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Example 11 with FileObject

use of org.apache.commons.vfs2.FileObject in project scheduling by ow2-proactive.

the class SchedulerStateRest method pushFile.

/**
 * Pushes a file from the local file system into the given DataSpace
 *
 * @param sessionId
 *            a valid session id
 * @param spaceName
 *            the name of the DataSpace
 * @param filePath
 *            the path inside the DataSpace where to put the file e.g.
 *            "/myfolder"
 * @param multipart
 *            the form data containing : - fileName the name of the file
 *            that will be created on the DataSpace - fileContent the
 *            content of the file
 * @return true if the transfer succeeded
 * @see org.ow2.proactive.scheduler.common.SchedulerConstants for spaces
 *      names
 */
@Override
public boolean pushFile(@HeaderParam("sessionid") String sessionId, @PathParam("spaceName") String spaceName, @PathParam("filePath") String filePath, MultipartFormDataInput multipart) throws IOException, NotConnectedRestException, PermissionRestException {
    checkAccess(sessionId, "pushFile");
    Session session = dataspaceRestApi.checkSessionValidity(sessionId);
    Map<String, List<InputPart>> formDataMap = multipart.getFormDataMap();
    List<InputPart> fNL = formDataMap.get("fileName");
    if ((fNL == null) || (fNL.size() == 0)) {
        throw new IllegalArgumentException("Illegal multipart argument definition (fileName), received " + fNL);
    }
    String fileName = fNL.get(0).getBody(String.class, null);
    List<InputPart> fCL = formDataMap.get("fileContent");
    if ((fCL == null) || (fCL.size() == 0)) {
        throw new IllegalArgumentException("Illegal multipart argument definition (fileContent), received " + fCL);
    }
    InputStream fileContent = fCL.get(0).getBody(InputStream.class, null);
    if (fileName == null) {
        throw new IllegalArgumentException("Wrong file name : " + fileName);
    }
    filePath = normalizeFilePath(filePath, fileName);
    FileObject destfo = dataspaceRestApi.resolveFile(session, spaceName, filePath);
    URL targetUrl = destfo.getURL();
    logger.info("[pushFile] pushing file to " + targetUrl);
    if (!destfo.isWriteable()) {
        RuntimeException ex = new IllegalArgumentException("File " + filePath + " is not writable in space " + spaceName);
        logger.error(ex);
        throw ex;
    }
    if (destfo.exists()) {
        destfo.delete();
    }
    // used to create the necessary directories if needed
    destfo.createFile();
    dataspaceRestApi.writeFile(fileContent, destfo, null);
    return true;
}
Also used : InputPart(org.jboss.resteasy.plugins.providers.multipart.InputPart) BufferedInputStream(java.io.BufferedInputStream) SequenceInputStream(java.io.SequenceInputStream) FileInputStream(java.io.FileInputStream) InputStream(java.io.InputStream) ArrayList(java.util.ArrayList) List(java.util.List) FileObject(org.apache.commons.vfs2.FileObject) URL(java.net.URL) HttpSession(javax.servlet.http.HttpSession) Session(org.ow2.proactive_grid_cloud_portal.common.Session)

Example 12 with FileObject

use of org.apache.commons.vfs2.FileObject in project scheduling by ow2-proactive.

the class SchedulerStateRest method deleteFile.

/**
 * Deletes a file or recursively delete a directory from the given DataSpace
 *
 * @param sessionId
 *            a valid session id
 * @param spaceName
 *            the name of the data space involved (GLOBAL or USER)
 * @param filePath
 *            the path to the file or directory which must be deleted
 */
@Override
public boolean deleteFile(@HeaderParam("sessionid") String sessionId, @PathParam("spaceName") String spaceName, @PathParam("filePath") String filePath) throws IOException, NotConnectedRestException, PermissionRestException {
    checkAccess(sessionId, "deleteFile");
    Session session = dataspaceRestApi.checkSessionValidity(sessionId);
    filePath = normalizeFilePath(filePath, null);
    FileObject sourcefo = dataspaceRestApi.resolveFile(session, spaceName, filePath);
    if (!sourcefo.exists() || !sourcefo.isWriteable()) {
        RuntimeException ex = new IllegalArgumentException("File or Folder " + filePath + " does not exist or is not writable in space " + spaceName);
        logger.error(ex);
        throw ex;
    }
    if (sourcefo.getType().equals(FileType.FILE)) {
        logger.info("[deleteFile] deleting file " + sourcefo.getURL());
        sourcefo.delete();
    } else if (sourcefo.getType().equals(FileType.FOLDER)) {
        logger.info("[deleteFile] deleting folder (and all its descendants) " + sourcefo.getURL());
        sourcefo.delete(Selectors.SELECT_ALL);
    } else {
        RuntimeException ex = new IllegalArgumentException("File " + filePath + " has an unsupported type " + sourcefo.getType());
        logger.error(ex);
        throw ex;
    }
    return true;
}
Also used : FileObject(org.apache.commons.vfs2.FileObject) HttpSession(javax.servlet.http.HttpSession) Session(org.ow2.proactive_grid_cloud_portal.common.Session)

Example 13 with FileObject

use of org.apache.commons.vfs2.FileObject in project scheduling by ow2-proactive.

the class RestDataspaceImpl method delete.

/**
 * Delete file(s) from the specified location in the <i>dataspace</i>. The
 * format of the DELETE URI is:
 * <p>
 * {@code http://<rest-server-path>/data/<dataspace>/<path-name>}
 * <p>
 * Example:
 * {@code http://localhost:8080/rest/rest/data/user/my-files/my-text-file.txt}
 * <ul>
 * <li>dataspace: can have two possible values, 'user' or 'global',
 * depending on the target <i>DATASPACE</i></li>
 * <li>path-name: location of the file(s) to be deleted.</li>
 * </ul>
 * <b>Notes:</b>
 * <ul>
 * <li>Only empty directories can be deleted.</li>
 * <li>File names or regular expressions can be used as 'includes' and
 * 'excludes' query parameters, in order to select which files to be deleted
 * inside the specified directory (path-name).</li>
 * </ul>
 */
@DELETE
@Path("/{dataspace}/{path-name:.*}")
public Response delete(@HeaderParam("sessionid") String sessionId, @PathParam("dataspace") String dataspace, @PathParam("path-name") String pathname, @QueryParam("includes") List<String> includes, @QueryParam("excludes") List<String> excludes) throws NotConnectedRestException, PermissionRestException {
    Session session = checkSessionValidity(sessionId);
    try {
        checkPathParams(dataspace, pathname);
        FileObject fo = resolveFile(session, dataspace, pathname);
        if (!fo.exists()) {
            return Response.status(Response.Status.NO_CONTENT).build();
        }
        if (fo.getType() == FileType.FOLDER) {
            logger.debug(String.format("Deleting directory %s in %s", pathname, dataspace));
            return deleteDir(fo, includes, excludes);
        } else {
            logger.debug(String.format("Deleting file %s in %s", pathname, dataspace));
            fo.close();
            return fo.delete() ? noContentRes() : serverErrorRes("Cannot delete the file: %s", pathname);
        }
    } catch (Throwable error) {
        logger.error(String.format("Cannot delete %s in %s.", pathname, dataspace), error);
        throw rethrow(error);
    }
}
Also used : FileObject(org.apache.commons.vfs2.FileObject) Session(org.ow2.proactive_grid_cloud_portal.common.Session)

Example 14 with FileObject

use of org.apache.commons.vfs2.FileObject in project scheduling by ow2-proactive.

the class RestDataspaceImpl method retrieve.

/**
 * Retrieves single or multiple files from specified location of the server.
 * The format of the GET URI is:
 * <P>
 * {@code http://<rest-server-path>/data/<dataspace>/<path-name>}
 * <p>
 * Example:
 * <p>
 * {@code http://localhost:8080/rest/rest/data/user/my-files/my-text-file.txt}
 * <ul>
 * <li>dataspace: can have two possible values, 'user' or 'global',
 * depending on the target <i>DATASPACE</i></li>
 * <li>path-name: location from which the file will be retrieved.</li>
 * </ul>
 * <b>Notes:</b>
 * <ul>
 * <li>If 'list' is specified as the 'comp' query parameter, an
 * {@link ListFile} type object will be return in JSON format. It will contain a list of files and folder contained in the selected
 * path.
 * </li>
 * <li>If 'recursive' is specified as the 'comp' query parameter, an
 * {@link ListFile} type object will be return in JSON format. It will contain a list of files and folder contained in the selected
 * path and all subfolders.
 * </li>
 * <li>If the pathname represents a file its contents will be returned as:
 * <ul>
 * <li>an octet stream, if its a compressed file or the client doesn't
 * accept encoded content</li>
 * <li>a 'gzip' encoded stream, if the client accepts 'gzip' encoded content
 * </li>
 * <li>a 'zip' encoded stream, if the client accepts 'zip' encoded contents</li>
 * </ul>
 * </li>
 * <li>If the pathname represents a directory, its contents will be returned
 * as 'zip' encoded stream.</li>
 * <li>file names or regular expressions can be used as 'includes' and
 * 'excludes' query parameters, in order to select which files to be
 * returned can be used to select the files returned.</li>
 * </ul>
 */
@GET
@Path("/{dataspace}/{path-name:.*}")
public Response retrieve(@HeaderParam("sessionid") String sessionId, @HeaderParam("Accept-Encoding") String encoding, @PathParam("dataspace") String dataspace, @PathParam("path-name") String pathname, @QueryParam("comp") String component, @QueryParam("includes") List<String> includes, @QueryParam("excludes") List<String> excludes) throws NotConnectedRestException, PermissionRestException {
    Session session = checkSessionValidity(sessionId);
    try {
        checkPathParams(dataspace, pathname);
        FileObject fo = resolveFile(session, dataspace, pathname);
        if (!fo.exists()) {
            return notFoundRes();
        }
        if (!Strings.isNullOrEmpty(component)) {
            return componentResponse(component, fo, includes, excludes);
        }
        if (fo.getType() == FileType.FILE) {
            if (VFSZipper.isZipFile(fo)) {
                logger.debug(String.format("Retrieving file %s in %s", pathname, dataspace));
                return fileComponentResponse(fo);
            } else if (Strings.isNullOrEmpty(encoding) || encoding.contains("*") || encoding.contains("gzip")) {
                logger.debug(String.format("Retrieving file %s as gzip in %s", pathname, dataspace));
                return gzipComponentResponse(pathname, fo);
            } else if (encoding.contains("zip")) {
                logger.debug(String.format("Retrieving file %s as zip in %s", pathname, dataspace));
                return zipComponentResponse(fo, null, null);
            } else {
                logger.debug(String.format("Retrieving file %s in %s", pathname, dataspace));
                return fileComponentResponse(fo);
            }
        } else {
            // folder
            if (Strings.isNullOrEmpty(encoding) || encoding.contains("*") || encoding.contains("zip")) {
                logger.debug(String.format("Retrieving folder %s as zip in %s", pathname, dataspace));
                return zipComponentResponse(fo, includes, excludes);
            } else {
                return badRequestRes("Folder retrieval only supported with zip encoding.");
            }
        }
    } catch (Throwable error) {
        logger.error(String.format("Cannot retrieve %s in %s.", pathname, dataspace), error);
        throw rethrow(error);
    }
}
Also used : FileObject(org.apache.commons.vfs2.FileObject) Session(org.ow2.proactive_grid_cloud_portal.common.Session)

Example 15 with FileObject

use of org.apache.commons.vfs2.FileObject in project scheduling by ow2-proactive.

the class TestGlobalSpace method testGlobalSpace.

@Test
public void testGlobalSpace() throws Throwable {
    File in = tmpFolder.newFolder("input_space");
    String inPath = in.getAbsolutePath();
    File out = tmpFolder.newFolder("output_space");
    String outPath = out.getAbsolutePath();
    writeFiles(inFiles, inPath);
    TaskFlowJob job = new TaskFlowJob();
    job.setName(this.getClass().getSimpleName());
    job.setInputSpace(in.toURI().toURL().toString());
    job.setOutputSpace(out.toURI().toURL().toString());
    JavaTask A = new JavaTask();
    A.setExecutableClassName("org.ow2.proactive.scheduler.examples.EmptyTask");
    A.setName("A");
    for (String[] file : inFiles) {
        A.addInputFiles(file[0], InputAccessMode.TransferFromInputSpace);
        A.addOutputFiles(file[0] + ".glob.A", OutputAccessMode.TransferToGlobalSpace);
    }
    A.setPreScript(new SimpleScript(scriptA, "groovy"));
    A.setForkEnvironment(new ForkEnvironment());
    job.addTask(A);
    JavaTask B = new JavaTask();
    B.setExecutableClassName("org.ow2.proactive.scheduler.examples.EmptyTask");
    B.setName("B");
    B.addDependence(A);
    for (String[] file : inFiles) {
        B.addInputFiles(file[0] + ".glob.A", InputAccessMode.TransferFromGlobalSpace);
        B.addOutputFiles(file[0] + ".out", OutputAccessMode.TransferToOutputSpace);
    }
    B.setPreScript(new SimpleScript(scriptB, "groovy"));
    B.setForkEnvironment(new ForkEnvironment());
    job.addTask(B);
    Scheduler scheduler = schedulerHelper.getSchedulerInterface();
    JobId id = scheduler.submit(job);
    schedulerHelper.waitForEventJobFinished(id);
    assertFalse(schedulerHelper.getJobResult(id).hadException());
    /**
     * check: inFiles > IN > LOCAL A > GLOBAL > LOCAL B > OUT
     */
    for (String[] inFile : inFiles) {
        File f = new File(outPath + File.separator + inFile[0] + ".out");
        assertTrue("File does not exist: " + f.getAbsolutePath(), f.exists());
        Assert.assertEquals("Original and copied files differ", inFile[1], FileUtils.readFileToString(f));
        f.delete();
        File inf = new File(inPath + File.separator + inFile[0]);
        inf.delete();
    }
    /**
     * check that the file produced is accessible in the global user space via the scheduler API
     */
    String globalURI = scheduler.getGlobalSpaceURIs().get(0);
    assertTrue(globalURI.startsWith("file:"));
    String globalPath = new File(new URI(globalURI)).getAbsolutePath();
    FileSystemManager fsManager = VFSFactory.createDefaultFileSystemManager();
    for (String[] file : inFiles) {
        FileObject outFile = fsManager.resolveFile(globalURI + "/" + file[0] + ".glob.A");
        log("Checking existence of " + outFile.getURL());
        assertTrue(outFile.getURL() + " exists", outFile.exists());
        File outFile2 = new File(globalPath, file[0] + ".glob.A");
        log("Checking existence of " + outFile2);
        assertTrue(outFile2 + " exists", outFile2.exists());
    }
}
Also used : Scheduler(org.ow2.proactive.scheduler.common.Scheduler) TaskFlowJob(org.ow2.proactive.scheduler.common.job.TaskFlowJob) SimpleScript(org.ow2.proactive.scripting.SimpleScript) JavaTask(org.ow2.proactive.scheduler.common.task.JavaTask) FileObject(org.apache.commons.vfs2.FileObject) ForkEnvironment(org.ow2.proactive.scheduler.common.task.ForkEnvironment) URI(java.net.URI) FileSystemManager(org.apache.commons.vfs2.FileSystemManager) JobId(org.ow2.proactive.scheduler.common.job.JobId) Test(org.junit.Test)

Aggregations

FileObject (org.apache.commons.vfs2.FileObject)39 FileSystemException (org.apache.commons.vfs2.FileSystemException)14 IOException (java.io.IOException)8 DataStoreException (org.apache.jackrabbit.core.data.DataStoreException)8 Session (org.ow2.proactive_grid_cloud_portal.common.Session)7 ArrayList (java.util.ArrayList)4 InputStream (java.io.InputStream)3 URI (java.net.URI)3 HttpSession (javax.servlet.http.HttpSession)3 FileSystemManager (org.apache.commons.vfs2.FileSystemManager)3 FileType (org.apache.commons.vfs2.FileType)3 TaskFlowJob (org.ow2.proactive.scheduler.common.job.TaskFlowJob)3 Gson (com.google.gson.Gson)2 GsonBuilder (com.google.gson.GsonBuilder)2 FileInputStream (java.io.FileInputStream)2 OutputStream (java.io.OutputStream)2 URISyntaxException (java.net.URISyntaxException)2 LinkedList (java.util.LinkedList)2 ExecutionException (java.util.concurrent.ExecutionException)2 FileSelector (org.apache.commons.vfs2.FileSelector)2