Examples with ResourceService org.eol.globi.service.ResourceService used on opensource projects

Example 26 with ResourceService

use of org.eol.globi.service.ResourceService in project eol-globi-data by jhpoelen.

the class InteractTypeMapperFactoryImplTest method createAndIgnoreTermWithThrowingOnMapRetrieve.

@Test
public void createAndIgnoreTermWithThrowingOnMapRetrieve() throws TermLookupServiceException, IOException {
    ResourceService resourceService = Mockito.mock(ResourceService.class);
    when(resourceService.retrieve(URI.create("interaction_types_ignored.csv"))).thenReturn(IOUtils.toInputStream("interaction_type_ignored\neats", StandardCharsets.UTF_8)).thenReturn(IOUtils.toInputStream("interaction_type_ignored\neats", StandardCharsets.UTF_8));
    when(resourceService.retrieve(URI.create("interaction_types_mappings.csv"))).thenThrow(new IOException("kaboom!"));
    InteractTypeMapperFactoryImpl interactTypeMapperFactory = new InteractTypeMapperFactoryImpl(resourceService);
    InteractTypeMapper interactTypeMapper = interactTypeMapperFactory.create();
    assertThat(interactTypeMapper.getInteractType("eats"), is(nullValue()));
}

Example 27 with ResourceService

use of org.eol.globi.service.ResourceService in project eol-globi-data by jhpoelen.

the class InteractTypeMapperFactoryImplTest method createAndMapTerm.

@Test
public void createAndMapTerm() throws TermLookupServiceException, IOException {
    ResourceService resourceService = Mockito.mock(ResourceService.class);
    when(resourceService.retrieve(URI.create("interaction_types_ignored.csv"))).thenReturn(IOUtils.toInputStream("interaction_type_ignored\nshouldBeIgnored", StandardCharsets.UTF_8));
    when(resourceService.retrieve(URI.create("interaction_types_mapping.csv"))).thenReturn(IOUtils.toInputStream(getTestMap(), StandardCharsets.UTF_8));
    InteractTypeMapperFactoryImpl interactTypeMapperFactory = new InteractTypeMapperFactoryImpl(resourceService);
    InteractTypeMapper interactTypeMapper = interactTypeMapperFactory.create();
    assertThat(interactTypeMapper.getInteractType("shouldBeMapped"), is(InteractType.INTERACTS_WITH));
}

Example 28 with ResourceService

use of org.eol.globi.service.ResourceService in project eol-globi-data by jhpoelen.

the class InteractTypeMapperFactoryImplTest method createAndMapTermNoIgnore.

@Test
public void createAndMapTermNoIgnore() throws TermLookupServiceException, IOException {
    ResourceService resourceService = Mockito.mock(ResourceService.class);
    when(resourceService.retrieve(URI.create("interaction_types_ignored.csv"))).thenReturn(null).thenReturn(null);
    when(resourceService.retrieve(URI.create("interaction_types_mapping.csv"))).thenReturn(IOUtils.toInputStream(getTestMap(), StandardCharsets.UTF_8));
    InteractTypeMapperFactoryImpl interactTypeMapperFactory = new InteractTypeMapperFactoryImpl(resourceService);
    InteractTypeMapper interactTypeMapper = interactTypeMapperFactory.create();
    assertThat(interactTypeMapper.getInteractType("shouldBeMapped"), is(InteractType.INTERACTS_WITH));
}

Example 29 with ResourceService

use of org.eol.globi.service.ResourceService in project eol-globi-data by jhpoelen.

the class InteractTypeMapperFactoryImplTest method createAndFailedToAccessMappingResource.

@Test
public void createAndFailedToAccessMappingResource() throws TermLookupServiceException, IOException {
    ResourceService resourceService = Mockito.mock(ResourceService.class);
    when(resourceService.retrieve(URI.create("interaction_types_ignored.csv"))).thenReturn(IOUtils.toInputStream("interaction_type_ignored\nshouldBeIgnored", StandardCharsets.UTF_8)).thenReturn(IOUtils.toInputStream("interaction_type_ignored\nshouldBeIgnored", StandardCharsets.UTF_8));
    when(resourceService.retrieve(URI.create("interaction_types_mapping.csv"))).thenReturn(null);
    InteractTypeMapperFactory interactTypeMapperFactory = new InteractTypeMapperFactoryImpl(resourceService);
    InteractTypeMapper interactTypeMapper = interactTypeMapperFactory.create();
    assertTrue(interactTypeMapper.shouldIgnoreInteractionType("shouldBeIgnored"));
}

Example 30 with ResourceService

use of org.eol.globi.service.ResourceService in project eol-globi-data by jhpoelen.

the class InteractTypeMapperFactoryImplTest method createAndNoIgnoreResource.

@Test
public void createAndNoIgnoreResource() throws TermLookupServiceException, IOException {
    ResourceService resourceService = Mockito.mock(ResourceService.class);
    when(resourceService.retrieve(URI.create("interaction_types_ignored.csv"))).thenThrow(new IOException("kaboom!"));
    when(resourceService.retrieve(URI.create("interaction_types_mapping.csv"))).thenThrow(new IOException("kaboom!"));
    InteractTypeMapperFactoryImpl interactTypeMapperFactory = new InteractTypeMapperFactoryImpl(resourceService);
    final InteractTypeMapper interactTypeMapper = interactTypeMapperFactory.create();
    assertNotNull(interactTypeMapper);
}