Examples with NullImportLogger org.eol.globi.tool.NullImportLogger used on opensource projects

Example 16 with NullImportLogger

use of org.eol.globi.tool.NullImportLogger in project eol-globi-data by jhpoelen.

the class TaxonNameEnricherTest method detectHigherOrderTaxa.

@Test
public void detectHigherOrderTaxa() throws StudyImporterException {
    List<String> msgs = new ArrayList<>();
    List<Map<String, String>> received = new ArrayList<>();
    final InteractionListener listener = new TaxonNameEnricher(interaction -> received.add(interaction), new NullImportLogger() {

        @Override
        public void info(LogContext ctx, String message) {
            msgs.add(message);
        }

        @Override
        public void warn(LogContext ctx, String message) {
            msgs.add(message);
        }

        @Override
        public void severe(LogContext ctx, String message) {
            msgs.add(message);
        }
    });
    final TreeMap<String, String> link = new TreeMap<>();
    link.put(SOURCE_TAXON_SPECIES, "Donald duck");
    link.put(DatasetImporterForTSV.INTERACTION_TYPE_ID, InteractType.ATE.getIRI());
    link.put(DATASET_CITATION, "some source ref");
    link.put(REFERENCE_ID, "123");
    link.put(REFERENCE_CITATION, "");
    listener.on(link);
    assertThat(received.size(), is(1));
    Map<String, String> receivedInteraction = received.get(0);
    assertThat(receivedInteraction.get(SOURCE_TAXON_NAME), is("Donald duck"));
}