use of org.apache.beam.runners.core.construction.graph.PipelineNode.PCollectionNode in project beam by apache.
the class QueryablePipelineTest method transformWithSideAndMainInputs.
/**
* Tests that inputs that are only side inputs are not returned from {@link
* QueryablePipeline#getPerElementConsumers(PCollectionNode)} and are returned from {@link
* QueryablePipeline#getSideInputs(PTransformNode)}.
*/
@Test
public void transformWithSideAndMainInputs() {
Pipeline p = Pipeline.create();
PCollection<byte[]> impulse = p.apply("Impulse", Impulse.create());
PCollectionView<String> view = p.apply("Create", Create.of("foo")).apply("View", View.asSingleton());
impulse.apply("par_do", ParDo.of(new TestFn()).withSideInputs(view).withOutputTags(new TupleTag<>(), TupleTagList.empty()));
Components components = PipelineTranslation.toProto(p).getComponents();
QueryablePipeline qp = QueryablePipeline.forPrimitivesIn(components);
String mainInputName = getOnlyElement(PipelineNode.pTransform("Impulse", components.getTransformsOrThrow("Impulse")).getTransform().getOutputsMap().values());
PCollectionNode mainInput = PipelineNode.pCollection(mainInputName, components.getPcollectionsOrThrow(mainInputName));
PTransform parDoTransform = components.getTransformsOrThrow("par_do");
String sideInputLocalName = getOnlyElement(parDoTransform.getInputsMap().entrySet().stream().filter(entry -> !entry.getValue().equals(mainInputName)).map(Map.Entry::getKey).collect(Collectors.toSet()));
String sideInputCollectionId = parDoTransform.getInputsOrThrow(sideInputLocalName);
PCollectionNode sideInput = PipelineNode.pCollection(sideInputCollectionId, components.getPcollectionsOrThrow(sideInputCollectionId));
PTransformNode parDoNode = PipelineNode.pTransform("par_do", components.getTransformsOrThrow("par_do"));
SideInputReference sideInputRef = SideInputReference.of(parDoNode, sideInputLocalName, sideInput);
assertThat(qp.getSideInputs(parDoNode), contains(sideInputRef));
assertThat(qp.getPerElementConsumers(mainInput), contains(parDoNode));
assertThat(qp.getPerElementConsumers(sideInput), not(contains(parDoNode)));
}
use of org.apache.beam.runners.core.construction.graph.PipelineNode.PCollectionNode in project beam by apache.
the class QueryablePipelineTest method getProducer.
@Test
public void getProducer() {
Pipeline p = Pipeline.create();
PCollection<Long> longs = p.apply("BoundedRead", Read.from(CountingSource.upTo(100L)));
PCollectionList.of(longs).and(longs).and(longs).apply("flatten", Flatten.pCollections());
Components components = PipelineTranslation.toProto(p).getComponents();
QueryablePipeline qp = QueryablePipeline.forPrimitivesIn(components);
String impulseOutputName = getOnlyElement(PipelineNode.pTransform("BoundedRead-Impulse", components.getTransformsOrThrow("BoundedRead-Impulse")).getTransform().getOutputsMap().values());
PTransformNode impulseProducer = PipelineNode.pTransform("BoundedRead-Impulse", components.getTransformsOrThrow("BoundedRead-Impulse"));
PCollectionNode impulseOutput = PipelineNode.pCollection(impulseOutputName, components.getPcollectionsOrThrow(impulseOutputName));
String flattenOutputName = getOnlyElement(PipelineNode.pTransform("flatten", components.getTransformsOrThrow("flatten")).getTransform().getOutputsMap().values());
PTransformNode flattenProducer = PipelineNode.pTransform("flatten", components.getTransformsOrThrow("flatten"));
PCollectionNode flattenOutput = PipelineNode.pCollection(flattenOutputName, components.getPcollectionsOrThrow(flattenOutputName));
assertThat(qp.getProducer(impulseOutput), equalTo(impulseProducer));
assertThat(qp.getProducer(flattenOutput), equalTo(flattenProducer));
}
use of org.apache.beam.runners.core.construction.graph.PipelineNode.PCollectionNode in project beam by apache.
the class CreateExecutableStageNodeFunction method apply.
@Override
public Node apply(MutableNetwork<Node, Edge> input) {
for (Node node : input.nodes()) {
if (node instanceof RemoteGrpcPortNode || node instanceof ParallelInstructionNode || node instanceof InstructionOutputNode) {
continue;
}
throw new IllegalArgumentException(String.format("Network contains unknown type of node: %s", input));
}
// Fix all non output nodes to have named edges.
for (Node node : input.nodes()) {
if (node instanceof InstructionOutputNode) {
continue;
}
for (Node successor : input.successors(node)) {
for (Edge edge : input.edgesConnecting(node, successor)) {
if (edge instanceof DefaultEdge) {
input.removeEdge(edge);
input.addEdge(node, successor, MultiOutputInfoEdge.create(new MultiOutputInfo().setTag(idGenerator.getId())));
}
}
}
}
RunnerApi.Components.Builder componentsBuilder = RunnerApi.Components.newBuilder();
componentsBuilder.mergeFrom(this.pipeline.getComponents());
// Default to use the Java environment if pipeline doesn't have environment specified.
if (pipeline.getComponents().getEnvironmentsMap().isEmpty()) {
String envId = Environments.JAVA_SDK_HARNESS_ENVIRONMENT.getUrn() + idGenerator.getId();
componentsBuilder.putEnvironments(envId, Environments.JAVA_SDK_HARNESS_ENVIRONMENT);
}
// By default, use GlobalWindow for all languages.
// For java, if there is a IntervalWindowCoder, then use FixedWindow instead.
// TODO: should get real WindowingStategy from pipeline proto.
String globalWindowingStrategyId = "generatedGlobalWindowingStrategy" + idGenerator.getId();
String intervalWindowEncodingWindowingStrategyId = "generatedIntervalWindowEncodingWindowingStrategy" + idGenerator.getId();
SdkComponents sdkComponents = SdkComponents.create(pipeline.getComponents(), null);
try {
registerWindowingStrategy(globalWindowingStrategyId, WindowingStrategy.globalDefault(), componentsBuilder, sdkComponents);
registerWindowingStrategy(intervalWindowEncodingWindowingStrategyId, WindowingStrategy.of(FixedWindows.of(Duration.standardSeconds(1))), componentsBuilder, sdkComponents);
} catch (IOException exc) {
throw new RuntimeException("Could not convert default windowing stratey to proto", exc);
}
Map<Node, String> nodesToPCollections = new HashMap<>();
ImmutableMap.Builder<String, NameContext> ptransformIdToNameContexts = ImmutableMap.builder();
ImmutableMap.Builder<String, Iterable<SideInputInfo>> ptransformIdToSideInputInfos = ImmutableMap.builder();
ImmutableMap.Builder<String, Iterable<PCollectionView<?>>> ptransformIdToPCollectionViews = ImmutableMap.builder();
// A field of ExecutableStage which includes the PCollection goes to worker side.
Set<PCollectionNode> executableStageOutputs = new HashSet<>();
// A field of ExecutableStage which includes the PCollection goes to runner side.
Set<PCollectionNode> executableStageInputs = new HashSet<>();
for (InstructionOutputNode node : Iterables.filter(input.nodes(), InstructionOutputNode.class)) {
InstructionOutput instructionOutput = node.getInstructionOutput();
String coderId = "generatedCoder" + idGenerator.getId();
String windowingStrategyId;
try (ByteString.Output output = ByteString.newOutput()) {
try {
Coder<?> javaCoder = CloudObjects.coderFromCloudObject(CloudObject.fromSpec(instructionOutput.getCodec()));
Coder<?> elementCoder = ((WindowedValueCoder<?>) javaCoder).getValueCoder();
sdkComponents.registerCoder(elementCoder);
RunnerApi.Coder coderProto = CoderTranslation.toProto(elementCoder, sdkComponents);
componentsBuilder.putCoders(coderId, coderProto);
// For now, Dataflow runner harness only deal with FixedWindow.
if (javaCoder instanceof FullWindowedValueCoder) {
FullWindowedValueCoder<?> windowedValueCoder = (FullWindowedValueCoder<?>) javaCoder;
Coder<?> windowCoder = windowedValueCoder.getWindowCoder();
if (windowCoder instanceof IntervalWindowCoder) {
windowingStrategyId = intervalWindowEncodingWindowingStrategyId;
} else if (windowCoder instanceof GlobalWindow.Coder) {
windowingStrategyId = globalWindowingStrategyId;
} else {
throw new UnsupportedOperationException(String.format("Dataflow portable runner harness doesn't support windowing with %s", windowCoder));
}
} else {
throw new UnsupportedOperationException("Dataflow portable runner harness only supports FullWindowedValueCoder");
}
} catch (IOException e) {
throw new IllegalArgumentException(String.format("Unable to encode coder %s for output %s", instructionOutput.getCodec(), instructionOutput), e);
} catch (Exception e) {
// Coder probably wasn't a java coder
OBJECT_MAPPER.writeValue(output, instructionOutput.getCodec());
componentsBuilder.putCoders(coderId, RunnerApi.Coder.newBuilder().setSpec(RunnerApi.FunctionSpec.newBuilder().setPayload(output.toByteString())).build());
// For non-java coder, hope it's GlobalWindows by default.
// TODO(BEAM-6231): Actually discover the right windowing strategy.
windowingStrategyId = globalWindowingStrategyId;
}
} catch (IOException e) {
throw new IllegalArgumentException(String.format("Unable to encode coder %s for output %s", instructionOutput.getCodec(), instructionOutput), e);
}
// TODO(BEAM-6275): Set correct IsBounded on generated PCollections
String pcollectionId = node.getPcollectionId();
RunnerApi.PCollection pCollection = RunnerApi.PCollection.newBuilder().setCoderId(coderId).setWindowingStrategyId(windowingStrategyId).setIsBounded(RunnerApi.IsBounded.Enum.BOUNDED).build();
nodesToPCollections.put(node, pcollectionId);
componentsBuilder.putPcollections(pcollectionId, pCollection);
// is set
if (isExecutableStageOutputPCollection(input, node)) {
executableStageOutputs.add(PipelineNode.pCollection(pcollectionId, pCollection));
}
if (isExecutableStageInputPCollection(input, node)) {
executableStageInputs.add(PipelineNode.pCollection(pcollectionId, pCollection));
}
}
componentsBuilder.putAllCoders(sdkComponents.toComponents().getCodersMap());
Set<PTransformNode> executableStageTransforms = new HashSet<>();
Set<TimerReference> executableStageTimers = new HashSet<>();
List<UserStateId> userStateIds = new ArrayList<>();
Set<SideInputReference> executableStageSideInputs = new HashSet<>();
for (ParallelInstructionNode node : Iterables.filter(input.nodes(), ParallelInstructionNode.class)) {
ImmutableMap.Builder<String, PCollectionNode> sideInputIds = ImmutableMap.builder();
ParallelInstruction parallelInstruction = node.getParallelInstruction();
String ptransformId = "generatedPtransform" + idGenerator.getId();
ptransformIdToNameContexts.put(ptransformId, NameContext.create(null, parallelInstruction.getOriginalName(), parallelInstruction.getSystemName(), parallelInstruction.getName()));
RunnerApi.PTransform.Builder pTransform = RunnerApi.PTransform.newBuilder();
RunnerApi.FunctionSpec.Builder transformSpec = RunnerApi.FunctionSpec.newBuilder();
List<String> timerIds = new ArrayList<>();
if (parallelInstruction.getParDo() != null) {
ParDoInstruction parDoInstruction = parallelInstruction.getParDo();
CloudObject userFnSpec = CloudObject.fromSpec(parDoInstruction.getUserFn());
String userFnClassName = userFnSpec.getClassName();
if (userFnClassName.equals("CombineValuesFn") || userFnClassName.equals("KeyedCombineFn")) {
transformSpec = transformCombineValuesFnToFunctionSpec(userFnSpec);
ptransformIdToPCollectionViews.put(ptransformId, Collections.emptyList());
} else {
String parDoPTransformId = getString(userFnSpec, PropertyNames.SERIALIZED_FN);
RunnerApi.PTransform parDoPTransform = pipeline.getComponents().getTransformsOrDefault(parDoPTransformId, null);
// TODO: only the non-null branch should exist; for migration ease only
if (parDoPTransform != null) {
checkArgument(parDoPTransform.getSpec().getUrn().equals(PTransformTranslation.PAR_DO_TRANSFORM_URN), "Found transform \"%s\" for ParallelDo instruction, " + " but that transform had unexpected URN \"%s\" (expected \"%s\")", parDoPTransformId, parDoPTransform.getSpec().getUrn(), PTransformTranslation.PAR_DO_TRANSFORM_URN);
RunnerApi.ParDoPayload parDoPayload;
try {
parDoPayload = RunnerApi.ParDoPayload.parseFrom(parDoPTransform.getSpec().getPayload());
} catch (InvalidProtocolBufferException exc) {
throw new RuntimeException("ParDo did not have a ParDoPayload", exc);
}
// user timers and user state.
for (Map.Entry<String, RunnerApi.TimerFamilySpec> entry : parDoPayload.getTimerFamilySpecsMap().entrySet()) {
timerIds.add(entry.getKey());
}
for (Map.Entry<String, RunnerApi.StateSpec> entry : parDoPayload.getStateSpecsMap().entrySet()) {
UserStateId.Builder builder = UserStateId.newBuilder();
builder.setTransformId(parDoPTransformId);
builder.setLocalName(entry.getKey());
userStateIds.add(builder.build());
}
// To facilitate the creation of Set executableStageSideInputs.
for (String sideInputTag : parDoPayload.getSideInputsMap().keySet()) {
String sideInputPCollectionId = parDoPTransform.getInputsOrThrow(sideInputTag);
RunnerApi.PCollection sideInputPCollection = pipeline.getComponents().getPcollectionsOrThrow(sideInputPCollectionId);
pTransform.putInputs(sideInputTag, sideInputPCollectionId);
PCollectionNode pCollectionNode = PipelineNode.pCollection(sideInputPCollectionId, sideInputPCollection);
sideInputIds.put(sideInputTag, pCollectionNode);
}
// To facilitate the creation of Map(ptransformId -> pCollectionView), which is
// required by constructing an ExecutableStageNode.
ImmutableList.Builder<PCollectionView<?>> pcollectionViews = ImmutableList.builder();
for (Map.Entry<String, RunnerApi.SideInput> sideInputEntry : parDoPayload.getSideInputsMap().entrySet()) {
pcollectionViews.add(RegisterNodeFunction.transformSideInputForRunner(pipeline, parDoPTransform, sideInputEntry.getKey(), sideInputEntry.getValue()));
}
ptransformIdToPCollectionViews.put(ptransformId, pcollectionViews.build());
transformSpec.setUrn(PTransformTranslation.PAR_DO_TRANSFORM_URN).setPayload(parDoPayload.toByteString());
} else {
// legacy path - bytes are the FunctionSpec's payload field, basically, and
// SDKs expect it in the PTransform's payload field
byte[] userFnBytes = getBytes(userFnSpec, PropertyNames.SERIALIZED_FN);
transformSpec.setUrn(ParDoTranslation.CUSTOM_JAVA_DO_FN_URN).setPayload(ByteString.copyFrom(userFnBytes));
}
if (parDoInstruction.getSideInputs() != null) {
ptransformIdToSideInputInfos.put(ptransformId, forSideInputInfos(parDoInstruction.getSideInputs(), true));
}
}
} else if (parallelInstruction.getRead() != null) {
ReadInstruction readInstruction = parallelInstruction.getRead();
CloudObject sourceSpec = CloudObject.fromSpec(CloudSourceUtils.flattenBaseSpecs(readInstruction.getSource()).getSpec());
// TODO: Need to plumb through the SDK specific function spec.
transformSpec.setUrn(JAVA_SOURCE_URN);
try {
byte[] serializedSource = Base64.getDecoder().decode(getString(sourceSpec, SERIALIZED_SOURCE));
ByteString sourceByteString = ByteString.copyFrom(serializedSource);
transformSpec.setPayload(sourceByteString);
} catch (Exception e) {
throw new IllegalArgumentException(String.format("Unable to process Read %s", parallelInstruction), e);
}
} else if (parallelInstruction.getFlatten() != null) {
transformSpec.setUrn(PTransformTranslation.FLATTEN_TRANSFORM_URN);
} else {
throw new IllegalArgumentException(String.format("Unknown type of ParallelInstruction %s", parallelInstruction));
}
// predecessor in a ParDo. This PCollection is called the "main input".
for (Node predecessorOutput : input.predecessors(node)) {
pTransform.putInputs("generatedInput" + idGenerator.getId(), nodesToPCollections.get(predecessorOutput));
}
for (Edge edge : input.outEdges(node)) {
Node nodeOutput = input.incidentNodes(edge).target();
MultiOutputInfoEdge edge2 = (MultiOutputInfoEdge) edge;
pTransform.putOutputs(edge2.getMultiOutputInfo().getTag(), nodesToPCollections.get(nodeOutput));
}
pTransform.setSpec(transformSpec);
PTransformNode pTransformNode = PipelineNode.pTransform(ptransformId, pTransform.build());
executableStageTransforms.add(pTransformNode);
for (String timerId : timerIds) {
executableStageTimers.add(TimerReference.of(pTransformNode, timerId));
}
ImmutableMap<String, PCollectionNode> sideInputIdToPCollectionNodes = sideInputIds.build();
for (String sideInputTag : sideInputIdToPCollectionNodes.keySet()) {
SideInputReference sideInputReference = SideInputReference.of(pTransformNode, sideInputTag, sideInputIdToPCollectionNodes.get(sideInputTag));
executableStageSideInputs.add(sideInputReference);
}
executableStageTransforms.add(pTransformNode);
}
if (executableStageInputs.size() != 1) {
throw new UnsupportedOperationException("ExecutableStage only support one input PCollection");
}
PCollectionNode executableInput = executableStageInputs.iterator().next();
RunnerApi.Components executableStageComponents = componentsBuilder.build();
// Get Environment from ptransform, otherwise, use JAVA_SDK_HARNESS_ENVIRONMENT as default.
Environment executableStageEnv = getEnvironmentFromPTransform(executableStageComponents, executableStageTransforms);
if (executableStageEnv == null) {
executableStageEnv = Environments.JAVA_SDK_HARNESS_ENVIRONMENT;
}
Set<UserStateReference> executableStageUserStateReference = new HashSet<>();
for (UserStateId userStateId : userStateIds) {
executableStageUserStateReference.add(UserStateReference.fromUserStateId(userStateId, executableStageComponents));
}
ExecutableStage executableStage = ImmutableExecutableStage.ofFullComponents(executableStageComponents, executableStageEnv, executableInput, executableStageSideInputs, executableStageUserStateReference, executableStageTimers, executableStageTransforms, executableStageOutputs, DEFAULT_WIRE_CODER_SETTINGS);
return ExecutableStageNode.create(executableStage, ptransformIdToNameContexts.build(), ptransformIdToSideInputInfos.build(), ptransformIdToPCollectionViews.build());
}
use of org.apache.beam.runners.core.construction.graph.PipelineNode.PCollectionNode in project beam by apache.
the class GreedyStageFuserTest method userStateIncludedInStage.
@Test
public void userStateIncludedInStage() {
Environment env = Environments.createDockerEnvironment("common");
PTransform readTransform = PTransform.newBuilder().putInputs("input", "impulse.out").putOutputs("output", "read.out").setSpec(FunctionSpec.newBuilder().setUrn(PTransformTranslation.PAR_DO_TRANSFORM_URN).setPayload(ParDoPayload.newBuilder().setDoFn(FunctionSpec.newBuilder()).build().toByteString())).setEnvironmentId("common").build();
PTransform parDoTransform = PTransform.newBuilder().putInputs("input", "read.out").putOutputs("output", "parDo.out").setSpec(FunctionSpec.newBuilder().setUrn(PTransformTranslation.PAR_DO_TRANSFORM_URN).setPayload(ParDoPayload.newBuilder().setDoFn(FunctionSpec.newBuilder()).putStateSpecs("state_spec", StateSpec.getDefaultInstance()).build().toByteString())).setEnvironmentId("common").build();
PCollection userStateMainInputPCollection = PCollection.newBuilder().setUniqueName("read.out").build();
QueryablePipeline p = QueryablePipeline.forPrimitivesIn(partialComponents.toBuilder().putTransforms("read", readTransform).putPcollections("read.out", userStateMainInputPCollection).putTransforms("user_state", PTransform.newBuilder().putInputs("input", "impulse.out").putOutputs("output", "user_state.out").build()).putPcollections("user_state.out", PCollection.newBuilder().setUniqueName("user_state.out").build()).putTransforms("parDo", parDoTransform).putPcollections("parDo.out", PCollection.newBuilder().setUniqueName("parDo.out").build()).putEnvironments("common", env).build());
PCollectionNode readOutput = getOnlyElement(p.getOutputPCollections(PipelineNode.pTransform("read", readTransform)));
ExecutableStage subgraph = GreedyStageFuser.forGrpcPortRead(p, readOutput, ImmutableSet.of(PipelineNode.pTransform("parDo", parDoTransform)));
PTransformNode parDoNode = PipelineNode.pTransform("parDo", parDoTransform);
UserStateReference userStateRef = UserStateReference.of(parDoNode, "state_spec", PipelineNode.pCollection("read.out", userStateMainInputPCollection));
assertThat(subgraph.getUserStates(), contains(userStateRef));
assertThat(subgraph.getOutputPCollections(), emptyIterable());
}
use of org.apache.beam.runners.core.construction.graph.PipelineNode.PCollectionNode in project beam by apache.
the class GreedyStageFuserTest method materializesWithDifferentEnvSibling.
@Test
public void materializesWithDifferentEnvSibling() {
// (impulse.out) -> read -> read.out -> parDo -> parDo.out
// \
// -> window -> window.out
// Fuses into
// (impulse.out) -> read -> (read.out)
// (read.out) -> parDo -> parDo.out
// (read.out) -> window -> window.out
// The window can't be fused into the stage, which forces the PCollection to be materialized.
// ParDo in this case _could_ be fused into the stage, but is not for simplicity of
// implementation
Environment env = Environments.createDockerEnvironment("common");
PTransform readTransform = PTransform.newBuilder().putInputs("input", "impulse.out").putOutputs("output", "read.out").setSpec(FunctionSpec.newBuilder().setUrn(PTransformTranslation.PAR_DO_TRANSFORM_URN).setPayload(ParDoPayload.newBuilder().setDoFn(FunctionSpec.newBuilder()).build().toByteString())).setEnvironmentId("common").build();
QueryablePipeline p = QueryablePipeline.forPrimitivesIn(partialComponents.toBuilder().putTransforms("read", readTransform).putPcollections("read.out", PCollection.newBuilder().setUniqueName("read.out").build()).putTransforms("parDo", PTransform.newBuilder().putInputs("input", "read.out").putOutputs("output", "parDo.out").setSpec(FunctionSpec.newBuilder().setUrn(PTransformTranslation.PAR_DO_TRANSFORM_URN).setPayload(ParDoPayload.newBuilder().setDoFn(FunctionSpec.newBuilder()).build().toByteString())).setEnvironmentId("common").build()).putPcollections("parDo.out", PCollection.newBuilder().setUniqueName("parDo.out").build()).putTransforms("window", PTransform.newBuilder().putInputs("input", "read.out").putOutputs("output", "window.out").setSpec(FunctionSpec.newBuilder().setUrn(PTransformTranslation.ASSIGN_WINDOWS_TRANSFORM_URN).setPayload(WindowIntoPayload.newBuilder().setWindowFn(FunctionSpec.newBuilder()).build().toByteString())).setEnvironmentId("rare").build()).putPcollections("window.out", PCollection.newBuilder().setUniqueName("window.out").build()).putEnvironments("rare", Environments.createDockerEnvironment("rare")).putEnvironments("common", env).build());
PTransformNode readNode = PipelineNode.pTransform("read", readTransform);
PCollectionNode readOutput = getOnlyElement(p.getOutputPCollections(readNode));
ExecutableStage subgraph = GreedyStageFuser.forGrpcPortRead(p, impulseOutputNode, ImmutableSet.of(PipelineNode.pTransform("read", readTransform)));
assertThat(subgraph.getOutputPCollections(), contains(readOutput));
assertThat(subgraph.getTransforms(), contains(readNode));
}
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