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Example 16 with WorkflowCatalogQueryGenerator

use of org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator in project airavata by apache.

the class NodeResource method getIds.

public List<String> getIds(String fieldName, Object value) throws WorkflowCatalogException {
    List<String> nodeResourceIds = new ArrayList<String>();
    EntityManager em = null;
    try {
        em = WorkflowCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        Query q;
        WorkflowCatalogQueryGenerator generator = new WorkflowCatalogQueryGenerator(NODE);
        List results;
        if (fieldName.equals(NodeConstants.TEMPLATE_ID)) {
            generator.setParameter(NodeConstants.TEMPLATE_ID, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    Node node = (Node) result;
                    nodeResourceIds.add(node.getTemplateId());
                }
            }
        } else {
            em.getTransaction().commit();
            if (em.isOpen()) {
                if (em.getTransaction().isActive()) {
                    em.getTransaction().rollback();
                }
                em.close();
            }
            logger.error("Unsupported field name for Workflow node resource.", new IllegalArgumentException());
            throw new IllegalArgumentException("Unsupported field name for Workflow node Resource.");
        }
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (Exception e) {
        logger.error(e.getMessage(), e);
        throw new WorkflowCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
    return nodeResourceIds;
}
Also used : EntityManager(javax.persistence.EntityManager) WorkflowCatalogException(org.apache.airavata.registry.cpi.WorkflowCatalogException) Query(javax.persistence.Query) WorkflowCatalogQueryGenerator(org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator) Node(org.apache.airavata.registry.core.workflow.catalog.model.Node) ArrayList(java.util.ArrayList) ArrayList(java.util.ArrayList) List(java.util.List) ApplicationSettingsException(org.apache.airavata.common.exception.ApplicationSettingsException) WorkflowCatalogException(org.apache.airavata.registry.cpi.WorkflowCatalogException)

Example 17 with WorkflowCatalogQueryGenerator

use of org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator in project airavata by apache.

the class PortResource method get.

public List<WorkflowCatalogResource> get(String fieldName, Object value) throws WorkflowCatalogException {
    List<WorkflowCatalogResource> portResources = new ArrayList<WorkflowCatalogResource>();
    EntityManager em = null;
    try {
        em = WorkflowCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        Query q;
        WorkflowCatalogQueryGenerator generator = new WorkflowCatalogQueryGenerator(PORT);
        List results;
        if (fieldName.equals(PortConstants.TEMPLATE_ID)) {
            generator.setParameter(PortConstants.TEMPLATE_ID, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    Port port = (Port) result;
                    PortResource portResource = (PortResource) WorkflowCatalogJPAUtils.getResource(WorkflowCatalogResourceType.PORT, port);
                    portResources.add(portResource);
                }
            }
        } else {
            em.getTransaction().commit();
            if (em.isOpen()) {
                if (em.getTransaction().isActive()) {
                    em.getTransaction().rollback();
                }
                em.close();
            }
            logger.error("Unsupported field name for Port Resource.", new IllegalArgumentException());
            throw new IllegalArgumentException("Unsupported field name for Port Resource.");
        }
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (Exception e) {
        logger.error(e.getMessage(), e);
        throw new WorkflowCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
    return portResources;
}
Also used : WorkflowCatalogException(org.apache.airavata.registry.cpi.WorkflowCatalogException) Query(javax.persistence.Query) Port(org.apache.airavata.registry.core.workflow.catalog.model.Port) ArrayList(java.util.ArrayList) ApplicationSettingsException(org.apache.airavata.common.exception.ApplicationSettingsException) WorkflowCatalogException(org.apache.airavata.registry.cpi.WorkflowCatalogException) EntityManager(javax.persistence.EntityManager) WorkflowCatalogQueryGenerator(org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator) ArrayList(java.util.ArrayList) List(java.util.List)

Example 18 with WorkflowCatalogQueryGenerator

use of org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator in project airavata by apache.

the class PortResource method getIds.

public List<String> getIds(String fieldName, Object value) throws WorkflowCatalogException {
    List<String> portResourceIds = new ArrayList<String>();
    EntityManager em = null;
    try {
        em = WorkflowCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        Query q;
        WorkflowCatalogQueryGenerator generator = new WorkflowCatalogQueryGenerator(PORT);
        List results;
        if (fieldName.equals(PortConstants.TEMPLATE_ID)) {
            generator.setParameter(PortConstants.TEMPLATE_ID, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    Port port = (Port) result;
                    portResourceIds.add(port.getTemplateId());
                }
            }
        } else {
            em.getTransaction().commit();
            if (em.isOpen()) {
                if (em.getTransaction().isActive()) {
                    em.getTransaction().rollback();
                }
                em.close();
            }
            logger.error("Unsupported field name for Workflow port resource.", new IllegalArgumentException());
            throw new IllegalArgumentException("Unsupported field name for Workflow port Resource.");
        }
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (Exception e) {
        logger.error(e.getMessage(), e);
        throw new WorkflowCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
    return portResourceIds;
}
Also used : EntityManager(javax.persistence.EntityManager) WorkflowCatalogException(org.apache.airavata.registry.cpi.WorkflowCatalogException) Query(javax.persistence.Query) WorkflowCatalogQueryGenerator(org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator) Port(org.apache.airavata.registry.core.workflow.catalog.model.Port) ArrayList(java.util.ArrayList) ArrayList(java.util.ArrayList) List(java.util.List) ApplicationSettingsException(org.apache.airavata.common.exception.ApplicationSettingsException) WorkflowCatalogException(org.apache.airavata.registry.cpi.WorkflowCatalogException)

Example 19 with WorkflowCatalogQueryGenerator

use of org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator in project airavata by apache.

the class WorkflowInputResource method remove.

public void remove(Object identifier) throws WorkflowCatalogException {
    HashMap<String, String> ids;
    if (identifier instanceof Map) {
        ids = (HashMap) identifier;
    } else {
        logger.error("Identifier should be a map with the field name and it's value");
        throw new WorkflowCatalogException("Identifier should be a map with the field name and it's value");
    }
    EntityManager em = null;
    try {
        em = WorkflowCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        WorkflowCatalogQueryGenerator generator = new WorkflowCatalogQueryGenerator(WORKFLOW_INPUT);
        generator.setParameter(WorkflowInputConstants.WF_TEMPLATE_ID, ids.get(WorkflowInputConstants.WF_TEMPLATE_ID));
        generator.setParameter(WorkflowInputConstants.INPUT_KEY, ids.get(WorkflowInputConstants.INPUT_KEY));
        Query q = generator.deleteQuery(em);
        q.executeUpdate();
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (ApplicationSettingsException e) {
        logger.error(e.getMessage(), e);
        throw new WorkflowCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
}
Also used : ApplicationSettingsException(org.apache.airavata.common.exception.ApplicationSettingsException) WorkflowCatalogException(org.apache.airavata.registry.cpi.WorkflowCatalogException) EntityManager(javax.persistence.EntityManager) Query(javax.persistence.Query) WorkflowCatalogQueryGenerator(org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator) HashMap(java.util.HashMap) Map(java.util.Map)

Example 20 with WorkflowCatalogQueryGenerator

use of org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator in project airavata by apache.

the class WorkflowInputResource method getIds.

public List<String> getIds(String fieldName, Object value) throws WorkflowCatalogException {
    List<String> wfInputResourceIDs = new ArrayList<String>();
    EntityManager em = null;
    try {
        em = WorkflowCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        Query q;
        WorkflowCatalogQueryGenerator generator = new WorkflowCatalogQueryGenerator(WORKFLOW_INPUT);
        List results;
        if (fieldName.equals(WorkflowInputConstants.WF_TEMPLATE_ID)) {
            generator.setParameter(WorkflowInputConstants.WF_TEMPLATE_ID, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    WorkflowInput workflowInput = (WorkflowInput) result;
                    wfInputResourceIDs.add(workflowInput.getTemplateID());
                }
            }
        } else if (fieldName.equals(WorkflowInputConstants.INPUT_KEY)) {
            generator.setParameter(WorkflowInputConstants.INPUT_KEY, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    WorkflowInput workflowInput = (WorkflowInput) result;
                    wfInputResourceIDs.add(workflowInput.getTemplateID());
                }
            }
        } else if (fieldName.equals(WorkflowInputConstants.DATA_TYPE)) {
            generator.setParameter(WorkflowInputConstants.DATA_TYPE, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    WorkflowInput workflowInput = (WorkflowInput) result;
                    wfInputResourceIDs.add(workflowInput.getTemplateID());
                }
            }
        } else {
            em.getTransaction().commit();
            if (em.isOpen()) {
                if (em.getTransaction().isActive()) {
                    em.getTransaction().rollback();
                }
                em.close();
            }
            logger.error("Unsupported field name for WFInput resource.", new IllegalArgumentException());
            throw new IllegalArgumentException("Unsupported field name for WFInput Resource.");
        }
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (Exception e) {
        logger.error(e.getMessage(), e);
        throw new WorkflowCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
    return wfInputResourceIDs;
}
Also used : EntityManager(javax.persistence.EntityManager) WorkflowCatalogException(org.apache.airavata.registry.cpi.WorkflowCatalogException) Query(javax.persistence.Query) WorkflowCatalogQueryGenerator(org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator) ArrayList(java.util.ArrayList) ArrayList(java.util.ArrayList) List(java.util.List) WorkflowInput(org.apache.airavata.registry.core.workflow.catalog.model.WorkflowInput) ApplicationSettingsException(org.apache.airavata.common.exception.ApplicationSettingsException) WorkflowCatalogException(org.apache.airavata.registry.cpi.WorkflowCatalogException)

Aggregations

EntityManager (javax.persistence.EntityManager)34 Query (javax.persistence.Query)34 ApplicationSettingsException (org.apache.airavata.common.exception.ApplicationSettingsException)34 WorkflowCatalogQueryGenerator (org.apache.airavata.registry.core.workflow.catalog.utils.WorkflowCatalogQueryGenerator)34 WorkflowCatalogException (org.apache.airavata.registry.cpi.WorkflowCatalogException)34 ArrayList (java.util.ArrayList)18 List (java.util.List)16 HashMap (java.util.HashMap)12 Map (java.util.Map)12 Workflow (org.apache.airavata.registry.core.workflow.catalog.model.Workflow)5 ComponentStatus (org.apache.airavata.registry.core.workflow.catalog.model.ComponentStatus)3 Edge (org.apache.airavata.registry.core.workflow.catalog.model.Edge)3 Node (org.apache.airavata.registry.core.workflow.catalog.model.Node)3 Port (org.apache.airavata.registry.core.workflow.catalog.model.Port)3 WorkflowInput (org.apache.airavata.registry.core.workflow.catalog.model.WorkflowInput)3 WorkflowOutput (org.apache.airavata.registry.core.workflow.catalog.model.WorkflowOutput)3 WorkflowStatus (org.apache.airavata.registry.core.workflow.catalog.model.WorkflowStatus)3