Examples with UserConfigurationDataModel org.apache.airavata.model.experiment.UserConfigurationDataModel used on opensource projects

Example 11 with UserConfigurationDataModel

use of org.apache.airavata.model.experiment.UserConfigurationDataModel in project airavata by apache.

the class CreateLaunchExperiment method createEchoExperimentForTrestles.

public static String createEchoExperimentForTrestles(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), echoAppId);
        for (InputDataObjectType inputDataObjectType : exInputs) {
            if (inputDataObjectType.getName().equalsIgnoreCase("Input_to_Echo")) {
                inputDataObjectType.setValue("Hello World");
            }
        }
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), echoAppId);
        Project project = ProjectModelUtil.createProject("default", "admin", "test project");
        String projectId = client.createProject(new AuthzToken(""), DEFAULT_GATEWAY, project);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, projectId, "admin", "echoExperiment", "SimpleEcho3", echoAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), echoAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(trestlesHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 1, 1, "normal", 30, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}

Example 12 with UserConfigurationDataModel

use of org.apache.airavata.model.experiment.UserConfigurationDataModel in project airavata by apache.

the class CreateLaunchExperiment method createExperimentAUTODOCKStampede.

public static String createExperimentAUTODOCKStampede(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), nwchemAppId);
        setAUTODOCKInputs(exInputs);
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), nwchemAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "AutoDockExperiment", "Testing", autodockAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), autodockAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(stampedeHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 16, 1, "development", 30, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}

Example 13 with UserConfigurationDataModel

use of org.apache.airavata.model.experiment.UserConfigurationDataModel in project airavata by apache.

the class CreateLaunchExperiment method createExperimentWRFStampede.

public static String createExperimentWRFStampede(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), wrfAppId);
        setWRFInputs(exInputs);
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), wrfAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "WRFExperiment", "Testing", wrfAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), wrfAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(stampedeHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 2, 32, 1, "development", 90, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}

Example 14 with UserConfigurationDataModel

use of org.apache.airavata.model.experiment.UserConfigurationDataModel in project airavata by apache.

the class CreateLaunchExperiment method createExperimentWRFTrestles.

public static String createExperimentWRFTrestles(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), wrfAppId);
        setWRFInputs(exInputs);
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), wrfAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "WRFExperiment", "Testing", wrfAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), wrfAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(trestlesHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 1, 1, "normal", 30, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}

Example 15 with UserConfigurationDataModel

use of org.apache.airavata.model.experiment.UserConfigurationDataModel in project airavata by apache.

the class OrchestratorClientSample method storeExperimentDetail.

/*

    public static void main(String[] args) {
        try {
            AiravataUtils.setExecutionAsClient();
            sysUser = ClientSettings.getSetting(DEFAULT_USER);
            sysUserPwd = ClientSettings.getSetting(DEFAULT_USER_PASSWORD);
            gateway = ClientSettings.getSetting(DEFAULT_GATEWAY);
            orchestratorClient = OrchestratorClientFactory.createOrchestratorClient("localhost", 8940);
            registry = RegistryFactory.getRegistry(gateway, sysUser, sysUserPwd);
            documentCreator = new DocumentCreator(getAiravataAPI());
            documentCreator.createLocalHostDocs();
            documentCreator.createGramDocs();
            documentCreator.createPBSDocsForOGCE();
            storeExperimentDetail();
        } catch (ApplicationSettingsException e) {
            e.printStackTrace();
        } catch (RegistryException e) {
            e.printStackTrace();
        }

    }

    private static AiravataAPI getAiravataAPI() {
        AiravataAPI airavataAPI = null;
            try {
                airavataAPI = AiravataAPIFactory.getAPI(gateway, sysUser);
            } catch (AiravataAPIInvocationException e) {
                e.printStackTrace();
            }
        return airavataAPI;
    }
*/
public static void storeExperimentDetail() {
    for (int i = 0; i < NUM_CONCURRENT_REQUESTS; i++) {
        Thread thread = new Thread() {

            public void run() {
                List<InputDataObjectType> exInputs = new ArrayList<InputDataObjectType>();
                InputDataObjectType input = new InputDataObjectType();
                input.setName("echo_input");
                input.setType(DataType.STRING);
                input.setValue("echo_output=Hello World");
                exInputs.add(input);
                List<OutputDataObjectType> exOut = new ArrayList<OutputDataObjectType>();
                OutputDataObjectType output = new OutputDataObjectType();
                output.setName("echo_output");
                output.setType(DataType.STRING);
                output.setValue("");
                exOut.add(output);
                ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "echoExperiment", "SimpleEcho2", "SimpleEcho2", exInputs);
                simpleExperiment.setExperimentOutputs(exOut);
                ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling("trestles.sdsc.edu", 1, 1, 1, "normal", 0, 0);
                scheduling.setResourceHostId("gsissh-trestles");
                UserConfigurationDataModel userConfigurationDataModel = new UserConfigurationDataModel();
                userConfigurationDataModel.setComputationalResourceScheduling(scheduling);
                simpleExperiment.setUserConfigurationData(userConfigurationDataModel);
                String expId = null;
                try {
                // expId = (String) registry.add(ParentDataType.EXPERIMENT, simpleExperiment);
                } catch (Exception e) {
                    e.printStackTrace();
                }
                try {
                    orchestratorClient.launchExperiment(expId, "airavataToken");
                } catch (TException e) {
                    e.printStackTrace();
                }
            }
        };
        thread.start();
        try {
            thread.join();
        } catch (InterruptedException e) {
            e.printStackTrace();
        }
    }
}