Examples with WorkflowCatalogException org.apache.airavata.registry.cpi.WorkflowCatalogException used on opensource projects

Example 36 with WorkflowCatalogException

use of org.apache.airavata.registry.cpi.WorkflowCatalogException in project airavata by apache.

the class WorkflowInputResource method getIds.

public List<String> getIds(String fieldName, Object value) throws WorkflowCatalogException {
    List<String> wfInputResourceIDs = new ArrayList<String>();
    EntityManager em = null;
    try {
        em = WorkflowCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        Query q;
        WorkflowCatalogQueryGenerator generator = new WorkflowCatalogQueryGenerator(WORKFLOW_INPUT);
        List results;
        if (fieldName.equals(WorkflowInputConstants.WF_TEMPLATE_ID)) {
            generator.setParameter(WorkflowInputConstants.WF_TEMPLATE_ID, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    WorkflowInput workflowInput = (WorkflowInput) result;
                    wfInputResourceIDs.add(workflowInput.getTemplateID());
                }
            }
        } else if (fieldName.equals(WorkflowInputConstants.INPUT_KEY)) {
            generator.setParameter(WorkflowInputConstants.INPUT_KEY, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    WorkflowInput workflowInput = (WorkflowInput) result;
                    wfInputResourceIDs.add(workflowInput.getTemplateID());
                }
            }
        } else if (fieldName.equals(WorkflowInputConstants.DATA_TYPE)) {
            generator.setParameter(WorkflowInputConstants.DATA_TYPE, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    WorkflowInput workflowInput = (WorkflowInput) result;
                    wfInputResourceIDs.add(workflowInput.getTemplateID());
                }
            }
        } else {
            em.getTransaction().commit();
            if (em.isOpen()) {
                if (em.getTransaction().isActive()) {
                    em.getTransaction().rollback();
                }
                em.close();
            }
            logger.error("Unsupported field name for WFInput resource.", new IllegalArgumentException());
            throw new IllegalArgumentException("Unsupported field name for WFInput Resource.");
        }
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (Exception e) {
        logger.error(e.getMessage(), e);
        throw new WorkflowCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
    return wfInputResourceIDs;
}

Example 37 with WorkflowCatalogException

use of org.apache.airavata.registry.cpi.WorkflowCatalogException in project airavata by apache.

the class WorkflowOutputResource method isExists.

public boolean isExists(Object identifier) throws WorkflowCatalogException {
    HashMap<String, String> ids;
    if (identifier instanceof Map) {
        ids = (HashMap) identifier;
    } else {
        logger.error("Identifier should be a map with the field name and it's value");
        throw new WorkflowCatalogException("Identifier should be a map with the field name and it's value");
    }
    EntityManager em = null;
    try {
        em = WorkflowCatalogJPAUtils.getEntityManager();
        WorkflowOutput workflowOutput = em.find(WorkflowOutput.class, new WorkflowOutput_PK(ids.get(WorkflowOutputConstants.WF_TEMPLATE_ID), ids.get(WorkflowOutputConstants.OUTPUT_KEY)));
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
        return workflowOutput != null;
    } catch (ApplicationSettingsException e) {
        logger.error(e.getMessage(), e);
        throw new WorkflowCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
}

Example 38 with WorkflowCatalogException

use of org.apache.airavata.registry.cpi.WorkflowCatalogException in project airavata by apache.

the class WorkflowOutputResource method get.

public List<WorkflowCatalogResource> get(String fieldName, Object value) throws WorkflowCatalogException {
    List<WorkflowCatalogResource> wfOutputResources = new ArrayList<WorkflowCatalogResource>();
    EntityManager em = null;
    try {
        em = WorkflowCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        Query q;
        WorkflowCatalogQueryGenerator generator = new WorkflowCatalogQueryGenerator(WORKFLOW_OUTPUT);
        List results;
        if (fieldName.equals(WorkflowOutputConstants.WF_TEMPLATE_ID)) {
            generator.setParameter(WorkflowOutputConstants.WF_TEMPLATE_ID, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    WorkflowOutput wfOutput = (WorkflowOutput) result;
                    WorkflowOutputResource workflowOutputResource = (WorkflowOutputResource) WorkflowCatalogJPAUtils.getResource(WorkflowCatalogResourceType.WORKFLOW_OUTPUT, wfOutput);
                    wfOutputResources.add(workflowOutputResource);
                }
            }
        } else if (fieldName.equals(WorkflowOutputConstants.OUTPUT_KEY)) {
            generator.setParameter(WorkflowOutputConstants.OUTPUT_KEY, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    WorkflowOutput workflowOutput = (WorkflowOutput) result;
                    WorkflowOutputResource workflowOutputResource = (WorkflowOutputResource) WorkflowCatalogJPAUtils.getResource(WorkflowCatalogResourceType.WORKFLOW_OUTPUT, workflowOutput);
                    wfOutputResources.add(workflowOutputResource);
                }
            }
        } else if (fieldName.equals(WorkflowOutputConstants.DATA_TYPE)) {
            generator.setParameter(WorkflowOutputConstants.DATA_TYPE, value);
            q = generator.selectQuery(em);
            results = q.getResultList();
            if (results.size() != 0) {
                for (Object result : results) {
                    WorkflowOutput workflowOutput = (WorkflowOutput) result;
                    WorkflowOutputResource workflowOutputResource = (WorkflowOutputResource) WorkflowCatalogJPAUtils.getResource(WorkflowCatalogResourceType.WORKFLOW_OUTPUT, workflowOutput);
                    wfOutputResources.add(workflowOutputResource);
                }
            }
        } else {
            em.getTransaction().commit();
            if (em.isOpen()) {
                if (em.getTransaction().isActive()) {
                    em.getTransaction().rollback();
                }
                em.close();
            }
            logger.error("Unsupported field name for WF Output Resource.", new IllegalArgumentException());
            throw new IllegalArgumentException("Unsupported field name for WF Output Resource.");
        }
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (Exception e) {
        logger.error(e.getMessage(), e);
        throw new WorkflowCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
    return wfOutputResources;
}

Example 39 with WorkflowCatalogException

use of org.apache.airavata.registry.cpi.WorkflowCatalogException in project airavata by apache.

the class WorkflowOutputResource method remove.

public void remove(Object identifier) throws WorkflowCatalogException {
    HashMap<String, String> ids;
    if (identifier instanceof Map) {
        ids = (HashMap) identifier;
    } else {
        logger.error("Identifier should be a map with the field name and it's value");
        throw new WorkflowCatalogException("Identifier should be a map with the field name and it's value");
    }
    EntityManager em = null;
    try {
        em = WorkflowCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        WorkflowCatalogQueryGenerator generator = new WorkflowCatalogQueryGenerator(WORKFLOW_OUTPUT);
        generator.setParameter(WorkflowOutputConstants.WF_TEMPLATE_ID, ids.get(WorkflowOutputConstants.WF_TEMPLATE_ID));
        generator.setParameter(WorkflowOutputConstants.OUTPUT_KEY, ids.get(WorkflowOutputConstants.OUTPUT_KEY));
        Query q = generator.deleteQuery(em);
        q.executeUpdate();
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (ApplicationSettingsException e) {
        logger.error(e.getMessage(), e);
        throw new WorkflowCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
}

Example 40 with WorkflowCatalogException

use of org.apache.airavata.registry.cpi.WorkflowCatalogException in project airavata by apache.

the class WorkflowOutputResource method save.

public void save() throws WorkflowCatalogException {
    EntityManager em = null;
    try {
        em = WorkflowCatalogJPAUtils.getEntityManager();
        WorkflowOutput existingWorkflowOutput = em.find(WorkflowOutput.class, new WorkflowOutput_PK(wfTemplateId, outputKey));
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
        em = WorkflowCatalogJPAUtils.getEntityManager();
        em.getTransaction().begin();
        if (existingWorkflowOutput != null) {
            existingWorkflowOutput.setTemplateId(wfTemplateId);
            Workflow workflow = em.find(Workflow.class, wfTemplateId);
            existingWorkflowOutput.setWorkflow(workflow);
            existingWorkflowOutput.setDataType(dataType);
            existingWorkflowOutput.setOutputKey(outputKey);
            if (outputVal != null) {
                existingWorkflowOutput.setOutputVal(outputVal.toCharArray());
            }
            existingWorkflowOutput.setDataMovement(dataMovement);
            existingWorkflowOutput.setDataNameLocation(dataNameLocation);
            em.merge(existingWorkflowOutput);
        } else {
            WorkflowOutput workflowOutput = new WorkflowOutput();
            workflowOutput.setTemplateId(wfTemplateId);
            Workflow workflow = em.find(Workflow.class, wfTemplateId);
            workflowOutput.setWorkflow(workflow);
            workflowOutput.setDataType(dataType);
            workflowOutput.setOutputKey(outputKey);
            if (outputVal != null) {
                workflowOutput.setOutputVal(outputVal.toCharArray());
            }
            workflowOutput.setDataMovement(dataMovement);
            workflowOutput.setDataNameLocation(dataNameLocation);
            em.persist(workflowOutput);
        }
        em.getTransaction().commit();
        if (em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    } catch (Exception e) {
        logger.error(e.getMessage(), e);
        throw new WorkflowCatalogException(e);
    } finally {
        if (em != null && em.isOpen()) {
            if (em.getTransaction().isActive()) {
                em.getTransaction().rollback();
            }
            em.close();
        }
    }
}