Examples with ColumnDraft org.gephi.io.importer.api.ColumnDraft used on opensource projects

Example 11 with ColumnDraft

use of org.gephi.io.importer.api.ColumnDraft in project gephi by gephi.

the class AbstractProcessor method flushToElementAttributes.

protected void flushToElementAttributes(ContainerUnloader container, ElementDraft elementDraft, Element element) {
    for (ColumnDraft columnDraft : elementDraft.getColumns()) {
        if (elementDraft instanceof EdgeDraft && columnDraft.getId().equalsIgnoreCase("weight")) {
            // Special weight column
            continue;
        }
        Object val = elementDraft.getValue(columnDraft.getId());
        Column column = element.getTable().getColumn(columnDraft.getId());
        if (column == null) {
            // The column might be not present, for cases when it cannot be added due to time representation mismatch, etc
            continue;
        }
        if (column.isReadOnly()) {
            continue;
        }
        Class columnDraftTypeClass = columnDraft.getResolvedTypeClass(container);
        if (!column.getTypeClass().equals(columnDraftTypeClass)) {
            if (!columnsTypeMismatchAlreadyWarned.contains(column)) {
                columnsTypeMismatchAlreadyWarned.add(column);
                String error = NbBundle.getMessage(AbstractProcessor.class, "AbstractProcessor.error.columnTypeMismatch", column.getId(), column.getTypeClass().getSimpleName(), columnDraftTypeClass.getSimpleName());
                report.logIssue(new Issue(error, Issue.Level.SEVERE));
            }
            // Incompatible types!
            continue;
        }
        if (val != null) {
            Object processedNewValue = val;
            Object existingValue = element.getAttribute(columnDraft.getId());
            if (columnDraft.isDynamic() && existingValue != null) {
                if (TimeMap.class.isAssignableFrom(columnDraft.getTypeClass())) {
                    TimeMap existingMap = (TimeMap) existingValue;
                    if (!existingMap.isEmpty()) {
                        TimeMap valMap = (TimeMap) val;
                        TimeMap newMap = (TimeMap) existingMap;
                        Object[] keys = valMap.toKeysArray();
                        Object[] vals = valMap.toValuesArray();
                        for (int i = 0; i < keys.length; i++) {
                            try {
                                newMap.put(keys[i], vals[i]);
                            } catch (IllegalArgumentException e) {
                            // Overlapping intervals, ignore
                            }
                        }
                        processedNewValue = newMap;
                    }
                } else if (TimeSet.class.isAssignableFrom(columnDraft.getTypeClass())) {
                    TimeSet existingTimeSet = (TimeSet) existingValue;
                    processedNewValue = mergeTimeSets(existingTimeSet, (TimeSet) val);
                }
            }
            element.setAttribute(columnDraft.getId(), processedNewValue);
        }
    }
}

Example 12 with ColumnDraft

use of org.gephi.io.importer.api.ColumnDraft in project gephi by gephi.

the class AbstractProcessor method addColumnsToTable.

private void addColumnsToTable(ContainerUnloader container, Table table, Iterable<ColumnDraft> columns) {
    TimeRepresentation timeRepresentation = container.getTimeRepresentation();
    for (ColumnDraft col : columns) {
        if (!table.hasColumn(col.getId())) {
            Class typeClass = col.getResolvedTypeClass(container);
            if (Attributes.isTypeAvailable(typeClass, timeRepresentation)) {
                Object defaultValue = col.getResolvedDefaultValue(container);
                if (defaultValue != null && !typeClass.isAssignableFrom(defaultValue.getClass())) {
                    String error = NbBundle.getMessage(AbstractProcessor.class, "AbstractProcessor.error.columnDefaultValueTypeMismatch", col.getId(), defaultValue.toString(), defaultValue.getClass().getSimpleName(), typeClass.getSimpleName());
                    report.logIssue(new Issue(error, Issue.Level.SEVERE));
                    defaultValue = null;
                }
                table.addColumn(col.getId(), col.getTitle(), typeClass, Origin.DATA, defaultValue, !col.isDynamic());
            } else {
                String error = NbBundle.getMessage(AbstractProcessor.class, "AbstractProcessor.error.unavailableColumnType", typeClass.getSimpleName(), timeRepresentation.name(), col.getId());
                report.logIssue(new Issue(error, Issue.Level.SEVERE));
            }
        }
    }
}

Example 13 with ColumnDraft

use of org.gephi.io.importer.api.ColumnDraft in project gephi by gephi.

the class AbstractProcessor method flushToElementAttributes.

protected void flushToElementAttributes(ElementDraft elementDraft, Element element) {
    for (ColumnDraft col : elementDraft.getColumns()) {
        if (elementDraft instanceof EdgeDraft && col.getId().equals("weight")) {
            continue;
        }
        Object val = elementDraft.getValue(col.getId());
        if (val != null) {
            TimeMap existingMap;
            if (col.isDynamic() && (existingMap = (TimeMap) element.getAttribute(col.getId())) != null && !existingMap.isEmpty()) {
                TimeMap valMap = (TimeMap) val;
                Object[] keys = existingMap.toKeysArray();
                Object[] vals = existingMap.toValuesArray();
                for (int i = 0; i < keys.length; i++) {
                    valMap.put(keys[i], vals[i]);
                }
                element.setAttribute(col.getId(), valMap);
            } else {
                element.setAttribute(col.getId(), val);
            }
        }
    }
}

Example 14 with ColumnDraft

use of org.gephi.io.importer.api.ColumnDraft in project gephi by gephi.

the class ImporterGDF method findEdgeColumns.

private void findEdgeColumns(String line) throws Exception {
    String[] columns = line.split(",");
    edgeColumns = new GDFColumn[columns.length - 2];
    for (int i = 2; i < columns.length; i++) {
        String columnString = columns[i];
        String typeString = "";
        String columnName = "";
        Class type = String.class;
        try {
            typeString = columnString.substring(columnString.lastIndexOf(" ")).trim().toLowerCase();
        } catch (IndexOutOfBoundsException e) {
        }
        try {
            int end = columnString.lastIndexOf(" ");
            if (end != -1) {
                columnName = columnString.substring(0, end).trim().toLowerCase();
            } else {
                columnName = columnString.trim().toLowerCase();
            }
        } catch (IndexOutOfBoundsException e) {
        }
        // Check error
        if (columnName.isEmpty()) {
            report.logIssue(new Issue(NbBundle.getMessage(ImporterGDF.class, "importerGDF_error_dataformat2"), Issue.Level.SEVERE));
            columnName = "default" + i;
        }
        if (typeString.isEmpty()) {
            report.logIssue(new Issue(NbBundle.getMessage(ImporterGDF.class, "importerGDF_error_dataformat6", columnName), Issue.Level.INFO));
            typeString = "varchar";
        }
        // Clean parenthesis
        typeString = typeString.replaceAll("\\([0-9]*\\)", "");
        if (typeString.equals("varchar")) {
            type = String.class;
        } else if (typeString.equals("bool")) {
            type = Boolean.class;
        } else if (typeString.equals("boolean")) {
            type = Boolean.class;
        } else if (typeString.equals("integer")) {
            type = Integer.class;
        } else if (typeString.equals("tinyint")) {
            type = Integer.class;
        } else if (typeString.equals("int")) {
            type = Integer.class;
        } else if (typeString.equals("double")) {
            type = Double.class;
        } else if (typeString.equals("float")) {
            type = Float.class;
        } else {
            report.logIssue(new Issue(NbBundle.getMessage(ImporterGDF.class, "importerGDF_error_dataformat5", typeString), Issue.Level.WARNING));
        }
        if (columnName.equals("color")) {
            edgeColumns[i - 2] = new GDFColumn(GDFColumn.EdgeGuessColumn.COLOR);
            report.log("Edge property found: color");
        } else if (columnName.equals("visible")) {
            edgeColumns[i - 2] = new GDFColumn(GDFColumn.EdgeGuessColumn.VISIBLE);
            report.log("Edge property found: visible");
        } else if (columnName.equals("weight")) {
            edgeColumns[i - 2] = new GDFColumn(GDFColumn.EdgeGuessColumn.WEIGHT);
            report.log("Edge property found: weight");
        } else if (columnName.equals("directed")) {
            edgeColumns[i - 2] = new GDFColumn(GDFColumn.EdgeGuessColumn.DIRECTED);
            report.log("Edge property found: directed");
        } else if (columnName.equals("label")) {
            edgeColumns[i - 2] = new GDFColumn(GDFColumn.EdgeGuessColumn.LABEL);
            report.log("Edge property found: label");
        } else if (columnName.equals("labelvisible")) {
            edgeColumns[i - 2] = new GDFColumn(GDFColumn.EdgeGuessColumn.LABELVISIBLE);
            report.log("Edge property found: labelvisible");
        } else {
            ColumnDraft column = container.getEdgeColumn(columnName);
            if (column == null) {
                column = container.addEdgeColumn(columnName, type);
                edgeColumns[i - 2] = new GDFColumn(column);
                report.log("Edge attribute " + columnName + " (" + type.getSimpleName() + ")");
            } else {
                report.logIssue(new Issue(NbBundle.getMessage(ImporterGDF.class, "importerGDF_error_dataformat9", columnName), Issue.Level.SEVERE));
            }
        }
    }
}

Example 15 with ColumnDraft

use of org.gephi.io.importer.api.ColumnDraft in project gephi by gephi.

the class ImporterGDF method findNodeColumns.

private void findNodeColumns(String line) throws Exception {
    String[] columns = line.split(",");
    nodeColumns = new GDFColumn[columns.length - 1];
    for (int i = 1; i < columns.length; i++) {
        String columnString = columns[i];
        String typeString = "";
        String columnName = "";
        Class type = String.class;
        try {
            typeString = columnString.substring(columnString.lastIndexOf(" ")).trim().toLowerCase();
        } catch (IndexOutOfBoundsException e) {
        }
        try {
            int end = columnString.lastIndexOf(" ");
            if (end != -1) {
                columnName = columnString.substring(0, end).trim().toLowerCase();
            } else {
                columnName = columnString.trim().toLowerCase();
            }
        } catch (IndexOutOfBoundsException e) {
        }
        // Check error
        if (columnName.isEmpty()) {
            report.logIssue(new Issue(NbBundle.getMessage(ImporterGDF.class, "importerGDF_error_dataformat2"), Issue.Level.SEVERE));
            columnName = "default" + i;
        }
        if (typeString.isEmpty()) {
            report.logIssue(new Issue(NbBundle.getMessage(ImporterGDF.class, "importerGDF_error_dataformat6", columnName), Issue.Level.INFO));
            typeString = "varchar";
        }
        // Clean parenthesis
        typeString = typeString.replaceAll("\\([0-9]*\\)", "");
        if (typeString.equals("varchar")) {
            type = String.class;
        } else if (typeString.equals("bool")) {
            type = Boolean.class;
        } else if (typeString.equals("boolean")) {
            type = Boolean.class;
        } else if (typeString.equals("integer")) {
            type = Integer.class;
        } else if (typeString.equals("tinyint")) {
            type = Integer.class;
        } else if (typeString.equals("int")) {
            type = Integer.class;
        } else if (typeString.equals("double")) {
            type = Double.class;
        } else if (typeString.equals("float")) {
            type = Float.class;
        } else {
            report.logIssue(new Issue(NbBundle.getMessage(ImporterGDF.class, "importerGDF_error_dataformat5", typeString), Issue.Level.WARNING));
        }
        if (columnName.equals("x")) {
            nodeColumns[i - 1] = new GDFColumn(GDFColumn.NodeGuessColumn.X);
            report.log("Node property found: x");
        } else if (columnName.equals("y")) {
            nodeColumns[i - 1] = new GDFColumn(GDFColumn.NodeGuessColumn.Y);
            report.log("Node property found: y");
        } else if (columnName.equals("visible")) {
            nodeColumns[i - 1] = new GDFColumn(GDFColumn.NodeGuessColumn.VISIBLE);
            report.log("Node property found: visible");
        } else if (columnName.equals("color")) {
            nodeColumns[i - 1] = new GDFColumn(GDFColumn.NodeGuessColumn.COLOR);
            report.log("Node property found: color");
        } else if (columnName.equals("fixed")) {
            nodeColumns[i - 1] = new GDFColumn(GDFColumn.NodeGuessColumn.FIXED);
            report.log("Node property found: fixed");
        } else if (columnName.equals("style")) {
            nodeColumns[i - 1] = new GDFColumn(GDFColumn.NodeGuessColumn.STYLE);
            report.log("Node property found: style");
        } else if (columnName.equals("width")) {
            nodeColumns[i - 1] = new GDFColumn(GDFColumn.NodeGuessColumn.WIDTH);
            report.log("Node property found: width");
        } else if (columnName.equals("height")) {
            nodeColumns[i - 1] = new GDFColumn(GDFColumn.NodeGuessColumn.HEIGHT);
            report.log("Node property found: height");
        } else if (columnName.equals("label")) {
            nodeColumns[i - 1] = new GDFColumn(GDFColumn.NodeGuessColumn.LABEL);
            report.log("Node property found: label");
        } else if (columnName.equals("labelvisible")) {
            nodeColumns[i - 1] = new GDFColumn(GDFColumn.NodeGuessColumn.LABELVISIBLE);
            report.log("Node property found: labelvisible");
        } else {
            ColumnDraft column = container.getNodeColumn(columnName);
            if (column == null) {
                column = container.addNodeColumn(columnName, type);
                nodeColumns[i - 1] = new GDFColumn(column);
                report.log("Node attribute " + columnName + " (" + type.getSimpleName() + ")");
            } else {
                report.logIssue(new Issue(NbBundle.getMessage(ImporterGDF.class, "importerGDF_error_dataformat8", columnName), Issue.Level.SEVERE));
            }
        }
    }
}