Examples with Library org.hl7.fhir.r5.model.Library used on opensource projects

Example 16 with Library

use of org.hl7.fhir.r5.model.Library in project cqf-ruler by DBCG.

the class CollectDataProviderIT method testCollectData.

@Test
public void testCollectData() {
    // Create test Measure
    String cql = CqlBuilder.newCqlLibrary("4.0.1").addExpression("Initial Population", "exists([Observation])").build();
    Library lib = Libraries.library(cql);
    Measure m = MeasureBuilder.newCohortMeasure(lib).build();
    this.update(lib);
    this.update(m);
    // Create test data
    Patient john = Patients.john_doe();
    this.create(john);
    Observation obs = newResource(Observation.class).setSubject(new Reference(john));
    this.create(obs);
    Encounter enc = newResource(Encounter.class).setSubject(new Reference(john));
    this.create(enc);
    // Submit it
    Parameters results = collectDataProvider.collectData(new SystemRequestDetails(), m.getIdElement(), "2019-01-01", "2019-12-31", Ids.simple(john), null, null);
    List<ParametersParameterComponent> resources = org.opencds.cqf.ruler.utility.r4.Parameters.getPartsByName(results, "resource");
    assertEquals(1, resources.size());
    assertEquals("Observation", resources.get(0).getResource().fhirType());
    List<ParametersParameterComponent> reports = org.opencds.cqf.ruler.utility.r4.Parameters.getPartsByName(results, "measureReport");
    assertEquals(1, reports.size());
    assertEquals("MeasureReport", reports.get(0).getResource().fhirType());
}

Example 17 with Library

use of org.hl7.fhir.r5.model.Library in project cqf-ruler by DBCG.

the class DataOperationProviderIT method testR4MeasureDataRequirementsOperation.

@Test
public void testR4MeasureDataRequirementsOperation() throws IOException {
    String bundleAsText = stringFromResource("Exm104FhirR4MeasureBundle.json");
    Bundle bundle = (Bundle) getFhirContext().newJsonParser().parseResource(bundleAsText);
    getClient().transaction().withBundle(bundle).execute();
    Parameters params = new Parameters();
    params.addParameter().setName("startPeriod").setValue(new StringType("2019-01-01"));
    params.addParameter().setName("endPeriod").setValue(new StringType("2020-01-01"));
    Library returnLibrary = getClient().operation().onInstance(new IdType("Measure", "measure-EXM104-8.2.000")).named("$data-requirements").withParameters(params).returnResourceType(Library.class).execute();
    assertNotNull(returnLibrary);
}

Example 18 with Library

use of org.hl7.fhir.r5.model.Library in project cqf-ruler by DBCG.

the class DataOperationProviderIT method testR4LibraryDataRequirementsOperation.

@Test
public void testR4LibraryDataRequirementsOperation() throws IOException {
    String bundleAsText = stringFromResource("DataReqLibraryTransactionBundle.json");
    Bundle bundle = (Bundle) getFhirContext().newJsonParser().parseResource(bundleAsText);
    getClient().transaction().withBundle(bundle).execute();
    Parameters params = new Parameters();
    params.addParameter().setName("target").setValue(new StringType("dummy"));
    Library returnLibrary = getClient().operation().onInstance(new IdType("Library", "LibraryEvaluationTest")).named("$data-requirements").withParameters(params).returnResourceType(Library.class).execute();
    assertNotNull(returnLibrary);
}

Example 19 with Library

use of org.hl7.fhir.r5.model.Library in project cqf-ruler by DBCG.

the class DataOperationsProvider method createLibraryManager.

private LibraryManager createLibraryManager(Library library, RequestDetails theRequestDetails) {
    JpaLibraryContentProvider jpaLibraryContentProvider = jpaLibraryContentProviderFactory.create(theRequestDetails);
    Bundle libraryBundle = new Bundle();
    List<Library> listLib = fetchDependencyLibraries(library, theRequestDetails);
    listLib.add(library);
    listLib.forEach(lib -> {
        Bundle.BundleEntryComponent component = new Bundle.BundleEntryComponent();
        component.setResource(lib);
        libraryBundle.addEntry(component);
    });
    LibraryContentProvider bundleLibraryProvider = new BundleFhirLibraryContentProvider(this.getFhirContext(), libraryBundle, adapterFactory, libraryVersionSelector);
    List<LibraryContentProvider> sourceProviders = new ArrayList<>(Arrays.asList(bundleLibraryProvider, jpaLibraryContentProvider));
    return libraryManagerFactory.create(sourceProviders);
}

Example 20 with Library

use of org.hl7.fhir.r5.model.Library in project cqf-ruler by DBCG.

the class DataOperationsProvider method visitLibrary.

private void visitLibrary(Library library, List<Library> queue, Map<String, Library> resources, RequestDetails theRequestDetails) {
    for (RelatedArtifact relatedArtifact : library.getRelatedArtifact()) {
        if (relatedArtifact.getType().equals(RelatedArtifact.RelatedArtifactType.DEPENDSON) && relatedArtifact.hasResource()) {
            // FHIR R4+, resource is defined as a canonical
            String resourceString = relatedArtifact.getResource();
            CanonicalParts parts = Canonicals.getParts(resourceString);
            if (parts.resourceType().equals("Library")) {
                Library lib = search(Library.class, Searches.byCanonical(resourceString), theRequestDetails).firstOrNull();
                if (lib != null) {
                    resources.putIfAbsent(lib.getId(), lib);
                    queue.add(lib);
                }
            }
        }
    }
}