use of org.apache.spark.sql.types.StructField in project incubator-systemml by apache.
the class MLContextTest method testDataFrameSumPYDMLVectorWithIDColumn.
@Test
public void testDataFrameSumPYDMLVectorWithIDColumn() {
System.out.println("MLContextTest - DataFrame sum PYDML, vector with ID column");
List<Tuple2<Double, Vector>> list = new ArrayList<Tuple2<Double, Vector>>();
list.add(new Tuple2<Double, Vector>(1.0, Vectors.dense(1.0, 2.0, 3.0)));
list.add(new Tuple2<Double, Vector>(2.0, Vectors.dense(4.0, 5.0, 6.0)));
list.add(new Tuple2<Double, Vector>(3.0, Vectors.dense(7.0, 8.0, 9.0)));
JavaRDD<Tuple2<Double, Vector>> javaRddTuple = sc.parallelize(list);
JavaRDD<Row> javaRddRow = javaRddTuple.map(new DoubleVectorRow());
List<StructField> fields = new ArrayList<StructField>();
fields.add(DataTypes.createStructField(RDDConverterUtils.DF_ID_COLUMN, DataTypes.DoubleType, true));
fields.add(DataTypes.createStructField("C1", new VectorUDT(), true));
StructType schema = DataTypes.createStructType(fields);
Dataset<Row> dataFrame = spark.createDataFrame(javaRddRow, schema);
MatrixMetadata mm = new MatrixMetadata(MatrixFormat.DF_VECTOR_WITH_INDEX);
Script script = pydml("print('sum: ' + sum(M))").in("M", dataFrame, mm);
setExpectedStdOut("sum: 45.0");
ml.execute(script);
}
use of org.apache.spark.sql.types.StructField in project incubator-systemml by apache.
the class MLContextTest method testDataFrameSumDMLMllibVectorWithNoIDColumn.
@Test
public void testDataFrameSumDMLMllibVectorWithNoIDColumn() {
System.out.println("MLContextTest - DataFrame sum DML, mllib vector with no ID column");
List<org.apache.spark.mllib.linalg.Vector> list = new ArrayList<org.apache.spark.mllib.linalg.Vector>();
list.add(org.apache.spark.mllib.linalg.Vectors.dense(1.0, 2.0, 3.0));
list.add(org.apache.spark.mllib.linalg.Vectors.dense(4.0, 5.0, 6.0));
list.add(org.apache.spark.mllib.linalg.Vectors.dense(7.0, 8.0, 9.0));
JavaRDD<org.apache.spark.mllib.linalg.Vector> javaRddVector = sc.parallelize(list);
JavaRDD<Row> javaRddRow = javaRddVector.map(new MllibVectorRow());
List<StructField> fields = new ArrayList<StructField>();
fields.add(DataTypes.createStructField("C1", new org.apache.spark.mllib.linalg.VectorUDT(), true));
StructType schema = DataTypes.createStructType(fields);
Dataset<Row> dataFrame = spark.createDataFrame(javaRddRow, schema);
MatrixMetadata mm = new MatrixMetadata(MatrixFormat.DF_VECTOR);
Script script = dml("print('sum: ' + sum(M));").in("M", dataFrame, mm);
setExpectedStdOut("sum: 45.0");
ml.execute(script);
}
use of org.apache.spark.sql.types.StructField in project incubator-systemml by apache.
the class MLContextTest method testDataFrameSumPYDMLDoublesWithNoIDColumnNoFormatSpecified.
@Test
public void testDataFrameSumPYDMLDoublesWithNoIDColumnNoFormatSpecified() {
System.out.println("MLContextTest - DataFrame sum PYDML, doubles with no ID column, no format specified");
List<String> list = new ArrayList<String>();
list.add("2,2,2");
list.add("3,3,3");
list.add("4,4,4");
JavaRDD<String> javaRddString = sc.parallelize(list);
JavaRDD<Row> javaRddRow = javaRddString.map(new CommaSeparatedValueStringToDoubleArrayRow());
List<StructField> fields = new ArrayList<StructField>();
fields.add(DataTypes.createStructField("C1", DataTypes.DoubleType, true));
fields.add(DataTypes.createStructField("C2", DataTypes.DoubleType, true));
fields.add(DataTypes.createStructField("C3", DataTypes.DoubleType, true));
StructType schema = DataTypes.createStructType(fields);
Dataset<Row> dataFrame = spark.createDataFrame(javaRddRow, schema);
Script script = pydml("print('sum: ' + sum(M))").in("M", dataFrame);
setExpectedStdOut("sum: 27.0");
ml.execute(script);
}
use of org.apache.spark.sql.types.StructField in project incubator-systemml by apache.
the class MLContextTest method testDataFrameSumPYDMLDoublesWithIDColumn.
@Test
public void testDataFrameSumPYDMLDoublesWithIDColumn() {
System.out.println("MLContextTest - DataFrame sum PYDML, doubles with ID column");
List<String> list = new ArrayList<String>();
list.add("1,1,2,3");
list.add("2,4,5,6");
list.add("3,7,8,9");
JavaRDD<String> javaRddString = sc.parallelize(list);
JavaRDD<Row> javaRddRow = javaRddString.map(new CommaSeparatedValueStringToDoubleArrayRow());
List<StructField> fields = new ArrayList<StructField>();
fields.add(DataTypes.createStructField(RDDConverterUtils.DF_ID_COLUMN, DataTypes.DoubleType, true));
fields.add(DataTypes.createStructField("C1", DataTypes.DoubleType, true));
fields.add(DataTypes.createStructField("C2", DataTypes.DoubleType, true));
fields.add(DataTypes.createStructField("C3", DataTypes.DoubleType, true));
StructType schema = DataTypes.createStructType(fields);
Dataset<Row> dataFrame = spark.createDataFrame(javaRddRow, schema);
MatrixMetadata mm = new MatrixMetadata(MatrixFormat.DF_DOUBLES_WITH_INDEX);
Script script = pydml("print('sum: ' + sum(M))").in("M", dataFrame, mm);
setExpectedStdOut("sum: 45.0");
ml.execute(script);
}
use of org.apache.spark.sql.types.StructField in project incubator-systemml by apache.
the class MLContextTest method testOutputDataFrameOfVectorsDML.
@Test
public void testOutputDataFrameOfVectorsDML() {
System.out.println("MLContextTest - output DataFrame of vectors DML");
String s = "m=matrix('1 2 3 4',rows=2,cols=2);";
Script script = dml(s).out("m");
MLResults results = ml.execute(script);
Dataset<Row> df = results.getDataFrame("m", true);
Dataset<Row> sortedDF = df.sort(RDDConverterUtils.DF_ID_COLUMN);
// verify column types
StructType schema = sortedDF.schema();
StructField[] fields = schema.fields();
StructField idColumn = fields[0];
StructField vectorColumn = fields[1];
Assert.assertTrue(idColumn.dataType() instanceof DoubleType);
Assert.assertTrue(vectorColumn.dataType() instanceof VectorUDT);
List<Row> list = sortedDF.collectAsList();
Row row1 = list.get(0);
Assert.assertEquals(1.0, row1.getDouble(0), 0.0);
Vector v1 = (DenseVector) row1.get(1);
double[] arr1 = v1.toArray();
Assert.assertArrayEquals(new double[] { 1.0, 2.0 }, arr1, 0.0);
Row row2 = list.get(1);
Assert.assertEquals(2.0, row2.getDouble(0), 0.0);
Vector v2 = (DenseVector) row2.get(1);
double[] arr2 = v2.toArray();
Assert.assertArrayEquals(new double[] { 3.0, 4.0 }, arr2, 0.0);
}
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