Example 6 with CategoryTableXYDataset
use of org.jfree.data.xy.CategoryTableXYDataset in project hmftools by hartwigmedical.
the class CopyNumberChartsTest method testUpperBoundary.
@Test
public void testUpperBoundary() {
CategoryTableXYDataset dataset = minorAllele(newArrayList(createCopyNumber(0, 5)));
assertEquals(5, dataset.getX(0, 0).doubleValue(), EPSILON);
assertEquals(10, dataset.getY(0, 0).doubleValue(), EPSILON);
dataset = minorAllele(newArrayList(createCopyNumber(0, 6)));
assertEquals(5, dataset.getX(0, 0).doubleValue(), EPSILON);
assertEquals(10, dataset.getY(0, 0).doubleValue(), EPSILON);
}
Also used :
CategoryTableXYDataset(org.jfree.data.xy.CategoryTableXYDataset)
Test(org.junit.Test)
Example 7 with CategoryTableXYDataset
use of org.jfree.data.xy.CategoryTableXYDataset in project hmftools by hartwigmedical.
the class CopyNumberChartsTest method testNegativeMinorBafs.
@Test
public void testNegativeMinorBafs() {
CategoryTableXYDataset dataset = minorAllele(newArrayList(createCopyNumber(1.1, 1)));
assertEquals(-0.1, dataset.getX(0, 0).doubleValue(), EPSILON);
assertEquals(10, dataset.getY(0, 0).doubleValue(), EPSILON);
dataset = minorAllele(newArrayList(createCopyNumber(1.7, 1)));
assertEquals(-0.7, dataset.getX(0, 0).doubleValue(), EPSILON);
assertEquals(10, dataset.getY(0, 0).doubleValue(), EPSILON);
}
Also used :
CategoryTableXYDataset(org.jfree.data.xy.CategoryTableXYDataset)
Test(org.junit.Test)
Aggregations
CategoryTableXYDataset (org.jfree.data.xy.CategoryTableXYDataset)7
NotNull (org.jetbrains.annotations.NotNull)4
Test (org.junit.Test)3
JFreeChart (org.jfree.chart.JFreeChart)2
XYPlot (org.jfree.chart.plot.XYPlot)2
StackedXYBarRenderer (org.jfree.chart.renderer.xy.StackedXYBarRenderer)2
StandardXYBarPainter (org.jfree.chart.renderer.xy.StandardXYBarPainter)2
VisibleForTesting (com.google.common.annotations.VisibleForTesting)1
PurpleCopyNumber (com.hartwig.hmftools.common.purple.copynumber.PurpleCopyNumber)1
PurityAdjustedSomaticVariant (com.hartwig.hmftools.common.variant.PurityAdjustedSomaticVariant)1
