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Example 36 with ComputationalResourceSchedulingModel

use of org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel in project airavata by apache.

the class SampleEchoExperiment method createEchoExperiment.

private void createEchoExperiment() throws TException {
    Project project = new Project();
    project.setName("default-project");
    project.setOwner(userId);
    String projectId = airavataClient.createProject(new AuthzToken(""), gatewayId, project);
    ExperimentModel experimentModel = new ExperimentModel();
    experimentModel.setExperimentName("dummy-echo-experiment");
    experimentModel.setProjectId(projectId);
    experimentModel.setUserName(userId);
    experimentModel.setGatewayId(gatewayId);
    experimentModel.setExecutionId(echoInterfaceId);
    UserConfigurationDataModel userConfigurationDataModel = new UserConfigurationDataModel();
    ComputationalResourceSchedulingModel computationalResourceSchedulingModel = new ComputationalResourceSchedulingModel();
    computationalResourceSchedulingModel.setNodeCount(1);
    computationalResourceSchedulingModel.setTotalCPUCount(1);
    computationalResourceSchedulingModel.setTotalPhysicalMemory(512);
    computationalResourceSchedulingModel.setResourceHostId(localhostId);
    userConfigurationDataModel.setComputationalResourceScheduling(computationalResourceSchedulingModel);
    experimentModel.setUserConfigurationData(userConfigurationDataModel);
    List<InputDataObjectType> experimentInputs = new ArrayList<>();
    experimentInputs.add(RegisterSampleApplicationsUtils.createAppInput("Input_to_Echo", "Hello World", DataType.STRING, null, 1, true, true, false, "A test string to Echo", null));
    experimentModel.setExperimentInputs(experimentInputs);
    experimentModel.setExperimentOutputs(airavataClient.getApplicationOutputs(new AuthzToken(""), echoInterfaceId));
    echoExperimentId = airavataClient.createExperiment(new AuthzToken(""), gatewayId, experimentModel);
}
Also used : Project(org.apache.airavata.model.workspace.Project) UserConfigurationDataModel(org.apache.airavata.model.experiment.UserConfigurationDataModel) InputDataObjectType(org.apache.airavata.model.application.io.InputDataObjectType) AuthzToken(org.apache.airavata.model.security.AuthzToken) ExperimentModel(org.apache.airavata.model.experiment.ExperimentModel) ArrayList(java.util.ArrayList) ComputationalResourceSchedulingModel(org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel)

Example 37 with ComputationalResourceSchedulingModel

use of org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel in project airavata by apache.

the class CreateLaunchBES method createEchoExperimentForFSD.

public static String createEchoExperimentForFSD(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), echoAppId);
        for (InputDataObjectType inputDataObjectType : exInputs) {
            if (inputDataObjectType.getName().equalsIgnoreCase("Input_to_Echo")) {
                inputDataObjectType.setValue("Hello World");
            } else if (inputDataObjectType.getName().equalsIgnoreCase("Input_to_Echo2")) {
                inputDataObjectType.setValue("http://www.textfiles.com/100/ad.txt");
            } else if (inputDataObjectType.getName().equalsIgnoreCase("Input_to_Echo3")) {
                inputDataObjectType.setValue("file:///tmp/test.txt");
            }
        }
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), echoAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "echoExperiment", "SimpleEcho2", echoAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), echoAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(unicoreHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 1, 1, "normal", 30, 1048576);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    userConfigurationData.setGenerateCert(false);
                    userConfigurationData.setUserDN("");
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}
Also used : TException(org.apache.thrift.TException) InputDataObjectType(org.apache.airavata.model.application.io.InputDataObjectType) ExperimentModel(org.apache.airavata.model.experiment.ExperimentModel) OutputDataObjectType(org.apache.airavata.model.application.io.OutputDataObjectType) UserConfigurationDataModel(org.apache.airavata.model.experiment.UserConfigurationDataModel) AuthzToken(org.apache.airavata.model.security.AuthzToken) ComputationalResourceSchedulingModel(org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel)

Example 38 with ComputationalResourceSchedulingModel

use of org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel in project airavata by apache.

the class CreateLaunchExperiment method createExperimentEchoForLocalHost.

public static String createExperimentEchoForLocalHost(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), echoAppId);
        for (InputDataObjectType inputDataObjectType : exInputs) {
            if (inputDataObjectType.getName().equalsIgnoreCase("Input_to_Echo")) {
                inputDataObjectType.setValue("Hello World");
            }
        }
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), echoAppId);
        Project project = ProjectModelUtil.createProject("project1", "admin", "test project");
        String projectId = client.createProject(new AuthzToken(""), DEFAULT_GATEWAY, project);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, projectId, "admin", "echoExperiment", "Echo Test", echoAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), echoAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(localHost)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 1, 1, "normal", 30, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}
Also used : TException(org.apache.thrift.TException) InputDataObjectType(org.apache.airavata.model.application.io.InputDataObjectType) ExperimentModel(org.apache.airavata.model.experiment.ExperimentModel) Project(org.apache.airavata.model.workspace.Project) OutputDataObjectType(org.apache.airavata.model.application.io.OutputDataObjectType) UserConfigurationDataModel(org.apache.airavata.model.experiment.UserConfigurationDataModel) AuthzToken(org.apache.airavata.model.security.AuthzToken) ComputationalResourceSchedulingModel(org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel)

Example 39 with ComputationalResourceSchedulingModel

use of org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel in project airavata by apache.

the class CreateLaunchExperiment method createExperimentGROMACSStampede.

public static String createExperimentGROMACSStampede(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), gromacsAppId);
        setGROMACSInputs(exInputs);
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), gromacsAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "GromacsExperiment", "Testing", gromacsAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), gromacsAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(stampedeHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 16, 1, "development", 30, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}
Also used : TException(org.apache.thrift.TException) InputDataObjectType(org.apache.airavata.model.application.io.InputDataObjectType) ExperimentModel(org.apache.airavata.model.experiment.ExperimentModel) OutputDataObjectType(org.apache.airavata.model.application.io.OutputDataObjectType) UserConfigurationDataModel(org.apache.airavata.model.experiment.UserConfigurationDataModel) AuthzToken(org.apache.airavata.model.security.AuthzToken) ComputationalResourceSchedulingModel(org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel)

Example 40 with ComputationalResourceSchedulingModel

use of org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel in project airavata by apache.

the class CreateLaunchExperiment method createExperimentLAMMPSStampede.

public static String createExperimentLAMMPSStampede(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), lammpsAppId);
        setLAMMPSInputs(exInputs);
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), lammpsAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "LAMMPSExperiment", "Testing", lammpsAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), lammpsAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(stampedeHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 16, 1, "development", 30, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}
Also used : TException(org.apache.thrift.TException) InputDataObjectType(org.apache.airavata.model.application.io.InputDataObjectType) ExperimentModel(org.apache.airavata.model.experiment.ExperimentModel) OutputDataObjectType(org.apache.airavata.model.application.io.OutputDataObjectType) UserConfigurationDataModel(org.apache.airavata.model.experiment.UserConfigurationDataModel) AuthzToken(org.apache.airavata.model.security.AuthzToken) ComputationalResourceSchedulingModel(org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel)

Aggregations

ComputationalResourceSchedulingModel (org.apache.airavata.model.scheduling.ComputationalResourceSchedulingModel)48 InputDataObjectType (org.apache.airavata.model.application.io.InputDataObjectType)36 OutputDataObjectType (org.apache.airavata.model.application.io.OutputDataObjectType)35 UserConfigurationDataModel (org.apache.airavata.model.experiment.UserConfigurationDataModel)35 ExperimentModel (org.apache.airavata.model.experiment.ExperimentModel)34 TException (org.apache.thrift.TException)32 AuthzToken (org.apache.airavata.model.security.AuthzToken)28 Project (org.apache.airavata.model.workspace.Project)17 ArrayList (java.util.ArrayList)14 AiravataClientException (org.apache.airavata.model.error.AiravataClientException)7 AiravataSystemException (org.apache.airavata.model.error.AiravataSystemException)7 InvalidRequestException (org.apache.airavata.model.error.InvalidRequestException)7 ComputeResourcePreference (org.apache.airavata.model.appcatalog.gatewayprofile.ComputeResourcePreference)4 ProcessModel (org.apache.airavata.model.process.ProcessModel)4 AiravataException (org.apache.airavata.common.exception.AiravataException)3 DocumentCreatorNew (org.apache.airavata.integration.tools.DocumentCreatorNew)3 BeforeTest (org.testng.annotations.BeforeTest)3 Test (org.testng.annotations.Test)3 URISyntaxException (java.net.URISyntaxException)2 Map (java.util.Map)2