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Example 6 with DeleteOrphanFiles

use of org.apache.iceberg.actions.DeleteOrphanFiles in project iceberg by apache.

the class TestRemoveOrphanFilesAction method testRemoveOrphanFilesWithHadoopCatalog.

@Test
public void testRemoveOrphanFilesWithHadoopCatalog() throws InterruptedException {
    HadoopCatalog catalog = new HadoopCatalog(new Configuration(), tableLocation);
    String namespaceName = "testDb";
    String tableName = "testTb";
    Namespace namespace = Namespace.of(namespaceName);
    TableIdentifier tableIdentifier = TableIdentifier.of(namespace, tableName);
    Table table = catalog.createTable(tableIdentifier, SCHEMA, PartitionSpec.unpartitioned(), Maps.newHashMap());
    List<ThreeColumnRecord> records = Lists.newArrayList(new ThreeColumnRecord(1, "AAAAAAAAAA", "AAAA"));
    Dataset<Row> df = spark.createDataFrame(records, ThreeColumnRecord.class).coalesce(1);
    df.select("c1", "c2", "c3").write().format("iceberg").mode("append").save(table.location());
    df.write().mode("append").parquet(table.location() + "/data");
    // sleep for 1 second to unsure files will be old enough
    Thread.sleep(1000);
    table.refresh();
    DeleteOrphanFiles.Result result = SparkActions.get().deleteOrphanFiles(table).olderThan(System.currentTimeMillis()).execute();
    Assert.assertEquals("Should delete only 1 files", 1, Iterables.size(result.orphanFileLocations()));
    Dataset<Row> resultDF = spark.read().format("iceberg").load(table.location());
    List<ThreeColumnRecord> actualRecords = resultDF.as(Encoders.bean(ThreeColumnRecord.class)).collectAsList();
    Assert.assertEquals("Rows must match", records, actualRecords);
}
Also used : TableIdentifier(org.apache.iceberg.catalog.TableIdentifier) Table(org.apache.iceberg.Table) Configuration(org.apache.hadoop.conf.Configuration) DeleteOrphanFiles(org.apache.iceberg.actions.DeleteOrphanFiles) HadoopCatalog(org.apache.iceberg.hadoop.HadoopCatalog) Row(org.apache.spark.sql.Row) ThreeColumnRecord(org.apache.iceberg.spark.source.ThreeColumnRecord) Namespace(org.apache.iceberg.catalog.Namespace) Test(org.junit.Test)

Example 7 with DeleteOrphanFiles

use of org.apache.iceberg.actions.DeleteOrphanFiles in project iceberg by apache.

the class TestRemoveOrphanFilesAction method testHiveCatalogTable.

@Test
public void testHiveCatalogTable() throws IOException {
    Table table = catalog.createTable(TableIdentifier.of("default", "hivetestorphan"), SCHEMA, SPEC, tableLocation, Maps.newHashMap());
    List<ThreeColumnRecord> records = Lists.newArrayList(new ThreeColumnRecord(1, "AAAAAAAAAA", "AAAA"));
    Dataset<Row> df = spark.createDataFrame(records, ThreeColumnRecord.class).coalesce(1);
    df.select("c1", "c2", "c3").write().format("iceberg").mode("append").save("default.hivetestorphan");
    String location = table.location().replaceFirst("file:", "");
    new File(location + "/data/trashfile").createNewFile();
    DeleteOrphanFiles.Result result = SparkActions.get().deleteOrphanFiles(table).olderThan(System.currentTimeMillis() + 1000).execute();
    Assert.assertTrue("trash file should be removed", StreamSupport.stream(result.orphanFileLocations().spliterator(), false).anyMatch(file -> file.contains("file:" + location + "data/trashfile")));
}
Also used : Arrays(java.util.Arrays) Types(org.apache.iceberg.types.Types) Dataset(org.apache.spark.sql.Dataset) FileSystem(org.apache.hadoop.fs.FileSystem) NestedField.optional(org.apache.iceberg.types.Types.NestedField.optional) DeleteOrphanFiles(org.apache.iceberg.actions.DeleteOrphanFiles) FileStatus(org.apache.hadoop.fs.FileStatus) Lists(org.apache.iceberg.relocated.com.google.common.collect.Lists) AtomicInteger(java.util.concurrent.atomic.AtomicInteger) Map(java.util.Map) Configuration(org.apache.hadoop.conf.Configuration) Path(org.apache.hadoop.fs.Path) StreamSupport(java.util.stream.StreamSupport) Namespace(org.apache.iceberg.catalog.Namespace) ExecutorService(java.util.concurrent.ExecutorService) ThreeColumnRecord(org.apache.iceberg.spark.source.ThreeColumnRecord) Before(org.junit.Before) AssertHelpers(org.apache.iceberg.AssertHelpers) TableIdentifier(org.apache.iceberg.catalog.TableIdentifier) HadoopCatalog(org.apache.iceberg.hadoop.HadoopCatalog) Table(org.apache.iceberg.Table) HiddenPathFilter(org.apache.iceberg.hadoop.HiddenPathFilter) HadoopTables(org.apache.iceberg.hadoop.HadoopTables) ConcurrentHashMap(java.util.concurrent.ConcurrentHashMap) Maps(org.apache.iceberg.relocated.com.google.common.collect.Maps) Set(java.util.Set) IOException(java.io.IOException) Iterables(org.apache.iceberg.relocated.com.google.common.collect.Iterables) Test(org.junit.Test) Row(org.apache.spark.sql.Row) Schema(org.apache.iceberg.Schema) Collectors(java.util.stream.Collectors) File(java.io.File) Executors(java.util.concurrent.Executors) Encoders(org.apache.spark.sql.Encoders) ValidationException(org.apache.iceberg.exceptions.ValidationException) Sets(org.apache.iceberg.relocated.com.google.common.collect.Sets) List(java.util.List) Rule(org.junit.Rule) PartitionSpec(org.apache.iceberg.PartitionSpec) TableProperties(org.apache.iceberg.TableProperties) Assert(org.junit.Assert) SparkTestBase(org.apache.iceberg.spark.SparkTestBase) TemporaryFolder(org.junit.rules.TemporaryFolder) Snapshot(org.apache.iceberg.Snapshot) Table(org.apache.iceberg.Table) DeleteOrphanFiles(org.apache.iceberg.actions.DeleteOrphanFiles) Row(org.apache.spark.sql.Row) ThreeColumnRecord(org.apache.iceberg.spark.source.ThreeColumnRecord) File(java.io.File) Test(org.junit.Test)

Example 8 with DeleteOrphanFiles

use of org.apache.iceberg.actions.DeleteOrphanFiles in project iceberg by apache.

the class TestRemoveOrphanFilesAction3 method testSparkCatalogNamedHadoopTable.

@Test
public void testSparkCatalogNamedHadoopTable() throws Exception {
    spark.conf().set("spark.sql.catalog.hadoop", "org.apache.iceberg.spark.SparkCatalog");
    spark.conf().set("spark.sql.catalog.hadoop.type", "hadoop");
    spark.conf().set("spark.sql.catalog.hadoop.warehouse", tableLocation);
    SparkCatalog cat = (SparkCatalog) spark.sessionState().catalogManager().catalog("hadoop");
    String[] database = { "default" };
    Identifier id = Identifier.of(database, "table");
    Map<String, String> options = Maps.newHashMap();
    Transform[] transforms = {};
    cat.createTable(id, SparkSchemaUtil.convert(SCHEMA), transforms, options);
    SparkTable table = cat.loadTable(id);
    spark.sql("INSERT INTO hadoop.default.table VALUES (1,1,1)");
    String location = table.table().location().replaceFirst("file:", "");
    new File(location + "/data/trashfile").createNewFile();
    DeleteOrphanFiles.Result results = SparkActions.get().deleteOrphanFiles(table.table()).olderThan(System.currentTimeMillis() + 1000).execute();
    Assert.assertTrue("trash file should be removed", StreamSupport.stream(results.orphanFileLocations().spliterator(), false).anyMatch(file -> file.contains("file:" + location + "/data/trashfile")));
}
Also used : SparkCatalog(org.apache.iceberg.spark.SparkCatalog) Maps(org.apache.iceberg.relocated.com.google.common.collect.Maps) Test(org.junit.Test) DeleteOrphanFiles(org.apache.iceberg.actions.DeleteOrphanFiles) SparkSchemaUtil(org.apache.iceberg.spark.SparkSchemaUtil) File(java.io.File) SparkSessionCatalog(org.apache.iceberg.spark.SparkSessionCatalog) Map(java.util.Map) After(org.junit.After) Transform(org.apache.spark.sql.connector.expressions.Transform) StreamSupport(java.util.stream.StreamSupport) Identifier(org.apache.spark.sql.connector.catalog.Identifier) Assert(org.junit.Assert) SparkTable(org.apache.iceberg.spark.source.SparkTable) Identifier(org.apache.spark.sql.connector.catalog.Identifier) SparkCatalog(org.apache.iceberg.spark.SparkCatalog) DeleteOrphanFiles(org.apache.iceberg.actions.DeleteOrphanFiles) Transform(org.apache.spark.sql.connector.expressions.Transform) SparkTable(org.apache.iceberg.spark.source.SparkTable) File(java.io.File) Test(org.junit.Test)

Example 9 with DeleteOrphanFiles

use of org.apache.iceberg.actions.DeleteOrphanFiles in project iceberg by apache.

the class TestRemoveOrphanFilesAction3 method testSparkCatalogTable.

@Test
public void testSparkCatalogTable() throws Exception {
    spark.conf().set("spark.sql.catalog.mycat", "org.apache.iceberg.spark.SparkCatalog");
    spark.conf().set("spark.sql.catalog.mycat.type", "hadoop");
    spark.conf().set("spark.sql.catalog.mycat.warehouse", tableLocation);
    SparkCatalog cat = (SparkCatalog) spark.sessionState().catalogManager().catalog("mycat");
    String[] database = { "default" };
    Identifier id = Identifier.of(database, "table");
    Map<String, String> options = Maps.newHashMap();
    Transform[] transforms = {};
    cat.createTable(id, SparkSchemaUtil.convert(SCHEMA), transforms, options);
    SparkTable table = cat.loadTable(id);
    spark.sql("INSERT INTO mycat.default.table VALUES (1,1,1)");
    String location = table.table().location().replaceFirst("file:", "");
    new File(location + "/data/trashfile").createNewFile();
    DeleteOrphanFiles.Result results = SparkActions.get().deleteOrphanFiles(table.table()).olderThan(System.currentTimeMillis() + 1000).execute();
    Assert.assertTrue("trash file should be removed", StreamSupport.stream(results.orphanFileLocations().spliterator(), false).anyMatch(file -> file.contains("file:" + location + "/data/trashfile")));
}
Also used : SparkCatalog(org.apache.iceberg.spark.SparkCatalog) Maps(org.apache.iceberg.relocated.com.google.common.collect.Maps) Test(org.junit.Test) DeleteOrphanFiles(org.apache.iceberg.actions.DeleteOrphanFiles) SparkSchemaUtil(org.apache.iceberg.spark.SparkSchemaUtil) File(java.io.File) SparkSessionCatalog(org.apache.iceberg.spark.SparkSessionCatalog) Map(java.util.Map) After(org.junit.After) Transform(org.apache.spark.sql.connector.expressions.Transform) StreamSupport(java.util.stream.StreamSupport) Identifier(org.apache.spark.sql.connector.catalog.Identifier) Assert(org.junit.Assert) SparkTable(org.apache.iceberg.spark.source.SparkTable) Identifier(org.apache.spark.sql.connector.catalog.Identifier) SparkCatalog(org.apache.iceberg.spark.SparkCatalog) DeleteOrphanFiles(org.apache.iceberg.actions.DeleteOrphanFiles) Transform(org.apache.spark.sql.connector.expressions.Transform) SparkTable(org.apache.iceberg.spark.source.SparkTable) File(java.io.File) Test(org.junit.Test)

Example 10 with DeleteOrphanFiles

use of org.apache.iceberg.actions.DeleteOrphanFiles in project iceberg by apache.

the class TestRemoveOrphanFilesAction3 method testSparkSessionCatalogHadoopTable.

@Test
public void testSparkSessionCatalogHadoopTable() throws Exception {
    spark.conf().set("spark.sql.catalog.spark_catalog", "org.apache.iceberg.spark.SparkSessionCatalog");
    spark.conf().set("spark.sql.catalog.spark_catalog.type", "hadoop");
    spark.conf().set("spark.sql.catalog.spark_catalog.warehouse", tableLocation);
    SparkSessionCatalog cat = (SparkSessionCatalog) spark.sessionState().catalogManager().v2SessionCatalog();
    String[] database = { "default" };
    Identifier id = Identifier.of(database, "table");
    Map<String, String> options = Maps.newHashMap();
    Transform[] transforms = {};
    cat.createTable(id, SparkSchemaUtil.convert(SCHEMA), transforms, options);
    SparkTable table = (SparkTable) cat.loadTable(id);
    spark.sql("INSERT INTO default.table VALUES (1,1,1)");
    String location = table.table().location().replaceFirst("file:", "");
    new File(location + "/data/trashfile").createNewFile();
    DeleteOrphanFiles.Result results = SparkActions.get().deleteOrphanFiles(table.table()).olderThan(System.currentTimeMillis() + 1000).execute();
    Assert.assertTrue("trash file should be removed", StreamSupport.stream(results.orphanFileLocations().spliterator(), false).anyMatch(file -> file.contains("file:" + location + "/data/trashfile")));
}
Also used : SparkSessionCatalog(org.apache.iceberg.spark.SparkSessionCatalog) SparkCatalog(org.apache.iceberg.spark.SparkCatalog) Maps(org.apache.iceberg.relocated.com.google.common.collect.Maps) Test(org.junit.Test) DeleteOrphanFiles(org.apache.iceberg.actions.DeleteOrphanFiles) SparkSchemaUtil(org.apache.iceberg.spark.SparkSchemaUtil) File(java.io.File) SparkSessionCatalog(org.apache.iceberg.spark.SparkSessionCatalog) Map(java.util.Map) After(org.junit.After) Transform(org.apache.spark.sql.connector.expressions.Transform) StreamSupport(java.util.stream.StreamSupport) Identifier(org.apache.spark.sql.connector.catalog.Identifier) Assert(org.junit.Assert) SparkTable(org.apache.iceberg.spark.source.SparkTable) Identifier(org.apache.spark.sql.connector.catalog.Identifier) DeleteOrphanFiles(org.apache.iceberg.actions.DeleteOrphanFiles) Transform(org.apache.spark.sql.connector.expressions.Transform) SparkTable(org.apache.iceberg.spark.source.SparkTable) File(java.io.File) Test(org.junit.Test)

Aggregations

DeleteOrphanFiles (org.apache.iceberg.actions.DeleteOrphanFiles)10 Test (org.junit.Test)9 File (java.io.File)8 StreamSupport (java.util.stream.StreamSupport)8 Maps (org.apache.iceberg.relocated.com.google.common.collect.Maps)8 Assert (org.junit.Assert)8 Map (java.util.Map)7 Identifier (org.apache.spark.sql.connector.catalog.Identifier)6 SparkCatalog (org.apache.iceberg.spark.SparkCatalog)5 SparkSchemaUtil (org.apache.iceberg.spark.SparkSchemaUtil)5 SparkSessionCatalog (org.apache.iceberg.spark.SparkSessionCatalog)5 SparkTable (org.apache.iceberg.spark.source.SparkTable)5 Transform (org.apache.spark.sql.connector.expressions.Transform)5 After (org.junit.After)5 Configuration (org.apache.hadoop.conf.Configuration)4 Table (org.apache.iceberg.Table)4 Set (java.util.Set)3 ConcurrentHashMap (java.util.concurrent.ConcurrentHashMap)3 Executors (java.util.concurrent.Executors)3 AtomicInteger (java.util.concurrent.atomic.AtomicInteger)3