Examples with ScanRequest org.eclipse.scanning.api.event.scan.ScanRequest used on opensource projects

Example 26 with ScanRequest

use of org.eclipse.scanning.api.event.scan.ScanRequest in project gda-core by openGDA.

the class ScanRequestConverter method mergeSampleMetadata.

private void mergeSampleMetadata(ScanRequest scanRequest, IMappingExperimentBean mappingBean) {
    List<ScanMetadata> scanMetadata = scanRequest.getScanMetadata();
    if (scanMetadata == null)
        return;
    Optional<ScanMetadata> sampleScanMetadataOpt = scanMetadata.stream().filter(metadata -> metadata.getType() == MetadataType.SAMPLE).findFirst();
    if (!sampleScanMetadataOpt.isPresent())
        return;
    ScanMetadata sampleScanMetadata = sampleScanMetadataOpt.get();
    SimpleSampleMetadata sampleMetadata = (SimpleSampleMetadata) mappingBean.getSampleMetadata();
    if (sampleMetadata == null) {
        sampleMetadata = new SimpleSampleMetadata();
        mappingBean.setSampleMetadata(sampleMetadata);
    }
    sampleMetadata.setSampleName((String) sampleScanMetadata.getFieldValue(FIELD_NAME_SAMPLE_NAME));
    sampleMetadata.setDescription((String) sampleScanMetadata.getFieldValue(FIELD_NAME_SAMPLE_DESCRIPTION));
}

Example 27 with ScanRequest

use of org.eclipse.scanning.api.event.scan.ScanRequest in project gda-core by openGDA.

the class SavuProcessingRequestHandlerTest method testSavuProcessingRequest.

@Test
public void testSavuProcessingRequest() throws Exception {
    ProcessingRequestHandler handler = new SavuProcessingRequestHandler();
    URL file1 = new URL("file:/lev1/lev2");
    URL file2 = new URL("file:/lev3/lev4");
    List<URL> paths = new ArrayList<>();
    paths.add(file1);
    paths.add(file2);
    SavuProcessingRequest request = new SavuProcessingRequest.Builder().withValue(paths).build();
    ScanRequest scanRequest = new ScanRequest();
    scanRequest.setProcessingRequest(new ProcessingRequest());
    scanRequest.getProcessingRequest().setRequest(new HashMap<>());
    handler.handle(request, scanRequest);
    Collection<Object> translated = scanRequest.getProcessingRequest().getRequest().get(request.getKey());
    Assert.assertEquals(2, translated.size());
    Assert.assertTrue(translated.contains(file1.getPath()));
    Assert.assertTrue(translated.contains(file2.getPath()));
}

Example 28 with ScanRequest

use of org.eclipse.scanning.api.event.scan.ScanRequest in project gda-core by openGDA.

the class ScanRequestConverterTest method testStageNamesAreSetCorrectly.

@Test
public void testStageNamesAreSetCorrectly() throws Exception {
    // Initially the scan path doesn't have the correct axis names
    assertThat(scanPath.getxAxisName(), is(not(equalTo(X_AXIS_NAME))));
    assertThat(scanPath.getyAxisName(), is(not(equalTo(Y_AXIS_NAME))));
    // Act - they're set according to the MappingStageInfo when the mapping bean is
    // converted to a scan request
    ScanRequest scanRequest = scanRequestConverter.convertToScanRequest(mappingBean);
    // Assert - the axis names are now set to the names of the stage
    assertThat(scanPath.getxAxisName(), is(equalTo(X_AXIS_NAME)));
    assertThat(scanPath.getyAxisName(), is(equalTo(Y_AXIS_NAME)));
    scanRequestConverter.mergeIntoMappingBean(scanRequest, newMappingBean);
}

Example 29 with ScanRequest

use of org.eclipse.scanning.api.event.scan.ScanRequest in project gda-core by openGDA.

the class ScanRequestConverterTest method testSampleMetadataSet.

@Test
public void testSampleMetadataSet() throws Exception {
    // Arrange
    final String sampleName = "testSample";
    final String sampleDescription = "This is a description of the test sample.";
    mappingBean.getSampleMetadata().setSampleName(sampleName);
    mappingBean.getSampleMetadata().setDescription(sampleDescription);
    // Act - convert mapping bean to scan request
    ScanRequest scanRequest = scanRequestConverter.convertToScanRequest(mappingBean);
    // Assert
    List<ScanMetadata> scanMetadataList = scanRequest.getScanMetadata();
    assertEquals(1, scanMetadataList.size());
    ScanMetadata scanMetadata = scanMetadataList.get(0);
    assertEquals(MetadataType.SAMPLE, scanMetadata.getType());
    assertEquals(sampleName, scanMetadata.getFieldValue("name"));
    assertEquals(sampleDescription, scanMetadata.getFieldValue("description"));
    // Act again - merge scan request back into new mapping bean
    scanRequestConverter.mergeIntoMappingBean(scanRequest, newMappingBean);
    // Assert again - check the new mapping bean is the same as the old one
    SimpleSampleMetadata sampleMetadata = newMappingBean.getSampleMetadata();
    assertEquals(sampleName, sampleMetadata.getSampleName());
    assertEquals(sampleDescription, sampleMetadata.getDescription());
}

Example 30 with ScanRequest

use of org.eclipse.scanning.api.event.scan.ScanRequest in project gda-core by openGDA.

the class ScanRequestConverterTest method testProcessingRequestIncludedCorrectly.

@Test
public void testProcessingRequestIncludedCorrectly() throws Exception {
    ConfigWrapper wrapper = new ConfigWrapper();
    String appName = "test";
    String pathToConfig = "/path/to/config";
    wrapper.setAppName(appName);
    wrapper.setPathToConfig(pathToConfig);
    wrapper.setActive(true);
    mappingBean.addProcessingRequest(wrapper);
    // Act - convert mapping bean to scan request
    final ScanRequest scanRequest = scanRequestConverter.convertToScanRequest(mappingBean);
    // Assert
    ProcessingRequest processingRequest = scanRequest.getProcessingRequest();
    testProcessingRequest(appName, pathToConfig, processingRequest);
    // Act again - merge scan request into new mapping bean
    scanRequestConverter.mergeIntoMappingBean(scanRequest, newMappingBean);
    // Assert again - check the new mapping bean is the same as the old one
    ProcessingRequest r = new ProcessingRequest();
    r.setRequest(newMappingBean.getProcessingRequest());
    testProcessingRequest(appName, pathToConfig, r);
}