Examples with RegistryException org.apache.airavata.registry.cpi.RegistryException used on opensource projects

Example 21 with RegistryException

use of org.apache.airavata.registry.cpi.RegistryException in project airavata by apache.

the class ExperimentRegistry method removeUserConfigData.

public void removeUserConfigData(String experimentId) throws RegistryException {
    try {
        ExperimentResource experiment = new ExperimentResource();
        experiment.setExperimentId(experimentId);
        experiment.remove(ResourceType.USER_CONFIGURATION_DATA, experimentId);
    } catch (Exception e) {
        logger.error("Error while removing experiment config..", e);
        throw new RegistryException(e);
    }
}

Example 22 with RegistryException

use of org.apache.airavata.registry.cpi.RegistryException in project airavata by apache.

the class ExperimentRegistry method searchAllAccessibleExperiments.

public List<ExperimentSummaryModel> searchAllAccessibleExperiments(List<String> accessibleIds, Map<String, String> filters, int limit, int offset, Object orderByIdentifier, ResultOrderType resultOrderType) throws RegistryException {
    Map<String, String> fil = new HashMap<String, String>();
    if (filters != null && filters.size() != 0) {
        List<ExperimentSummaryModel> experimentSummaries = new ArrayList<>();
        long fromTime = 0;
        long toTime = 0;
        try {
            for (String field : filters.keySet()) {
                if (field.equals(Constants.FieldConstants.ExperimentConstants.EXPERIMENT_NAME)) {
                    fil.put(AbstractExpCatResource.ExperimentConstants.EXPERIMENT_NAME, filters.get(field));
                } else if (field.equals(Constants.FieldConstants.ExperimentConstants.USER_NAME)) {
                    fil.put(AbstractExpCatResource.ExperimentConstants.USER_NAME, filters.get(field));
                } else if (field.equals(Constants.FieldConstants.ExperimentConstants.PROJECT_ID)) {
                    fil.put(AbstractExpCatResource.ExperimentConstants.PROJECT_ID, filters.get(field));
                } else if (field.equals(Constants.FieldConstants.ExperimentConstants.GATEWAY_ID)) {
                    fil.put(AbstractExpCatResource.ExperimentConstants.GATEWAY_ID, filters.get(field));
                } else if (field.equals(Constants.FieldConstants.ExperimentConstants.DESCRIPTION)) {
                    fil.put(AbstractExpCatResource.ExperimentConstants.DESCRIPTION, filters.get(field));
                } else if (field.equals(Constants.FieldConstants.ExperimentConstants.EXECUTION_ID)) {
                    fil.put(AbstractExpCatResource.ExperimentConstants.EXECUTION_ID, filters.get(field));
                } else if (field.equals(Constants.FieldConstants.ExperimentConstants.EXPERIMENT_STATUS)) {
                    fil.put(AbstractExpCatResource.ExperimentStatusConstants.STATE, filters.get(field));
                } else if (field.equals(Constants.FieldConstants.ExperimentConstants.FROM_DATE)) {
                    fromTime = Long.parseLong(filters.get(field));
                } else if (field.equals(Constants.FieldConstants.ExperimentConstants.TO_DATE)) {
                    toTime = Long.parseLong(filters.get(field));
                }
            }
            List<ExperimentSummaryResource> experimentSummaryResources;
            if (fromTime != 0 && toTime != 0) {
                experimentSummaryResources = workerResource.searchExperiments(accessibleIds, new Timestamp(fromTime), new Timestamp(toTime), fil, limit, offset, orderByIdentifier, resultOrderType);
            } else {
                experimentSummaryResources = workerResource.searchExperiments(accessibleIds, null, null, fil, limit, offset, orderByIdentifier, resultOrderType);
            }
            if (experimentSummaryResources != null && !experimentSummaryResources.isEmpty()) {
                for (ExperimentSummaryResource ex : experimentSummaryResources) {
                    experimentSummaries.add(ThriftDataModelConversion.getExperimentSummary(ex));
                }
            }
            return experimentSummaries;
        } catch (Exception e) {
            logger.error("Error while retrieving experiment summary from registry", e);
            throw new RegistryException(e);
        }
    }
    return null;
}

Example 23 with RegistryException

use of org.apache.airavata.registry.cpi.RegistryException in project airavata by apache.

the class ExperimentRegistry method addExperimentStatus.

public String addExperimentStatus(ExperimentStatus experimentStatus, String expId) throws RegistryException {
    try {
        ExperimentResource experiment = new ExperimentResource();
        experiment.setExperimentId(expId);
        ExperimentStatusResource status = experiment.getExperimentStatus();
        ExperimentState newState = experimentStatus.getState();
        if (status == null) {
            status = (ExperimentStatusResource) experiment.create(ResourceType.EXPERIMENT_STATUS);
            status.setStatusId(getStatusID("EXPERIMENT_STATE"));
        } else {
            String state = status.getState();
            if (newState != null && !state.equals(newState.toString())) {
                status.setStatusId(getStatusID("EXPERIMENT_STATE"));
            }
        }
        status.setExperimentId(expId);
        status.setTimeOfStateChange(AiravataUtils.getTime(experimentStatus.getTimeOfStateChange()));
        if (newState != null) {
            status.setState(newState.toString());
        }
        status.setReason(experimentStatus.getReason());
        status.save();
        logger.debug(expId, "Added experiment {} status to {}.", expId, experimentStatus.toString());
    } catch (Exception e) {
        logger.error(expId, "Error while adding experiment status...", e);
        throw new RegistryException(e);
    }
    return expId;
}

Example 24 with RegistryException

use of org.apache.airavata.registry.cpi.RegistryException in project airavata by apache.

the class ExperimentRegistry method addUserConfigData.

public String addUserConfigData(UserConfigurationDataModel configurationData, String experimentId) throws RegistryException {
    try {
        UserConfigurationDataResource configDataResource = new UserConfigurationDataResource();
        configDataResource.setExperimentId(experimentId);
        configDataResource.setAiravataAutoSchedule(configurationData.isAiravataAutoSchedule());
        configDataResource.setOverrideManualScheduledParams(configurationData.isOverrideManualScheduledParams());
        configDataResource.setShareExperimentPublically(configurationData.isShareExperimentPublicly());
        configDataResource.setThrottleResources(configurationData.isThrottleResources());
        configDataResource.setUserDn(configurationData.getUserDN());
        configDataResource.setGenerateCert(configurationData.isGenerateCert());
        configDataResource.setResourceHostId(configurationData.getComputationalResourceScheduling().getResourceHostId());
        configDataResource.setTotalCpuCount(configurationData.getComputationalResourceScheduling().getTotalCPUCount());
        configDataResource.setNodeCount(configurationData.getComputationalResourceScheduling().getNodeCount());
        configDataResource.setNumberOfThreads(configurationData.getComputationalResourceScheduling().getNumberOfThreads());
        configDataResource.setQueueName(configurationData.getComputationalResourceScheduling().getQueueName());
        configDataResource.setWallTimeLimit(configurationData.getComputationalResourceScheduling().getWallTimeLimit());
        configDataResource.setTotalPhysicalMemory(configurationData.getComputationalResourceScheduling().getTotalPhysicalMemory());
        configDataResource.setStaticWorkingDir(configurationData.getComputationalResourceScheduling().getStaticWorkingDir());
        configDataResource.setStorageId(configurationData.getStorageId());
        configDataResource.setExperimentDataDir(configurationData.getExperimentDataDir());
        configDataResource.setUseUserCRPref(configurationData.isUseUserCRPref());
        configDataResource.setOverrideLoginUserName(configurationData.getComputationalResourceScheduling().getOverrideLoginUserName());
        configDataResource.setOverrideScratchLocation(configurationData.getComputationalResourceScheduling().getOverrideScratchLocation());
        configDataResource.setOverrideAllocationProjectNumber(configurationData.getComputationalResourceScheduling().getOverrideAllocationProjectNumber());
        configDataResource.save();
    } catch (Exception e) {
        logger.error("Unable to save user config data", e);
        throw new RegistryException(e);
    }
    return experimentId;
}

Example 25 with RegistryException

use of org.apache.airavata.registry.cpi.RegistryException in project airavata by apache.

the class ExperimentRegistry method updateJob.

public String updateJob(JobModel job, CompositeIdentifier cis) throws RegistryException {
    String taskId = (String) cis.getTopLevelIdentifier();
    String jobId = (String) cis.getSecondLevelIdentifier();
    try {
        TaskResource taskResource = new TaskResource();
        taskResource.setTaskId(taskId);
        JobResource jobResource = taskResource.getJob(jobId);
        jobResource.setJobId(jobId);
        jobResource.setTaskId(job.getTaskId());
        jobResource.setProcessId(job.getProcessId());
        jobResource.setJobDescription(job.getJobDescription());
        jobResource.setCreationTime(AiravataUtils.getTime(job.getCreationTime()));
        jobResource.setComputeResourceConsumed(job.getComputeResourceConsumed());
        jobResource.setJobName(job.getJobName());
        jobResource.setWorkingDir(job.getWorkingDir());
        jobResource.setStdOut(job.getStdOut());
        jobResource.setStdErr(job.getStdErr());
        jobResource.setExitCode(job.getExitCode());
        jobResource.save();
    } catch (Exception e) {
        logger.error(jobId, "Error while adding job...", e);
        throw new RegistryException(e);
    }
    return jobId;
}