Examples with ObjectNode org.codehaus.jackson.node.ObjectNode used on opensource projects

Example 36 with ObjectNode

use of org.codehaus.jackson.node.ObjectNode in project eol-globi-data by jhpoelen.

the class NodeFactoryNeo4jTest method datasetWithNamespace.

private DatasetImpl datasetWithNamespace(String namespace) {
    DatasetImpl dataset = new DatasetImpl(namespace, URI.create("some:uri"));
    ObjectNode objectNode = new ObjectMapper().createObjectNode();
    objectNode.put(DatasetConstant.SHOULD_RESOLVE_REFERENCES, false);
    dataset.setConfig(objectNode);
    return dataset;
}

Example 37 with ObjectNode

use of org.codehaus.jackson.node.ObjectNode in project eol-globi-data by jhpoelen.

the class NodeFactoryNeo4jTest method addDatasetToStudy.

@Test
public void addDatasetToStudy() throws NodeFactoryException, IOException {
    StudyImpl study1 = new StudyImpl("my title", "some source", "some doi", "some citation");
    DatasetImpl dataset = new DatasetImpl("some/namespace", URI.create("some:uri"));
    ObjectNode objectNode = new ObjectMapper().createObjectNode();
    objectNode.put(DatasetConstant.SHOULD_RESOLVE_REFERENCES, false);
    dataset.setConfig(objectNode);
    study1.setOriginatingDataset(dataset);
    StudyNode study = getNodeFactory().getOrCreateStudy(study1);
    Dataset origDataset = study.getOriginatingDataset();
    assertThat(origDataset, is(notNullValue()));
    assertThat(origDataset.getArchiveURI().toString(), is("some:uri"));
    assertThat(origDataset.getOrDefault(DatasetConstant.SHOULD_RESOLVE_REFERENCES, "true"), is("false"));
    String expectedConfig = new ObjectMapper().writeValueAsString(objectNode);
    assertThat(new ObjectMapper().writeValueAsString(origDataset.getConfig()), is(expectedConfig));
    Node datasetNode = NodeUtil.getDataSetForStudy(study);
    assertThat(datasetNode.getProperty(DatasetConstant.NAMESPACE), is("some/namespace"));
    assertThat(datasetNode.getProperty("archiveURI"), is("some:uri"));
    assertThat(datasetNode.getProperty(DatasetConstant.SHOULD_RESOLVE_REFERENCES), is("false"));
    StudyImpl otherStudy = new StudyImpl("my other title", "some source", "some doi", "some citation");
    otherStudy.setOriginatingDataset(dataset);
    StudyNode studySameDataset = getNodeFactory().getOrCreateStudy(otherStudy);
    Node datasetNodeOther = NodeUtil.getDataSetForStudy(studySameDataset);
    assertThat(datasetNode.getId(), is(datasetNodeOther.getId()));
}

Example 38 with ObjectNode

use of org.codehaus.jackson.node.ObjectNode in project eol-globi-data by jhpoelen.

the class NodeFactoryNeo4jTest method assertDataset.

private void assertDataset(String citationKey) {
    DatasetImpl dataset = new DatasetImpl("some/namespace", URI.create("some:uri"));
    ObjectNode objectNode = new ObjectMapper().createObjectNode();
    objectNode.put(DatasetConstant.SHOULD_RESOLVE_REFERENCES, false);
    objectNode.put(citationKey, "some citation");
    dataset.setConfig(objectNode);
    Dataset origDataset = getNodeFactory().getOrCreateDataset(dataset);
    assertThat(origDataset, is(notNullValue()));
    assertThat(origDataset.getArchiveURI().toString(), is("some:uri"));
    assertThat(origDataset.getOrDefault(DatasetConstant.SHOULD_RESOLVE_REFERENCES, "true"), is("false"));
    assertThat(origDataset.getOrDefault(DatasetConstant.CITATION, "no citation"), is("some citation"));
    assertThat(origDataset.getOrDefault(DatasetConstant.LAST_SEEN_AT, "1"), is(not("1")));
    Dataset datasetAnother = getNodeFactory().getOrCreateDataset(dataset);
    assertThat(((DatasetNode) datasetAnother).getNodeID(), is(((DatasetNode) origDataset).getNodeID()));
}

Example 39 with ObjectNode

use of org.codehaus.jackson.node.ObjectNode in project eol-globi-data by jhpoelen.

the class LinkerDOITest method createStudyDOIlookupCitationDisabled.

@Test
public void createStudyDOIlookupCitationDisabled() throws NodeFactoryException {
    StudyImpl study1 = new StudyImpl("title", "some source", null, "some citation");
    study1.setExternalId("some:id");
    DatasetImpl originatingDataset = new DatasetImpl("some/namespace", URI.create("some:uri"));
    ObjectNode objectNode = new ObjectMapper().createObjectNode();
    objectNode.put(DatasetConstant.SHOULD_RESOLVE_REFERENCES, false);
    originatingDataset.setConfig(objectNode);
    study1.setOriginatingDataset(originatingDataset);
    Study study = getNodeFactory().getOrCreateStudy(study1);
    assertThat(study.getSource(), is("some source"));
    assertThat(study.getDOI(), is(nullValue()));
    assertThat(study.getCitation(), is("some citation"));
    assertThat(study.getTitle(), is("title"));
    assertThat(study.getExternalId(), is("some:id"));
}

Example 40 with ObjectNode

use of org.codehaus.jackson.node.ObjectNode in project mongo-hadoop by mongodb.

the class TestStandalone method collectionSettings.

private JsonNode collectionSettings() {
    ArrayNode settings = new ArrayNode(JsonNodeFactory.instance);
    ObjectNode node = new ObjectNode(JsonNodeFactory.instance);
    node.put(INPUT_URI, getInputUri().toString());
    ObjectNode dow = new ObjectNode(JsonNodeFactory.instance);
    dow.put("dayOfWeek", "FRIDAY");
    node.put("query", dow);
    node.put(MONGO_SPLITTER_CLASS, SingleMongoSplitter.class.getName());
    node.put(SPLITS_USE_RANGEQUERY, true);
    node.put(INPUT_NOTIMEOUT, true);
    settings.add(node);
    MongoClientURI inputUri3 = authCheck(new MongoClientURIBuilder().collection("mongo_hadoop", "yield_historical.in3")).build();
    node = new ObjectNode(JsonNodeFactory.instance);
    node.put(INPUT_URI, inputUri3.toString());
    node.put(SPLITS_USE_RANGEQUERY, true);
    node.put(INPUT_NOTIMEOUT, true);
    settings.add(node);
    return settings;
}