Examples with Mapping org.exolab.castor.mapping.Mapping used on opensource projects

Example 11 with Mapping

use of org.exolab.castor.mapping.Mapping in project OpenClinica by OpenClinica.

the class DataEndpoint method unmarshallToODMContainer.

private ODMContainer unmarshallToODMContainer(Element odmElement) throws Exception {
    ResourceBundle respage = ResourceBundleProvider.getPageMessagesBundle();
    String xml = node2String(odmElement);
    xml = xml.replaceAll("<ODM>", this.ODM_HEADER_NAMESPACE);
    if (xml == null)
        throw new Exception(respage.getString("unreadable_file"));
    Mapping myMap = new Mapping();
    // InputStream xsdFile = coreResources.getInputStream("ODM1-3-0.xsd");//new File(propertiesPath + File.separator
    // + "ODM1-3-0.xsd");
    // InputStream xsdFile2 = coreResources.getInputStream("ODM1-2-1.xsd");//new File(propertiesPath +
    // File.separator + "ODM1-2-1.xsd");
    InputStream mapInputStream = coreResources.getInputStream("cd_odm_mapping.xml");
    myMap.loadMapping(new InputSource(mapInputStream));
    Unmarshaller um1 = new Unmarshaller(myMap);
    ODMContainer odmContainer = new ODMContainer();
    try {
        LOG.debug(xml);
        // File xsdFileFinal = new File(xsdFile);
        // schemaValidator.validateAgainstSchema(xml, xsdFile);
        // removing schema validation since we are presented with the chicken v egg error problem
        odmContainer = (ODMContainer) um1.unmarshal(new StringReader(xml));
        LOG.debug("Found crf data container for study oid: " + odmContainer.getCrfDataPostImportContainer().getStudyOID());
        LOG.debug("found length of subject list: " + odmContainer.getCrfDataPostImportContainer().getSubjectData().size());
        return odmContainer;
    } catch (Exception me1) {
        // fail against one, try another
        me1.printStackTrace();
        LOG.debug("failed in unmarshaling, trying another version = " + me1.getMessage());
        // }
        throw new Exception();
    }
}

Example 12 with Mapping

use of org.exolab.castor.mapping.Mapping in project camel by apache.

the class AbstractCastorDataFormat method createXMLContext.

protected XMLContext createXMLContext(ClassResolver resolver, ClassLoader contextClassLoader) throws Exception {
    XMLContext xmlContext = new XMLContext();
    if (ObjectHelper.isNotEmpty(getMappingFile())) {
        Mapping xmlMap;
        if (contextClassLoader != null) {
            xmlMap = new Mapping(contextClassLoader);
        } else {
            xmlMap = new Mapping();
        }
        xmlMap.loadMapping(resolver.loadResourceAsURL(getMappingFile()));
        xmlContext.addMapping(xmlMap);
    }
    if (getPackages() != null) {
        xmlContext.addPackages(getPackages());
    }
    if (getClassNames() != null) {
        for (String name : getClassNames()) {
            Class<?> clazz = resolver.resolveClass(name);
            xmlContext.addClass(clazz);
        }
    }
    return xmlContext;
}