Examples with AuthzToken org.apache.airavata.model.security.AuthzToken used on opensource projects

Example 26 with AuthzToken

use of org.apache.airavata.model.security.AuthzToken in project airavata by apache.

the class CreateLaunchExperiment method createExperimentTRINITYStampede.

public static String createExperimentTRINITYStampede(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), trinityAppId);
        setTRINITYInputs(exInputs);
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), trinityAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "TrinityExperiment", "Testing", trinityAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), trinityAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(stampedeHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 16, 1, "development", 30, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}

Example 27 with AuthzToken

use of org.apache.airavata.model.security.AuthzToken in project airavata by apache.

the class CreateLaunchExperiment method createEchoExperimentForTrestles.

public static String createEchoExperimentForTrestles(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), echoAppId);
        for (InputDataObjectType inputDataObjectType : exInputs) {
            if (inputDataObjectType.getName().equalsIgnoreCase("Input_to_Echo")) {
                inputDataObjectType.setValue("Hello World");
            }
        }
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), echoAppId);
        Project project = ProjectModelUtil.createProject("default", "admin", "test project");
        String projectId = client.createProject(new AuthzToken(""), DEFAULT_GATEWAY, project);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, projectId, "admin", "echoExperiment", "SimpleEcho3", echoAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), echoAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(trestlesHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 1, 1, "normal", 30, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}

Example 28 with AuthzToken

use of org.apache.airavata.model.security.AuthzToken in project airavata by apache.

the class CreateLaunchExperiment method createExperimentAUTODOCKStampede.

public static String createExperimentAUTODOCKStampede(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), nwchemAppId);
        setAUTODOCKInputs(exInputs);
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), nwchemAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "AutoDockExperiment", "Testing", autodockAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), autodockAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(stampedeHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 16, 1, "development", 30, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}

Example 29 with AuthzToken

use of org.apache.airavata.model.security.AuthzToken in project airavata by apache.

the class CreateLaunchExperiment method main.

public static void main(String[] args) throws Exception {
    airavataClient = AiravataClientFactory.createAiravataClient(THRIFT_SERVER_HOST, THRIFT_SERVER_PORT);
    AuthzToken token = new AuthzToken("empty_token");
    System.out.println("API version is " + airavataClient.getAPIVersion(token));
    // registerApplications(); // run this only the first time
    // Map<String, String> master = airavataClient.getAllUserSSHPubKeys(token, "master");
    // System.out.println(master.size());
    Map<String, JobStatus> jobStatuses = airavataClient.getJobStatuses(token, "SLM3-QEspresso-Stampede_dc2af008-a832-4fba-ab0a-4b61fa79f5b9");
    for (String jobId : jobStatuses.keySet()) {
        JobStatus jobStatus = jobStatuses.get(jobId);
        System.out.println(jobId);
        System.out.println(jobStatus.getJobState().toString());
    }
// createAndLaunchExp();
}

Example 30 with AuthzToken

use of org.apache.airavata.model.security.AuthzToken in project airavata by apache.

the class CreateLaunchExperiment method createExperimentWRFStampede.

public static String createExperimentWRFStampede(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), wrfAppId);
        setWRFInputs(exInputs);
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), wrfAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "WRFExperiment", "Testing", wrfAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), wrfAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(stampedeHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 2, 32, 1, "development", 90, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}