName("output");
output.setType(DataType.URI);
output.setValue("");
// OutputDataObjectType output1 = new OutputDataObjectType();
// output1.setName("stdout");
// output1.setType(DataType.STDOUT);
// output1.setValue("");
// OutputDataObjectType output2 = new OutputDataObjectType();
// output2.setName("stderr");
// output2.setType(DataType.STDERR);
// output2.setValue("");
exOut.add(output);
// exOut.add(output1);
// exOut.add(output2);
// Project project = ProjectModelUtil.createProject("project1", "admin", "test project");
// String projectId = client.createProject(project);
ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "ultrascan_41574ef5-b054-4d03-ab20-2cfe768d5096", "ultrascan", "US3ExperimentLonestar", "US3AppLonestar", "ultrascan_e76ab5cf-79f6-44df-a244-10a734183fec", exInputs);
simpleExperiment.setExperimentOutputs(exOut);
ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling("lonestar.tacc.teragrid.org_2e0273bc-324b-419b-9786-38a360d44772", 12, 2, 0, "normal", 30, 0);
scheduling.setResourceHostId("lonestar.tacc.teragrid.org_2e0273bc-324b-419b-9786-38a360d44772");
UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
userConfigurationData.setAiravataAutoSchedule(false);
userConfigurationData.setOverrideManualScheduledParams(false);
userConfigurationData.setComputationalResourceScheduling(scheduling);
/* AdvancedOutputDataHandling dataHandling = new AdvancedOutputDataHandling();
dataHandling.setOutputDataDir("/home/airavata/output/");
userConfigurationData.setAdvanceOutputDataHandling(dataHandling);*/
simpleExperiment.setUserConfigurationData(userConfigurationData);
return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
} catch (AiravataSystemException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new AiravataSystemException(e);
} catch (InvalidRequestException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new InvalidRequestException(e);
} catch (AiravataClientException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new AiravataClientException(e);
} catch (TException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new TException(e);
}
}
use of org.apache.airavata.model.error.InvalidRequestException in project airavata by apache.
the class CreateLaunchExperimentUS3 method createExperimentForStampede.
public static String createExperimentForStampede(Airavata.Client client) throws TException {
try {
List<InputDataObjectType> exInputs = new ArrayList<InputDataObjectType>();
InputDataObjectType input = new InputDataObjectType();
input.setName("echo_input");
input.setType(DataType.STRING);
input.setValue("echo_output=Hello World");
exInputs.add(input);
List<OutputDataObjectType> exOut = new ArrayList<OutputDataObjectType>();
OutputDataObjectType output = new OutputDataObjectType();
output.setName("echo_output");
output.setType(DataType.STRING);
output.setValue("");
exOut.add(output);
Project project = ProjectModelUtil.createProject("project1", "admin", "test project");
String projectId = client.createProject(new AuthzToken(""), DEFAULT_GATEWAY, project);
ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, projectId, "admin", "US3EchoExperimentStatus", "US3EchoStampede", "US3EchoStampede", exInputs);
simpleExperiment.setExperimentOutputs(exOut);
ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling("stampede.tacc.xsede.org", 1, 1, 1, "development", 0, 0);
scheduling.setResourceHostId("gsissh-stampede");
UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
userConfigurationData.setAiravataAutoSchedule(false);
userConfigurationData.setOverrideManualScheduledParams(false);
userConfigurationData.setComputationalResourceScheduling(scheduling);
simpleExperiment.setUserConfigurationData(userConfigurationData);
return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
} catch (AiravataSystemException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new AiravataSystemException(e);
} catch (InvalidRequestException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new InvalidRequestException(e);
} catch (AiravataClientException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new AiravataClientException(e);
} catch (TException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new TException(e);
}
}
use of org.apache.airavata.model.error.InvalidRequestException in project airavata by apache.
the class CreateLaunchExperimentUS3 method createUS3ExperimentForAlamo.
public static String createUS3ExperimentForAlamo(Airavata.Client client) throws AiravataSystemException, InvalidRequestException, AiravataClientException, TException {
try {
List<InputDataObjectType> exInputs = new ArrayList<InputDataObjectType>();
InputDataObjectType input = new InputDataObjectType();
input.setName("input");
input.setType(DataType.URI);
input.setValue("file:///home/airavata/input/hpcinput.tar");
InputDataObjectType input1 = new InputDataObjectType();
input1.setName("walltime");
input1.setType(DataType.STRING);
input1.setValue("-walltime=60");
InputDataObjectType input2 = new InputDataObjectType();
input2.setName("mgroupcount");
input2.setType(DataType.STRING);
input2.setValue("-mgroupcount=1");
exInputs.add(input);
exInputs.add(input1);
exInputs.add(input2);
List<OutputDataObjectType> exOut = new ArrayList<OutputDataObjectType>();
OutputDataObjectType output = new OutputDataObjectType();
output.setName("output");
output.setType(DataType.URI);
output.setValue("");
// OutputDataObjectType output1 = new OutputDataObjectType();
// output1.setName("stdout");
// output1.setType(DataType.STDOUT);
// output1.setValue("");
// OutputDataObjectType output2 = new OutputDataObjectType();
// output2.setName("stderr");
// output2.setType(DataType.STDERR);
// output2.setValue("");
exOut.add(output);
// exOut.add(output1);
// exOut.add(output2);
// Project project = ProjectModelUtil.createProject("project1", "admin", "test project");
// String projectId = client.createProject(project);
ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "ultrascan_41574ef5-b054-4d03-ab20-2cfe768d5096", "ultrascan", "US3ExperimentStampede", "US3AppStampede", "ultrascan_e76ab5cf-79f6-44df-a244-10a734183fec", exInputs);
simpleExperiment.setExperimentOutputs(exOut);
ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling("alamo.uthscsa.edu_7b6cf99a-af2e-4e8b-9eff-998a5ef60fe5", 4, 2, 0, "default", 30, 0);
scheduling.setResourceHostId("alamo.uthscsa.edu_7b6cf99a-af2e-4e8b-9eff-998a5ef60fe5");
UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
userConfigurationData.setAiravataAutoSchedule(false);
userConfigurationData.setOverrideManualScheduledParams(false);
userConfigurationData.setComputationalResourceScheduling(scheduling);
/* AdvancedOutputDataHandling dataHandling = new AdvancedOutputDataHandling();
dataHandling.setOutputDataDir("/home/airavata/output/");
userConfigurationData.setAdvanceOutputDataHandling(dataHandling);*/
simpleExperiment.setUserConfigurationData(userConfigurationData);
return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
} catch (AiravataSystemException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new AiravataSystemException(e);
} catch (InvalidRequestException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new InvalidRequestException(e);
} catch (AiravataClientException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new AiravataClientException(e);
} catch (TException e) {
logger.error("Error occured while creating the experiment...", e.getMessage());
throw new TException(e);
}
}
use of org.apache.airavata.model.error.InvalidRequestException in project airavata by apache.
the class ExperimentExecution method getProjects.
protected Map<String, List<Project>> getProjects(Map<String, String> tokenMap) throws Exception {
projectsMap = new HashMap<String, List<Project>>();
try {
if (tokenMap != null && !tokenMap.isEmpty()) {
for (String gatewayId : tokenMap.keySet()) {
List<Project> allUserProjects = airavata.getUserProjects(authzToken, gatewayId, testUser, 5, 0);
projectsMap.put(gatewayId, allUserProjects);
}
}
} catch (AiravataSystemException e) {
logger.error("Error while getting all user projects", e);
throw new Exception("Error while getting all user projects", e);
} catch (InvalidRequestException e) {
logger.error("Error while getting all user projects", e);
throw new Exception("Error while getting all user projects", e);
} catch (AiravataClientException e) {
logger.error("Error while getting all user projects", e);
throw new Exception("Error while getting all user projects", e);
} catch (TException e) {
logger.error("Error while getting all user projects", e);
throw new Exception("Error while getting all user projects", e);
}
return projectsMap;
}
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