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Example 91 with AppCatalogException

use of org.apache.airavata.registry.cpi.AppCatalogException in project airavata by apache.

the class ApplicationInputResource method getIds.

public List<String> getIds(String fieldName, Object value) throws AppCatalogException {
    List<String> appInputResourceIDs = new ArrayList<String>();
    EntityManager em = null;
    try {
        em = AppCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        Query q;
        AppCatalogQueryGenerator generator = new AppCatalogQueryGenerator(APPLICATION_INPUT);
        List results;
        if (fieldName.equals(AppInputConstants.INTERFACE_ID)) {
            generator.setParameter(AppInputConstants.INTERFACE_ID, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    ApplicationIntInput applicationInput = (ApplicationIntInput) result;
                    appInputResourceIDs.add(applicationInput.getInterfaceID());
                }
            }
        } else if (fieldName.equals(AppInputConstants.INPUT_KEY)) {
            generator.setParameter(AppInputConstants.INPUT_KEY, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    ApplicationIntInput applicationInput = (ApplicationIntInput) result;
                    appInputResourceIDs.add(applicationInput.getInterfaceID());
                }
            }
        } else if (fieldName.equals(AppInputConstants.DATA_TYPE)) {
            generator.setParameter(AppInputConstants.DATA_TYPE, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    ApplicationIntInput applicationInput = (ApplicationIntInput) result;
                    appInputResourceIDs.add(applicationInput.getInterfaceID());
                }
            }
        } else {
            em.getTransaction().commit();
            if (em.isOpen()) {
                if (em.getTransaction().isActive()) {
                    em.getTransaction().rollback();
                }
                em.close();
            }
            logger.error("Unsupported field name for AppInput resource.", new IllegalArgumentException());
            throw new IllegalArgumentException("Unsupported field name for AppInput Resource.");
        }
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (Exception e) {
        logger.error(e.getMessage(), e);
        throw new AppCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
    return appInputResourceIDs;
}
Also used : EntityManager(javax.persistence.EntityManager) AppCatalogException(org.apache.airavata.registry.cpi.AppCatalogException) Query(javax.persistence.Query) ArrayList(java.util.ArrayList) ApplicationIntInput(org.apache.airavata.registry.core.app.catalog.model.ApplicationIntInput) ArrayList(java.util.ArrayList) List(java.util.List) AppCatalogQueryGenerator(org.apache.airavata.registry.core.app.catalog.util.AppCatalogQueryGenerator) AppCatalogException(org.apache.airavata.registry.cpi.AppCatalogException) ApplicationSettingsException(org.apache.airavata.common.exception.ApplicationSettingsException)

Example 92 with AppCatalogException

use of org.apache.airavata.registry.cpi.AppCatalogException in project airavata by apache.

the class ApplicationOutputResource method save.

public void save() throws AppCatalogException {
    EntityManager em = null;
    try {
        em = AppCatalogJPAUtils.getEntityManager();
        ApplicationIntOutput existingApplicationOutput = em.find(ApplicationIntOutput.class, new AppOutput_PK(interfaceID, outputKey));
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
        ApplicationIntOutput applicationOutput;
        em = AppCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        if (existingApplicationOutput == null) {
            applicationOutput = new ApplicationIntOutput();
        } else {
            applicationOutput = existingApplicationOutput;
        }
        ApplicationInterface applicationInterface = em.find(ApplicationInterface.class, interfaceID);
        applicationOutput.setApplicationInterface(applicationInterface);
        applicationOutput.setInterfaceID(applicationInterface.getInterfaceID());
        applicationOutput.setDataType(dataType);
        applicationOutput.setOutputKey(outputKey);
        applicationOutput.setOutputVal(outputVal);
        applicationOutput.setRequired(isRequired);
        applicationOutput.setRequiredToCMD(requiredToCMD);
        applicationOutput.setDataMovement(dataMovement);
        applicationOutput.setDataNameLocation(dataNameLocation);
        applicationOutput.setSearchQuery(searchQuery);
        applicationOutput.setApplicationArgument(appArgument);
        applicationOutput.setOutputStreaming(outputStreaming);
        em.merge(applicationOutput);
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (Exception e) {
        logger.error(e.getMessage(), e);
        throw new AppCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
}
Also used : EntityManager(javax.persistence.EntityManager) AppOutput_PK(org.apache.airavata.registry.core.app.catalog.model.AppOutput_PK) AppCatalogException(org.apache.airavata.registry.cpi.AppCatalogException) ApplicationIntOutput(org.apache.airavata.registry.core.app.catalog.model.ApplicationIntOutput) ApplicationInterface(org.apache.airavata.registry.core.app.catalog.model.ApplicationInterface) AppCatalogException(org.apache.airavata.registry.cpi.AppCatalogException) ApplicationSettingsException(org.apache.airavata.common.exception.ApplicationSettingsException)

Example 93 with AppCatalogException

use of org.apache.airavata.registry.cpi.AppCatalogException in project airavata by apache.

the class CloudSubmissionResource method remove.

@Override
public void remove(Object identifier) throws AppCatalogException {
    EntityManager em = null;
    try {
        em = AppCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        AppCatalogQueryGenerator generator = new AppCatalogQueryGenerator(CLOUD_JOB_SUBMISSION);
        generator.setParameter(LocalSubmissionConstants.JOB_SUBMISSION_INTERFACE_ID, identifier);
        Query q = generator.deleteQuery(em);
        q.executeUpdate();
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (ApplicationSettingsException e) {
        logger.error(e.getMessage(), e);
        throw new AppCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
}
Also used : ApplicationSettingsException(org.apache.airavata.common.exception.ApplicationSettingsException) EntityManager(javax.persistence.EntityManager) AppCatalogException(org.apache.airavata.registry.cpi.AppCatalogException) Query(javax.persistence.Query) AppCatalogQueryGenerator(org.apache.airavata.registry.core.app.catalog.util.AppCatalogQueryGenerator)

Example 94 with AppCatalogException

use of org.apache.airavata.registry.cpi.AppCatalogException in project airavata by apache.

the class CloudSubmissionResource method get.

@Override
public AppCatalogResource get(Object identifier) throws AppCatalogException {
    EntityManager em = null;
    try {
        em = AppCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        AppCatalogQueryGenerator generator = new AppCatalogQueryGenerator(CLOUD_JOB_SUBMISSION);
        generator.setParameter(LocalSubmissionConstants.JOB_SUBMISSION_INTERFACE_ID, identifier);
        Query q = generator.selectQuery(em);
        CloudJobSubmission cloudJobSubmission = (CloudJobSubmission) q.getSingleResult();
        CloudSubmissionResource localSubmissionResource = (CloudSubmissionResource) AppCatalogJPAUtils.getResource(AppCatalogResourceType.ClOUD_SUBMISSION, cloudJobSubmission);
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
        return localSubmissionResource;
    } catch (ApplicationSettingsException e) {
        logger.error(e.getMessage(), e);
        throw new AppCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
}
Also used : ApplicationSettingsException(org.apache.airavata.common.exception.ApplicationSettingsException) EntityManager(javax.persistence.EntityManager) AppCatalogException(org.apache.airavata.registry.cpi.AppCatalogException) Query(javax.persistence.Query) CloudJobSubmission(org.apache.airavata.registry.core.app.catalog.model.CloudJobSubmission) AppCatalogQueryGenerator(org.apache.airavata.registry.core.app.catalog.util.AppCatalogQueryGenerator)

Example 95 with AppCatalogException

use of org.apache.airavata.registry.cpi.AppCatalogException in project airavata by apache.

the class BatchQueueResource method get.

@Override
public AppCatalogResource get(Object identifier) throws AppCatalogException {
    HashMap<String, String> ids;
    if (identifier instanceof Map) {
        ids = (HashMap<String, String>) identifier;
    } else {
        logger.error("Identifier should be a map with the field name and it's value");
        throw new AppCatalogException("Identifier should be a map with the field name and it's value");
    }
    EntityManager em = null;
    try {
        em = AppCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        AppCatalogQueryGenerator generator = new AppCatalogQueryGenerator(BATCH_QUEUE);
        generator.setParameter(BatchQueueConstants.COMPUTE_RESOURCE_ID, ids.get(BatchQueueConstants.COMPUTE_RESOURCE_ID));
        generator.setParameter(BatchQueueConstants.QUEUE_NAME, ids.get(BatchQueueConstants.QUEUE_NAME));
        Query q = generator.selectQuery(em);
        BatchQueue batchQueue = (BatchQueue) q.getSingleResult();
        BatchQueueResource batchQueueResource = (BatchQueueResource) AppCatalogJPAUtils.getResource(AppCatalogResourceType.BATCH_QUEUE, batchQueue);
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
        return batchQueueResource;
    } catch (ApplicationSettingsException e) {
        logger.error(e.getMessage(), e);
        throw new AppCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
}
Also used : ApplicationSettingsException(org.apache.airavata.common.exception.ApplicationSettingsException) AppCatalogException(org.apache.airavata.registry.cpi.AppCatalogException) EntityManager(javax.persistence.EntityManager) Query(javax.persistence.Query) BatchQueue(org.apache.airavata.registry.core.app.catalog.model.BatchQueue) AppCatalogQueryGenerator(org.apache.airavata.registry.core.app.catalog.util.AppCatalogQueryGenerator) HashMap(java.util.HashMap) Map(java.util.Map)

Aggregations

AppCatalogException (org.apache.airavata.registry.cpi.AppCatalogException)353 ApplicationSettingsException (org.apache.airavata.common.exception.ApplicationSettingsException)268 EntityManager (javax.persistence.EntityManager)261 Query (javax.persistence.Query)176 AppCatalogQueryGenerator (org.apache.airavata.registry.core.app.catalog.util.AppCatalogQueryGenerator)176 ArrayList (java.util.ArrayList)94 HashMap (java.util.HashMap)70 Map (java.util.Map)54 List (java.util.List)42 CompositeIdentifier (org.apache.airavata.registry.cpi.CompositeIdentifier)22 ComputeResource (org.apache.airavata.registry.core.app.catalog.model.ComputeResource)14 ApplicationDeployment (org.apache.airavata.registry.core.app.catalog.model.ApplicationDeployment)13 ApplicationInterface (org.apache.airavata.registry.core.app.catalog.model.ApplicationInterface)10 ApplicationModule (org.apache.airavata.registry.core.app.catalog.model.ApplicationModule)8 GatewayProfile (org.apache.airavata.registry.core.app.catalog.model.GatewayProfile)6 ResourceJobManager (org.apache.airavata.registry.core.app.catalog.model.ResourceJobManager)6 StorageResource (org.apache.airavata.registry.core.app.catalog.model.StorageResource)6 Initialize (org.apache.airavata.app.catalog.util.Initialize)5 ProcessContext (org.apache.airavata.gfac.core.context.ProcessContext)5 GSISSHSubmission (org.apache.airavata.registry.core.app.catalog.model.GSISSHSubmission)5