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Example 26 with DecisionTreeClassificationTrainer

use of org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer in project ignite by apache.

the class Step_5_Scaling method main.

/**
 * Run example.
 */
public static void main(String[] args) {
    System.out.println();
    System.out.println(">>> Tutorial step 5 (scaling) example started.");
    try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
        try {
            IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
            // Extracts "pclass", "sibsp", "parch", "sex", "embarked", "age", "fare".
            final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 4, 5, 6, 8, 10).labeled(1);
            Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(// <--- Changed index here.
            6).fit(ignite, dataCache, vectorizer);
            Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
            Preprocessor<Integer, Vector> minMaxScalerPreprocessor = new MinMaxScalerTrainer<Integer, Vector>().fit(ignite, dataCache, imputingPreprocessor);
            Preprocessor<Integer, Vector> normalizationPreprocessor = new NormalizationTrainer<Integer, Vector>().withP(1).fit(ignite, dataCache, minMaxScalerPreprocessor);
            DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer(5, 0);
            // Train decision tree model.
            DecisionTreeModel mdl = trainer.fit(ignite, dataCache, normalizationPreprocessor);
            System.out.println("\n>>> Trained model: " + mdl);
            double accuracy = Evaluator.evaluate(dataCache, mdl, normalizationPreprocessor, new Accuracy<>());
            System.out.println("\n>>> Accuracy " + accuracy);
            System.out.println("\n>>> Test Error " + (1 - accuracy));
            System.out.println(">>> Tutorial step 5 (scaling) example completed.");
        } catch (FileNotFoundException e) {
            e.printStackTrace();
        }
    } finally {
        System.out.flush();
    }
}
Also used : DecisionTreeModel(org.apache.ignite.ml.tree.DecisionTreeModel) FileNotFoundException(java.io.FileNotFoundException) NormalizationTrainer(org.apache.ignite.ml.preprocessing.normalization.NormalizationTrainer) DecisionTreeClassificationTrainer(org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer) Ignite(org.apache.ignite.Ignite) EncoderTrainer(org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer) Vector(org.apache.ignite.ml.math.primitives.vector.Vector)

Example 27 with DecisionTreeClassificationTrainer

use of org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer in project ignite by apache.

the class EncoderExampleWithNormalization method main.

/**
 * Run example.
 */
public static void main(String[] args) {
    System.out.println();
    System.out.println(">>> Train Decision Tree model on mushrooms.csv dataset.");
    try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
        try {
            IgniteCache<Integer, Object[]> dataCache = new SandboxMLCache(ignite).fillObjectCacheWithDoubleLabels(MLSandboxDatasets.MUSHROOMS);
            final Vectorizer<Integer, Object[], Integer, Object> vectorizer = new ObjectArrayVectorizer<Integer>(1, 2, 3).labeled(0);
            Preprocessor<Integer, Object[]> encoderPreprocessor = new EncoderTrainer<Integer, Object[]>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(0).withEncodedFeature(1).withEncodedFeature(2).fit(ignite, dataCache, vectorizer);
            // Defines second preprocessor that normalizes features.
            Preprocessor<Integer, Object[]> normalizer = new NormalizationTrainer<Integer, Object[]>().withP(1).fit(ignite, dataCache, encoderPreprocessor);
            DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer(5, 0);
            // Train decision tree model.
            DecisionTreeModel mdl = trainer.fit(ignite, dataCache, normalizer);
            System.out.println("\n>>> Trained model: " + mdl);
            double accuracy = Evaluator.evaluate(dataCache, mdl, normalizer, new Accuracy<>());
            System.out.println("\n>>> Accuracy " + accuracy);
            System.out.println("\n>>> Test Error " + (1 - accuracy));
            System.out.println(">>> Tutorial step 3 (categorial with One-hot encoder) example started.");
        } catch (FileNotFoundException e) {
            e.printStackTrace();
        }
    } finally {
        System.out.flush();
    }
}
Also used : SandboxMLCache(org.apache.ignite.examples.ml.util.SandboxMLCache) DecisionTreeModel(org.apache.ignite.ml.tree.DecisionTreeModel) FileNotFoundException(java.io.FileNotFoundException) NormalizationTrainer(org.apache.ignite.ml.preprocessing.normalization.NormalizationTrainer) DecisionTreeClassificationTrainer(org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer) Ignite(org.apache.ignite.Ignite)

Example 28 with DecisionTreeClassificationTrainer

use of org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer in project ignite by apache.

the class DecisionTreeClassificationTrainerSQLTableExample method main.

/**
 * Run example.
 */
public static void main(String[] args) throws IgniteCheckedException, IOException {
    System.out.println(">>> Decision tree classification trainer example started.");
    // Start ignite grid.
    try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
        System.out.println(">>> Ignite grid started.");
        // Dummy cache is required to perform SQL queries.
        CacheConfiguration<?, ?> cacheCfg = new CacheConfiguration<>(DUMMY_CACHE_NAME).setSqlSchema("PUBLIC");
        IgniteCache<?, ?> cache = null;
        try {
            cache = ignite.getOrCreateCache(cacheCfg);
            System.out.println(">>> Creating table with training data...");
            cache.query(new SqlFieldsQuery("create table titanic_train (\n" + "    passengerid int primary key,\n" + "    pclass int,\n" + "    survived int,\n" + "    name varchar(255),\n" + "    sex varchar(255),\n" + "    age float,\n" + "    sibsp int,\n" + "    parch int,\n" + "    ticket varchar(255),\n" + "    fare float,\n" + "    cabin varchar(255),\n" + "    embarked varchar(255)\n" + ") with \"template=partitioned\";")).getAll();
            System.out.println(">>> Creating table with test data...");
            cache.query(new SqlFieldsQuery("create table titanic_test (\n" + "    passengerid int primary key,\n" + "    pclass int,\n" + "    survived int,\n" + "    name varchar(255),\n" + "    sex varchar(255),\n" + "    age float,\n" + "    sibsp int,\n" + "    parch int,\n" + "    ticket varchar(255),\n" + "    fare float,\n" + "    cabin varchar(255),\n" + "    embarked varchar(255)\n" + ") with \"template=partitioned\";")).getAll();
            loadTitanicDatasets(ignite, cache);
            System.out.println(">>> Prepare trainer...");
            DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer(4, 0);
            System.out.println(">>> Perform training...");
            DecisionTreeModel mdl = trainer.fit(new SqlDatasetBuilder(ignite, "SQL_PUBLIC_TITANIC_TRAIN"), new BinaryObjectVectorizer<>("pclass", "age", "sibsp", "parch", "fare").withFeature("sex", BinaryObjectVectorizer.Mapping.create().map("male", 1.0).defaultValue(0.0)).labeled("survived"));
            System.out.println("Tree is here: " + mdl.toString(true));
            System.out.println(">>> Perform inference...");
            try (QueryCursor<List<?>> cursor = cache.query(new SqlFieldsQuery("select " + "pclass, " + "sex, " + "age, " + "sibsp, " + "parch, " + "fare from titanic_test"))) {
                for (List<?> passenger : cursor) {
                    Vector input = VectorUtils.of(new Double[] { asDouble(passenger.get(0)), "male".equals(passenger.get(1)) ? 1.0 : 0.0, asDouble(passenger.get(2)), asDouble(passenger.get(3)), asDouble(passenger.get(4)), asDouble(passenger.get(5)) });
                    double prediction = mdl.predict(input);
                    System.out.printf("Passenger %s will %s.\n", passenger, prediction == 0 ? "die" : "survive");
                }
            }
            System.out.println(">>> Example completed.");
        } finally {
            cache.query(new SqlFieldsQuery("DROP TABLE titanic_train"));
            cache.query(new SqlFieldsQuery("DROP TABLE titanic_test"));
            cache.destroy();
        }
    } finally {
        System.out.flush();
    }
}
Also used : DecisionTreeModel(org.apache.ignite.ml.tree.DecisionTreeModel) SqlFieldsQuery(org.apache.ignite.cache.query.SqlFieldsQuery) SqlDatasetBuilder(org.apache.ignite.ml.sql.SqlDatasetBuilder) DecisionTreeClassificationTrainer(org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer) Ignite(org.apache.ignite.Ignite) List(java.util.List) Vector(org.apache.ignite.ml.math.primitives.vector.Vector)

Example 29 with DecisionTreeClassificationTrainer

use of org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer in project ignite by apache.

the class Step_8_CV_with_Param_Grid method main.

/**
 * Run example.
 */
public static void main(String[] args) {
    System.out.println();
    System.out.println(">>> Tutorial step 8 (cross-validation with param grid) example started.");
    try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
        try {
            IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
            // Extracts "pclass", "sibsp", "parch", "sex", "embarked", "age", "fare".
            final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 4, 5, 6, 8, 10).labeled(1);
            TrainTestSplit<Integer, Vector> split = new TrainTestDatasetSplitter<Integer, Vector>().split(0.75);
            Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(// <--- Changed index here.
            6).fit(ignite, dataCache, vectorizer);
            Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
            Preprocessor<Integer, Vector> minMaxScalerPreprocessor = new MinMaxScalerTrainer<Integer, Vector>().fit(ignite, dataCache, imputingPreprocessor);
            Preprocessor<Integer, Vector> normalizationPreprocessor = new NormalizationTrainer<Integer, Vector>().withP(1).fit(ignite, dataCache, minMaxScalerPreprocessor);
            // Tune hyper-parameters with K-fold Cross-Validation on the split training set.
            DecisionTreeClassificationTrainer trainerCV = new DecisionTreeClassificationTrainer();
            CrossValidation<DecisionTreeModel, Integer, Vector> scoreCalculator = new CrossValidation<>();
            ParamGrid paramGrid = new ParamGrid().addHyperParam("maxDeep", trainerCV::withMaxDeep, new Double[] { 1.0, 2.0, 3.0, 4.0, 5.0, 10.0 }).addHyperParam("minImpurityDecrease", trainerCV::withMinImpurityDecrease, new Double[] { 0.0, 0.25, 0.5 });
            scoreCalculator.withIgnite(ignite).withUpstreamCache(dataCache).withTrainer(trainerCV).withMetric(MetricName.ACCURACY).withFilter(split.getTrainFilter()).isRunningOnPipeline(false).withPreprocessor(normalizationPreprocessor).withAmountOfFolds(3).withParamGrid(paramGrid);
            CrossValidationResult crossValidationRes = scoreCalculator.tuneHyperParameters();
            System.out.println("Train with maxDeep: " + crossValidationRes.getBest("maxDeep") + " and minImpurityDecrease: " + crossValidationRes.getBest("minImpurityDecrease"));
            DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer().withMaxDeep(crossValidationRes.getBest("maxDeep")).withMinImpurityDecrease(crossValidationRes.getBest("minImpurityDecrease"));
            System.out.println(crossValidationRes);
            System.out.println("Best score: " + Arrays.toString(crossValidationRes.getBestScore()));
            System.out.println("Best hyper params: " + crossValidationRes.getBestHyperParams());
            System.out.println("Best average score: " + crossValidationRes.getBestAvgScore());
            crossValidationRes.getScoringBoard().forEach((hyperParams, score) -> System.out.println("Score " + Arrays.toString(score) + " for hyper params " + hyperParams));
            // Train decision tree model.
            DecisionTreeModel bestMdl = trainer.fit(ignite, dataCache, split.getTrainFilter(), normalizationPreprocessor);
            System.out.println("\n>>> Trained model: " + bestMdl);
            double accuracy = Evaluator.evaluate(dataCache, split.getTestFilter(), bestMdl, normalizationPreprocessor, new Accuracy<>());
            System.out.println("\n>>> Accuracy " + accuracy);
            System.out.println("\n>>> Test Error " + (1 - accuracy));
            System.out.println(">>> Tutorial step 8 (cross-validation with param grid) example completed.");
        } catch (FileNotFoundException e) {
            e.printStackTrace();
        }
    } finally {
        System.out.flush();
    }
}
Also used : DecisionTreeModel(org.apache.ignite.ml.tree.DecisionTreeModel) FileNotFoundException(java.io.FileNotFoundException) NormalizationTrainer(org.apache.ignite.ml.preprocessing.normalization.NormalizationTrainer) ParamGrid(org.apache.ignite.ml.selection.paramgrid.ParamGrid) DecisionTreeClassificationTrainer(org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer) Ignite(org.apache.ignite.Ignite) CrossValidation(org.apache.ignite.ml.selection.cv.CrossValidation) EncoderTrainer(org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer) Vector(org.apache.ignite.ml.math.primitives.vector.Vector) CrossValidationResult(org.apache.ignite.ml.selection.cv.CrossValidationResult)

Example 30 with DecisionTreeClassificationTrainer

use of org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer in project ignite by apache.

the class Step_13_RandomSearch method main.

/**
 * Run example.
 */
public static void main(String[] args) {
    System.out.println();
    System.out.println(">>> Tutorial step 13 (Random Search) example started.");
    try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
        try {
            IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
            // Extracts "pclass", "sibsp", "parch", "sex", "embarked", "age", "fare".
            final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 4, 5, 6, 8, 10).labeled(1);
            TrainTestSplit<Integer, Vector> split = new TrainTestDatasetSplitter<Integer, Vector>().split(0.75);
            Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(6).fit(ignite, dataCache, vectorizer);
            Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
            Preprocessor<Integer, Vector> minMaxScalerPreprocessor = new MinMaxScalerTrainer<Integer, Vector>().fit(ignite, dataCache, imputingPreprocessor);
            NormalizationTrainer<Integer, Vector> normalizationTrainer = new NormalizationTrainer<Integer, Vector>().withP(1);
            Preprocessor<Integer, Vector> normalizationPreprocessor = normalizationTrainer.fit(ignite, dataCache, minMaxScalerPreprocessor);
            // Tune hyperparams with K-fold Cross-Validation on the split training set.
            DecisionTreeClassificationTrainer trainerCV = new DecisionTreeClassificationTrainer();
            CrossValidation<DecisionTreeModel, Integer, Vector> scoreCalculator = new CrossValidation<>();
            ParamGrid paramGrid = new ParamGrid().withParameterSearchStrategy(new RandomStrategy().withMaxTries(10).withSeed(12L)).addHyperParam("p", normalizationTrainer::withP, new Double[] { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0 }).addHyperParam("maxDeep", trainerCV::withMaxDeep, new Double[] { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0 }).addHyperParam("minImpurityDecrease", trainerCV::withMinImpurityDecrease, new Double[] { 0.0, 0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1.0 });
            scoreCalculator.withIgnite(ignite).withUpstreamCache(dataCache).withTrainer(trainerCV).withMetric(MetricName.ACCURACY).withFilter(split.getTrainFilter()).isRunningOnPipeline(false).withPreprocessor(normalizationPreprocessor).withAmountOfFolds(3).withParamGrid(paramGrid);
            CrossValidationResult crossValidationRes = scoreCalculator.tuneHyperParameters();
            System.out.println("Train with maxDeep: " + crossValidationRes.getBest("maxDeep") + " and minImpurityDecrease: " + crossValidationRes.getBest("minImpurityDecrease"));
            DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer().withMaxDeep(crossValidationRes.getBest("maxDeep")).withMinImpurityDecrease(crossValidationRes.getBest("minImpurityDecrease"));
            System.out.println(crossValidationRes);
            System.out.println("Best score: " + Arrays.toString(crossValidationRes.getBestScore()));
            System.out.println("Best hyper params: " + crossValidationRes.getBestHyperParams());
            System.out.println("Best average score: " + crossValidationRes.getBestAvgScore());
            crossValidationRes.getScoringBoard().forEach((hyperParams, score) -> System.out.println("Score " + Arrays.toString(score) + " for hyper params " + hyperParams));
            // Train decision tree model.
            DecisionTreeModel bestMdl = trainer.fit(ignite, dataCache, split.getTrainFilter(), normalizationPreprocessor);
            System.out.println("\n>>> Trained model: " + bestMdl);
            double accuracy = Evaluator.evaluate(dataCache, split.getTestFilter(), bestMdl, normalizationPreprocessor, new Accuracy<>());
            System.out.println("\n>>> Accuracy " + accuracy);
            System.out.println("\n>>> Test Error " + (1 - accuracy));
            System.out.println(">>> Tutorial step 13 (Random Search) example completed.");
        } catch (FileNotFoundException e) {
            e.printStackTrace();
        }
    } finally {
        System.out.flush();
    }
}
Also used : DecisionTreeModel(org.apache.ignite.ml.tree.DecisionTreeModel) FileNotFoundException(java.io.FileNotFoundException) Ignite(org.apache.ignite.Ignite) EncoderTrainer(org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer) Vector(org.apache.ignite.ml.math.primitives.vector.Vector) CrossValidationResult(org.apache.ignite.ml.selection.cv.CrossValidationResult) ParamGrid(org.apache.ignite.ml.selection.paramgrid.ParamGrid) DecisionTreeClassificationTrainer(org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer) RandomStrategy(org.apache.ignite.ml.selection.paramgrid.RandomStrategy) CrossValidation(org.apache.ignite.ml.selection.cv.CrossValidation)

Aggregations

DecisionTreeClassificationTrainer (org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer)31 Ignite (org.apache.ignite.Ignite)28 DecisionTreeModel (org.apache.ignite.ml.tree.DecisionTreeModel)26 FileNotFoundException (java.io.FileNotFoundException)21 Vector (org.apache.ignite.ml.math.primitives.vector.Vector)21 EncoderTrainer (org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer)14 NormalizationTrainer (org.apache.ignite.ml.preprocessing.normalization.NormalizationTrainer)9 CrossValidation (org.apache.ignite.ml.selection.cv.CrossValidation)9 CrossValidationResult (org.apache.ignite.ml.selection.cv.CrossValidationResult)7 ParamGrid (org.apache.ignite.ml.selection.paramgrid.ParamGrid)7 SandboxMLCache (org.apache.ignite.examples.ml.util.SandboxMLCache)5 CacheConfiguration (org.apache.ignite.configuration.CacheConfiguration)4 LabeledVector (org.apache.ignite.ml.structures.LabeledVector)4 HashMap (java.util.HashMap)3 Random (java.util.Random)3 RendezvousAffinityFunction (org.apache.ignite.cache.affinity.rendezvous.RendezvousAffinityFunction)3 LabeledDummyVectorizer (org.apache.ignite.ml.dataset.feature.extractor.impl.LabeledDummyVectorizer)3 MinMaxScalerTrainer (org.apache.ignite.ml.preprocessing.minmaxscaling.MinMaxScalerTrainer)3 Test (org.junit.Test)3 List (java.util.List)2