Examples with Annotation org.hl7.fhir.r5.model.Annotation used on opensource projects

Example 91 with Annotation

use of org.hl7.fhir.r5.model.Annotation in project org.hl7.fhir.core by hapifhir.

the class ListRenderer method render.

public boolean render(XhtmlNode x, ResourceWrapper list) throws FHIRFormatError, DefinitionException, IOException {
    if (list.has("title")) {
        x.h2().tx(list.get("title").primitiveValue());
    }
    XhtmlNode t = x.table("clstu");
    XhtmlNode tr = t.tr();
    XhtmlNode td = tr.td();
    if (list.has("date")) {
        td.tx("Date: " + list.get("date").dateTimeValue().toHumanDisplay());
    }
    if (list.has("mode")) {
        td.tx("Mode: " + list.get("mode").primitiveValue());
    }
    if (list.has("status")) {
        td.tx("Status: " + list.get("status").primitiveValue());
    }
    if (list.has("code")) {
        td.tx("Code: " + displayBase(list.get("code")));
    }
    tr = t.tr();
    td = tr.td();
    if (list.has("subject")) {
        td.tx("Subject: ");
        shortForRef(td, list.get("subject"));
    }
    if (list.has("encounter")) {
        td.tx("Encounter: ");
        shortForRef(td, list.get("encounter"));
    }
    if (list.has("source")) {
        td.tx("Source: ");
        shortForRef(td, list.get("encounter"));
    }
    if (list.has("orderedBy")) {
        td.tx("Order: " + displayBase(list.get("orderedBy")));
    }
    // for (Annotation a : list.getNote()) {
    // renderAnnotation(a, x);
    // }
    boolean flag = false;
    boolean deleted = false;
    boolean date = false;
    for (BaseWrapper e : list.children("entry")) {
        flag = flag || e.has("flag");
        deleted = deleted || e.has("deleted");
        date = date || e.has("date");
    }
    t = x.table("grid");
    tr = t.tr().style("backgound-color: #eeeeee");
    tr.td().b().tx("Items");
    if (date) {
        tr.td().tx("Date");
    }
    if (flag) {
        tr.td().tx("Flag");
    }
    if (deleted) {
        tr.td().tx("Deleted");
    }
    for (BaseWrapper e : list.children("entry")) {
        tr = t.tr();
        shortForRef(tr.td(), e.get("item"));
        if (date) {
            tr.td().tx(e.has("date") ? e.get("date").dateTimeValue().toHumanDisplay() : "");
        }
        if (flag) {
            tr.td().tx(e.has("flag") ? displayBase(e.get("flag")) : "");
        }
        if (deleted) {
            tr.td().tx(e.has("deleted") ? e.get("deleted").primitiveValue() : "");
        }
    }
    return false;
}

Example 92 with Annotation

use of org.hl7.fhir.r5.model.Annotation in project nia-patient-switching-standard-adaptor by NHSDigital.

the class ConditionMapper method buildNotes.

private List<Annotation> buildNotes(Optional<RCMRMT030101UK04ObservationStatement> observationStatement, RCMRMT030101UK04LinkSet linkSet) {
    List<Annotation> annotationList = new ArrayList<>();
    observationStatement.ifPresent(observationStatement1 -> observationStatement1.getPertinentInformation().stream().map(RCMRMT030101UK04PertinentInformation02::getPertinentAnnotation).filter(Objects::nonNull).map(RCMRMT030101UK04Annotation::getText).filter(StringUtils::isNotBlank).map(StringType::new).map(Annotation::new).forEach(annotationList::add));
    if (linkSet.hasCode() && linkSet.getCode().getOriginalText() != null) {
        StringType text = new StringType(linkSet.getCode().getOriginalText());
        annotationList.add(new Annotation(text));
    }
    return annotationList;
}

Example 93 with Annotation

use of org.hl7.fhir.r5.model.Annotation in project nia-patient-switching-standard-adaptor by NHSDigital.

the class ConditionMapper method getCondition.

private Condition getCondition(RCMRMT030101UK04EhrExtract ehrExtract, Patient patient, List<Encounter> encounters, RCMRMT030101UK04EhrComposition composition, RCMRMT030101UK04LinkSet linkSet, String practiseCode) {
    String id = linkSet.getId().getRoot();
    Condition condition = (Condition) new Condition().addIdentifier(buildIdentifier(id, practiseCode)).addCategory(generateCategory()).setId(id).setMeta(generateMeta(META_PROFILE));
    buildClinicalStatus(linkSet.getCode()).ifPresentOrElse(condition::setClinicalStatus, () -> {
        condition.setClinicalStatus(ACTIVE);
        condition.addNote(new Annotation(new StringType(DEFAULT_CLINICAL_STATUS)));
    });
    condition.setSubject(new Reference(patient));
    condition.addExtension(buildProblemSignificance(linkSet.getCode()));
    generateAnnotationToMinor(linkSet.getCode()).ifPresent(condition::addNote);
    buildContext(composition, encounters).ifPresent(condition::setContext);
    buildOnsetDateTimeType(linkSet).ifPresent(condition::setOnset);
    buildAbatementDateTimeType(linkSet.getEffectiveTime()).ifPresent(condition::setAbatement);
    buildAssertedDateTimeType(composition).ifPresentOrElse(condition::setAssertedDateElement, () -> condition.setAssertedDateElement(parseToDateTimeType(ehrExtract.getAvailabilityTime().getValue())));
    composition.getParticipant2().stream().findFirst().ifPresent(participant2 -> condition.setAsserter(new Reference(new IdType(ResourceType.Practitioner.name(), participant2.getAgentRef().getId().getRoot()))));
    return condition;
}

Example 94 with Annotation

use of org.hl7.fhir.r5.model.Annotation in project CRD by HL7-DaVinci.

the class CardBuilder method priorAuthCard.

public static Card priorAuthCard(CqlResultsForCard cqlResults, IBaseResource request, FhirComponentsT fhirComponents, String priorAuthId, String patientId, String payerId, String providerId, String applicationFhirPath, FhirResourceRepository fhirResourceRepository) {
    logger.info("Build Prior Auth Card");
    Card card = transform(CardTypes.PRIOR_AUTH, cqlResults, false);
    // create the ClaimResponse
    ClaimResponse claimResponse = Utilities.createClaimResponse(priorAuthId, patientId, payerId, providerId, applicationFhirPath);
    // build the FhirResource and save to the database
    FhirResource fhirResource = new FhirResource();
    fhirResource.setFhirVersion(fhirComponents.getFhirVersion().toString()).setResourceType(claimResponse.fhirType()).setData(fhirComponents.getJsonParser().encodeResourceToString(claimResponse));
    fhirResource.setId(claimResponse.getId());
    fhirResource.setName(claimResponse.getId());
    FhirResource newFhirResource = fhirResourceRepository.save(fhirResource);
    logger.info("stored: " + newFhirResource.getFhirVersion() + "/" + newFhirResource.getResourceType() + "/" + newFhirResource.getId());
    // create the reference to the ClaimResponse
    Reference claimResponseReference = new Reference();
    claimResponseReference.setReference("ClaimResponse/" + claimResponse.getId());
    // add SupportingInfo to the Request
    IBaseResource outputRequest = FhirRequestProcessor.addSupportingInfoToRequest(request, claimResponseReference);
    // add suggestion with ClaimResponse
    Suggestion suggestionWithClaimResponse = createSuggestionWithResource(outputRequest, claimResponse, fhirComponents, "Store the prior authorization in the EHR", true);
    card.addSuggestionsItem(suggestionWithClaimResponse);
    // add suggestion with annotation
    Suggestion suggestionWithAnnotation = createSuggestionWithNote(card, outputRequest, fhirComponents, "Store prior authorization as an annotation to the order", "Add authorization to record", false, CoverageGuidance.PRIOR_AUTH);
    card.addSuggestionsItem(suggestionWithAnnotation);
    card.setSelectionBehavior(Card.SelectionBehaviorEnum.AT_MOST_ONE);
    return card;
}