Examples with Annotation org.exquery.xquery3.Annotation used on opensource projects

Example 6 with Annotation

use of org.exquery.xquery3.Annotation in project zipkin by openzipkin.

the class V2SpanConverter method convert.

public V1Span convert(Span value) {
    md.parse(value);
    result.clear().traceId(value.traceId()).parentId(value.parentId()).id(value.id()).name(value.name()).debug(value.debug());
    // Don't report timestamp and duration on shared spans (should be server, but not necessarily)
    if (!Boolean.TRUE.equals(value.shared())) {
        result.timestamp(value.timestampAsLong());
        result.duration(value.durationAsLong());
    }
    boolean beginAnnotation = md.startTs != 0L && md.begin != null;
    boolean endAnnotation = md.endTs != 0L && md.end != null;
    Endpoint ep = value.localEndpoint();
    int annotationCount = value.annotations().size();
    if (beginAnnotation) {
        annotationCount++;
        result.addAnnotation(md.startTs, md.begin, ep);
    }
    for (int i = 0, length = value.annotations().size(); i < length; i++) {
        Annotation a = value.annotations().get(i);
        if (beginAnnotation && a.value().equals(md.begin))
            continue;
        if (endAnnotation && a.value().equals(md.end))
            continue;
        result.addAnnotation(a.timestamp(), a.value(), ep);
    }
    if (endAnnotation) {
        annotationCount++;
        result.addAnnotation(md.endTs, md.end, ep);
    }
    for (Map.Entry<String, String> b : value.tags().entrySet()) {
        result.addBinaryAnnotation(b.getKey(), b.getValue(), ep);
    }
    boolean writeLocalComponent = annotationCount == 0 && ep != null && value.tags().isEmpty();
    boolean hasRemoteEndpoint = md.addr != null && value.remoteEndpoint() != null;
    // write an empty "lc" annotation to avoid missing the localEndpoint in an in-process span
    if (writeLocalComponent)
        result.addBinaryAnnotation("lc", "", ep);
    if (hasRemoteEndpoint)
        result.addBinaryAnnotation(md.addr, value.remoteEndpoint());
    return result.build();
}

Example 7 with Annotation

use of org.exquery.xquery3.Annotation in project zipkin-gcp by openzipkin.

the class SpanTranslator method translate.

/**
 * Converts a Zipkin Span into a Stackdriver Trace Span.
 *
 * <p>Ex.
 *
 * <pre>{@code
 * traceSpan = SpanTranslator.translate(TraceSpan.newBuilder(), zipkinSpan).build();
 * }</pre>
 *
 * <p>Note: the result does not set {@link com.google.devtools.cloudtrace.v2.Span.Builder#setName(String)}
 * and it is up to callers to make sure to fill it using the project ID and trace ID.
 *
 * @param spanBuilder the builder (to facilitate re-use)
 * @param zipkinSpan The Zipkin Span.
 * @return A Stackdriver Trace Span.
 */
public static com.google.devtools.cloudtrace.v2.Span.Builder translate(com.google.devtools.cloudtrace.v2.Span.Builder spanBuilder, Span zipkinSpan) {
    boolean logTranslation = LOG.isLoggable(FINE);
    if (logTranslation)
        LOG.log(FINE, ">> translating zipkin span: {0}", zipkinSpan);
    spanBuilder.setSpanId(zipkinSpan.id());
    if (zipkinSpan.parentId() != null) {
        spanBuilder.setParentSpanId(zipkinSpan.parentId());
    }
    // NOTE: opencensus prefixes Send. and Recv. based on Kind. For now we reproduce our V1 behavior
    // of using the span name as the display name as is.
    spanBuilder.setDisplayName(toTruncatableString((zipkinSpan.name() != null && !zipkinSpan.name().isEmpty()) ? zipkinSpan.name() : "unknown"));
    if (zipkinSpan.timestampAsLong() != 0L) {
        spanBuilder.setStartTime(createTimestamp(zipkinSpan.timestampAsLong()));
        if (zipkinSpan.durationAsLong() != 0L) {
            Timestamp endTime = createTimestamp(zipkinSpan.timestampAsLong() + zipkinSpan.durationAsLong());
            spanBuilder.setEndTime(endTime);
        }
    }
    spanBuilder.setAttributes(ATTRIBUTES_EXTRACTOR.extract(zipkinSpan));
    if (!zipkinSpan.annotations().isEmpty()) {
        TimeEvents.Builder events = TimeEvents.newBuilder();
        for (Annotation annotation : zipkinSpan.annotations()) {
            events.addTimeEvent(TimeEvent.newBuilder().setTime(createTimestamp(annotation.timestamp())).setAnnotation(TimeEvent.Annotation.newBuilder().setDescription(toTruncatableString(annotation.value()))));
        }
        spanBuilder.setTimeEvents(events);
    }
    if (logTranslation)
        LOG.log(FINE, "<< translated to stackdriver span: {0}", spanBuilder);
    return spanBuilder;
}

Example 8 with Annotation

use of org.exquery.xquery3.Annotation in project libSBOLj by SynBioDex.

the class AnnotationTest method test_pubConstructors.

@Test
public void test_pubConstructors() throws SBOLValidationException, URISyntaxException {
    Annotation CD_annot = gRNA_b_gene.createAnnotation(new QName(prURI, "protein", "pr"), true);
    assertTrue(gRNA_b_gene.getAnnotation(CD_annot.getQName()).getBooleanValue());
    assertTrue(gRNA_b_gene.getAnnotations().size() == 1);
    assertTrue(CD_annot.isBooleanValue());
    CD_annot.setBooleanValue(false);
    assertFalse(gRNA_b_gene.getAnnotation(CD_annot.getQName()).getBooleanValue());
    gRNA_b_gene.removeAnnotation(CD_annot);
    assertTrue(gRNA_b_gene.getAnnotations().size() == 0);
    // test constructor with double
    CD_annot = gRNA_b_gene.createAnnotation(new QName(prURI, "protein", "pr"), 1.0);
    assertTrue(gRNA_b_gene.getAnnotation(CD_annot.getQName()).getDoubleValue() == 1.0);
    assertTrue(gRNA_b_gene.getAnnotations().size() == 1);
    assertTrue(CD_annot.isDoubleValue());
    CD_annot.setDoubleValue(5.0);
    assertTrue(CD_annot.getDoubleValue() == 5.0);
    gRNA_b_gene.removeAnnotation(CD_annot);
    assertTrue(gRNA_b_gene.getAnnotations().size() == 0);
    // test constructor with int
    CD_annot = gRNA_b_gene.createAnnotation(new QName(prURI, "protein", "pr"), 2);
    assertTrue(gRNA_b_gene.getAnnotation(CD_annot.getQName()).getIntegerValue() == 2);
    assertTrue(gRNA_b_gene.getAnnotations().size() == 1);
    assertTrue(CD_annot.isIntegerValue());
    CD_annot.setIntegerValue(7);
    assertTrue(CD_annot.getIntegerValue() == 7);
    gRNA_b_gene.removeAnnotation(CD_annot);
    assertTrue(gRNA_b_gene.getAnnotations().size() == 0);
    // test constructor with string
    CD_annot = gRNA_b_gene.createAnnotation(new QName(prURI, "protein", "pr"), "protein");
    assertTrue(gRNA_b_gene.getAnnotation(CD_annot.getQName()).getStringValue().equals("protein"));
    assertTrue(gRNA_b_gene.getAnnotations().size() == 1);
    assertTrue(CD_annot.isStringValue());
    CD_annot.setStringValue("notAProtein");
    assertTrue(CD_annot.getStringValue().equals("notAProtein"));
    gRNA_b_gene.removeAnnotation(CD_annot);
    assertTrue(gRNA_b_gene.getAnnotations().size() == 0);
    // test constructor with URI
    CD_annot = gRNA_b_gene.createAnnotation(new QName(prURI, "protein", "pr"), new URI("http://www.sbolstandard.org/protein"));
    assertTrue(gRNA_b_gene.getAnnotation(CD_annot.getQName()).getURIValue().equals(new URI("http://www.sbolstandard.org/protein")));
    assertTrue(gRNA_b_gene.getAnnotations().size() == 1);
    assertTrue(CD_annot.isURIValue());
    CD_annot.setURIValue(new URI("http://www.sbolstandard.org/gene"));
    assertTrue(CD_annot.getURIValue().equals(new URI("http://www.sbolstandard.org/gene")));
    gRNA_b_gene.removeAnnotation(CD_annot);
    assertTrue(gRNA_b_gene.getAnnotations().size() == 0);
}

Example 9 with Annotation

use of org.exquery.xquery3.Annotation in project jaeger-client-java by jaegertracing.

the class ZipkinSenderTest method testAppendSpanWithLogs.

@Test
public void testAppendSpanWithLogs() throws Exception {
    JaegerSpan jaegerSpan = tracer.buildSpan("jaegerSpan-with-logs").start();
    jaegerSpan.log("event");
    // use sorted map for consistent ordering in test
    Map<String, Object> fields = new TreeMap<String, Object>();
    fields.put("event", "structured data");
    fields.put("string", "something");
    fields.put("number", 42);
    fields.put("boolean", true);
    jaegerSpan.log(fields);
    sender.append(jaegerSpan);
    sender.flush();
    List<List<zipkin2.Span>> traces = zipkinRule.getTraces();
    assertEquals(1, traces.size());
    assertEquals(1, traces.get(0).size());
    zipkin2.Span zipkinSpan = traces.get(0).get(0);
    assertEquals(2, zipkinSpan.annotations().size());
    // ignore order by using set
    Set<String> annotationValues = new HashSet<String>();
    for (Annotation annotation : zipkinSpan.annotations()) {
        annotationValues.add(annotation.value());
    }
    Set<String> expectedValues = new HashSet<String>();
    expectedValues.add("event");
    expectedValues.add("{\"boolean\":true,\"event\":\"structured data\",\"number\":42,\"string\":\"something\"}");
    assertEquals("zipkin span should contain matching annotations for span logs", expectedValues, annotationValues);
}

Example 10 with Annotation

use of org.exquery.xquery3.Annotation in project jaeger-client-java by jaegertracing.

the class V2SpanConverterTest method testSpanLogsCreateAnnotations.

@Test
public void testSpanLogsCreateAnnotations() {
    JaegerSpan span = tracer.buildSpan("span-with-logs").start();
    span.log("event");
    // use sorted map for consistent ordering in test
    Map<String, Object> fields = new TreeMap<String, Object>();
    fields.put("event", "structured data");
    fields.put("string", "something");
    fields.put("number", 42);
    fields.put("boolean", true);
    span.log(fields);
    zipkin2.Span zipkinSpan = V2SpanConverter.convertSpan(span);
    List<String> annotationValues = new ArrayList<String>();
    for (Annotation annotation : zipkinSpan.annotations()) {
        annotationValues.add(annotation.value());
    }
    List<String> expectedValues = new ArrayList<String>();
    expectedValues.add("event");
    expectedValues.add("{\"boolean\":true,\"event\":\"structured data\",\"number\":42,\"string\":\"something\"}");
    assertEquals("zipkin span should contain matching annotations for span logs", expectedValues, annotationValues);
}