Examples with UnknownEntityException org.molgenis.data.UnknownEntityException used on opensource projects

Example 6 with UnknownEntityException

use of org.molgenis.data.UnknownEntityException in project molgenis by molgenis.

the class DataPersisterImpl method updateEntityTypeFirstPass.

private EntityType updateEntityTypeFirstPass(EntityType entityType) {
    String entityTypeId = entityType.getId();
    EntityType existingEntityType = dataService.findOneById(ENTITY_TYPE_META_DATA, entityTypeId, EntityType.class);
    if (existingEntityType == null) {
        throw new UnknownEntityException(format("Unknown entity type [%s]", entityType.getId()));
    }
    return updateEntityTypeFirstPass(entityType, existingEntityType);
}

Example 7 with UnknownEntityException

use of org.molgenis.data.UnknownEntityException in project molgenis by molgenis.

the class PackageRepositoryValidationDecorator method deleteById.

@Override
public void deleteById(Object id) {
    Package package_ = findOneById(id);
    if (package_ == null) {
        throw new UnknownEntityException(format("Unknown package [%s]", id.toString()));
    }
    packageValidator.validate(package_);
    super.deleteById(id);
}

Example 8 with UnknownEntityException

use of org.molgenis.data.UnknownEntityException in project molgenis by molgenis.

the class FairController method getCatalog.

@GetMapping(produces = TEXT_TURTLE_VALUE, value = "/{catalogID}")
@ResponseBody
@RunAsSystem
public Model getCatalog(@PathVariable("catalogID") String catalogID) {
    String subjectIRI = getBaseUri().pathSegment(catalogID).toUriString();
    Entity subjectEntity = dataService.findOneById("fdp_Catalog", catalogID);
    if (subjectEntity == null) {
        throw new UnknownEntityException(format("Catalog with id [%s] does not exist", catalogID));
    }
    return entityModelWriter.createRdfModel(subjectIRI, subjectEntity);
}

Example 9 with UnknownEntityException

use of org.molgenis.data.UnknownEntityException in project molgenis by molgenis.

the class UntypedTagService method addEntityTag.

@Override
public void addEntityTag(SemanticTag<EntityType, LabeledResource, LabeledResource> tag) {
    Entity entity = findEntity(tag.getSubject());
    if (entity == null) {
        throw new UnknownEntityException("Unknown entity [" + tag.getSubject().getId() + "]");
    }
    ImmutableList<SemanticTag<EntityType, LabeledResource, LabeledResource>> existingTags = ImmutableList.copyOf(getTagsForEntity(tag.getSubject()));
    if (existingTags.contains(tag)) {
        LOG.debug("Tag already present");
        return;
    }
    ImmutableList.Builder<Entity> builder = ImmutableList.builder();
    builder.addAll(entity.getEntities(EntityTypeMetadata.TAGS));
    builder.add(getTagEntity(tag));
    entity.set(EntityTypeMetadata.TAGS, builder.build());
    dataService.update(ENTITY_TYPE_META_DATA, entity);
}