Examples with Document org.geotoolkit.sml.xml.v100.Document used on opensource projects

Example 71 with Document

use of org.geotoolkit.sml.xml.v100.Document in project mycore by MyCoRe-Org.

the class MCRRestAPIClassifications method showObject.

/**
 *  returns a single classification object
 *
 * @param classID - the classfication id
 * @param format
 *   Possible values are: json | xml (required)
 * @param filter
 * 	 a ';'-separated list of ':'-separated key-value pairs, possible keys are:
 *      - lang - the language of the returned labels, if ommited all labels in all languages will be returned
 *      - root - an id for a category which will be used as root
 *      - nonempty - hide empty categories
 * @param style
 * 	a ';'-separated list of values, possible keys are:
 *   	- 'checkboxtree' - create a json syntax which can be used as input for a dojo checkboxtree;
 *      - 'checked'   - (together with 'checkboxtree') all checkboxed will be checked
 *      - 'jstree' - create a json syntax which can be used as input for a jsTree
 *      - 'opened' - (together with 'jstree') - all nodes will be opened
 *      - 'disabled' - (together with 'jstree') - all nodes will be disabled
 *      - 'selected' - (together with 'jstree') - all nodes will be selected
 * @param request - the HTTPServletRequestObject
 * @param callback - used in JSONP to wrap json result into a Javascript function named by callback parameter
 * @return a Jersey Response object
 * @throws MCRRestAPIException
 */
@GET
// @Path("/id/{value}{format:(\\.[^/]+?)?}")  -> working, but returns empty string instead of default value
@Path("/{classID}")
@Produces({ MediaType.TEXT_XML + ";charset=UTF-8", MediaType.APPLICATION_JSON + ";charset=UTF-8" })
public Response showObject(@Context HttpServletRequest request, @PathParam("classID") String classID, @QueryParam("format") @DefaultValue("xml") String format, @QueryParam("filter") @DefaultValue("") String filter, @QueryParam("style") @DefaultValue("") String style, @QueryParam("callback") @DefaultValue("") String callback) throws MCRRestAPIException {
    MCRRestAPIUtil.checkRestAPIAccess(request, MCRRestAPIACLPermission.READ, "/v1/classifications");
    String rootCateg = null;
    String lang = null;
    boolean filterNonEmpty = false;
    boolean filterNoChildren = false;
    for (String f : filter.split(";")) {
        if (f.startsWith("root:")) {
            rootCateg = f.substring(5);
        }
        if (f.startsWith("lang:")) {
            lang = f.substring(5);
        }
        if (f.startsWith("nonempty")) {
            filterNonEmpty = true;
        }
        if (f.startsWith("nochildren")) {
            filterNoChildren = true;
        }
    }
    if (format == null || classID == null) {
        return Response.serverError().status(Status.BAD_REQUEST).build();
    // TODO response.sendError(HttpServletResponse.SC_NOT_FOUND,
    // "Please specify parameters format and classid.");
    }
    try {
        MCRCategory cl = DAO.getCategory(MCRCategoryID.rootID(classID), -1);
        if (cl == null) {
            throw new MCRRestAPIException(Response.Status.BAD_REQUEST, new MCRRestAPIError(MCRRestAPIError.CODE_NOT_FOUND, "Classification not found.", "There is no classification with the given ID."));
        }
        Document docClass = MCRCategoryTransformer.getMetaDataDocument(cl, false);
        Element eRoot = docClass.getRootElement();
        if (rootCateg != null) {
            XPathExpression<Element> xpe = XPathFactory.instance().compile("//category[@ID='" + rootCateg + "']", Filters.element());
            Element e = xpe.evaluateFirst(docClass);
            if (e != null) {
                eRoot = e;
            } else {
                throw new MCRRestAPIException(Response.Status.BAD_REQUEST, new MCRRestAPIError(MCRRestAPIError.CODE_NOT_FOUND, "Category not found.", "The classfication does not contain a category with the given ID."));
            }
        }
        if (filterNonEmpty) {
            Element eFilter = eRoot;
            if (eFilter.getName().equals("mycoreclass")) {
                eFilter = eFilter.getChild("categories");
            }
            filterNonEmpty(docClass.getRootElement().getAttributeValue("ID"), eFilter);
        }
        if (filterNoChildren) {
            eRoot.removeChildren("category");
        }
        String authHeader = MCRJSONWebTokenUtil.createJWTAuthorizationHeader(MCRJSONWebTokenUtil.retrieveAuthenticationToken(request));
        if (FORMAT_JSON.equals(format)) {
            String json = writeJSON(eRoot, lang, style);
            // eventually: allow Cross Site Requests: .header("Access-Control-Allow-Origin", "*")
            if (callback.length() > 0) {
                return Response.ok(callback + "(" + json + ")").type("application/javascript; charset=UTF-8").build();
            } else {
                return Response.ok(json).type("application/json; charset=UTF-8").header(HEADER_NAME_AUTHORIZATION, authHeader).build();
            }
        }
        if (FORMAT_XML.equals(format)) {
            String xml = writeXML(eRoot, lang);
            return Response.ok(xml).type("application/xml; charset=UTF-8").header(HEADER_NAME_AUTHORIZATION, authHeader).build();
        }
    } catch (Exception e) {
        LogManager.getLogger(this.getClass()).error("Error outputting classification", e);
    // TODO response.sendError(HttpServletResponse.SC_NOT_FOUND, "Error outputting classification");
    }
    return null;
}

Example 72 with Document

use of org.geotoolkit.sml.xml.v100.Document in project mycore by MyCoRe-Org.

the class MCRURNObjectXPathMetadataManager method removeIdentifier.

@Override
public void removeIdentifier(MCRDNBURN identifier, MCRBase obj, String additional) {
    String xpath = getProperties().get("Xpath");
    Document xml = obj.createXML();
    XPathFactory xPathFactory = XPathFactory.instance();
    XPathExpression<Element> xp = xPathFactory.compile(xpath, Filters.element());
    List<Element> elements = xp.evaluate(xml);
    elements.stream().filter(element -> element.getTextTrim().equals(identifier.asString())).forEach(Element::detach);
}

Example 73 with Document

use of org.geotoolkit.sml.xml.v100.Document in project mycore by MyCoRe-Org.

the class MCREditorSubmissionTest method testSubmitSelectOptions.

@Test
public void testSubmitSelectOptions() throws JaxenException, JDOMException, IOException {
    String template = "document[category='a'][category[2]='b'][category[3]='c']";
    MCREditorSession session = new MCREditorSession();
    session.setEditedXML(new Document(new MCRNodeBuilder().buildElement(template, null, null)));
    session.getSubmission().mark2checkResubmission(new MCRBinding("/document/category", true, session.getRootBinding()));
    session.getSubmission().emptyNotResubmittedNodes();
    List<Element> categories = session.getEditedXML().getRootElement().getChildren("category");
    assertEquals(3, categories.size());
    assertEquals("", categories.get(0).getText());
    assertEquals("", categories.get(1).getText());
    assertEquals("", categories.get(2).getText());
    session.getSubmission().mark2checkResubmission(new MCRBinding("/document/category", true, session.getRootBinding()));
    Map<String, String[]> submittedValues = new HashMap<>();
    submittedValues.put("/document/category", new String[] { "c", "d" });
    session.getSubmission().setSubmittedValues(submittedValues);
    session.getSubmission().emptyNotResubmittedNodes();
    categories = session.getEditedXML().getRootElement().getChildren("category");
    assertEquals(3, categories.size());
    assertEquals("c", categories.get(0).getText());
    assertEquals("d", categories.get(1).getText());
    assertEquals("", categories.get(2).getText());
    session.getSubmission().mark2checkResubmission(new MCRBinding("/document/category", true, session.getRootBinding()));
    submittedValues.clear();
    submittedValues.put("/document/category", new String[] { "a", "b", "c", "d" });
    session.getSubmission().setSubmittedValues(submittedValues);
    session.getSubmission().emptyNotResubmittedNodes();
    categories = session.getEditedXML().getRootElement().getChildren("category");
    assertEquals(4, categories.size());
    assertEquals("a", categories.get(0).getText());
    assertEquals("b", categories.get(1).getText());
    assertEquals("c", categories.get(2).getText());
    assertEquals("d", categories.get(3).getText());
}

Example 74 with Document

use of org.geotoolkit.sml.xml.v100.Document in project mycore by MyCoRe-Org.

the class MCRDOIRegistrationService method transformToDatacite.

protected Document transformToDatacite(MCRDigitalObjectIdentifier doi, MCRBase mcrBase) throws MCRPersistentIdentifierException {
    MCRObjectID id = mcrBase.getId();
    MCRBaseContent content = new MCRBaseContent(mcrBase);
    try {
        MCRContent transform = MCRContentTransformerFactory.getTransformer(this.transformer).transform(content);
        Document dataciteDocument = transform.asXML();
        insertDOI(dataciteDocument, doi);
        Schema dataciteSchema = loadDataciteSchema();
        try {
            dataciteSchema.newValidator().validate(new JDOMSource(dataciteDocument));
        } catch (SAXException e) {
            String translatedInformation = MCRTranslation.translate(TRANSLATE_PREFIX + ERR_CODE_1_2);
            throw new MCRPersistentIdentifierException("The document " + id + " does not generate well formed Datacite!", translatedInformation, ERR_CODE_1_2, e);
        }
        return dataciteDocument;
    } catch (IOException | JDOMException | SAXException e) {
        throw new MCRPersistentIdentifierException("Could not transform the content of " + id + " with the transformer " + transformer, e);
    }
}

Example 75 with Document

use of org.geotoolkit.sml.xml.v100.Document in project mycore by MyCoRe-Org.

the class MCRDOIRegistrationService method registerJob.

@Override
public void registerJob(Map<String, String> parameters) throws MCRPersistentIdentifierException {
    MCRDigitalObjectIdentifier doi = getDOIFromJob(parameters);
    String idString = parameters.get(CONTEXT_OBJ);
    MCRObjectID objectID = MCRObjectID.getInstance(idString);
    this.validateJobUserRights(objectID);
    MCRObject object = MCRMetadataManager.retrieveMCRObject(objectID);
    MCRObject mcrBase = MCRMetadataManager.retrieveMCRObject(objectID);
    Document dataciteDocument = transformToDatacite(doi, mcrBase);
    MCRDataciteClient dataciteClient = getDataciteClient();
    dataciteClient.storeMetadata(dataciteDocument);
    URI registeredURI;
    try {
        registeredURI = getRegisteredURI(object);
        dataciteClient.mintDOI(doi, registeredURI);
    } catch (URISyntaxException e) {
        throw new MCRException("Base-URL seems to be invalid!", e);
    }
    List<Map.Entry<String, URI>> entryList = getMediaList((MCRObject) object);
    dataciteClient.setMediaList(doi, entryList);
    this.updateRegistrationDate(objectID, "", new Date());
}