Examples with Row org.molgenis.emx2.Row used on opensource projects

Example 11 with Row

use of org.molgenis.emx2.Row in project BibleMultiConverter by schierlm.

the class USX3 method doImportBook.

@Override
protected ParatextBook doImportBook(File inputFile) throws Exception {
    if (!inputFile.getName().toLowerCase().endsWith(".usx"))
        return null;
    ValidateXML.validateFileBeforeParsing(getSchema(), inputFile);
    JAXBContext ctx = JAXBContext.newInstance(ObjectFactory.class.getPackage().getName());
    XMLInputFactory xif = XMLInputFactory.newFactory();
    XMLStreamReader xsr = xif.createXMLStreamReader(new FileInputStream(inputFile));
    Unmarshaller u = ctx.createUnmarshaller();
    u.setListener(unmarshallerLocationListener);
    unmarshallerLocationListener.setXMLStreamReader(inputFile.getName(), xsr);
    Usx doc = (Usx) u.unmarshal(xsr);
    xsr.close();
    ParatextBook.ParatextID id = ParatextBook.ParatextID.fromIdentifier(doc.getBook().getCode().toUpperCase());
    if (id == null) {
        System.out.println("WARNING: Skipping book with unknown ID: " + doc.getBook().getCode());
        return null;
    }
    ParatextBook result = new ParatextBook(id, doc.getBook().getContent());
    ParatextCharacterContent charContent = null;
    for (Object o : doc.getParaOrTableOrChapter()) {
        if (o instanceof Para) {
            Para para = (Para) o;
            if (BOOK_HEADER_ATTRIBUTE_TAGS.contains(para.getStyle().value())) {
                String value = "";
                for (Object oo : para.getContent()) {
                    if (oo instanceof String) {
                        value += ((String) oo).replaceAll("[ \r\n\t]+", " ");
                    } else {
                        throw new RuntimeException("Unsupported content in attribute: " + oo.getClass());
                    }
                }
                result.getAttributes().put(para.getStyle().value(), value);
                charContent = null;
            } else if (para.getStyle() == ParaStyle.PB) {
                if (charContent == null) {
                    charContent = new ParatextCharacterContent();
                    result.getContent().add(charContent);
                }
                charContent.getContent().add(new ParatextCharacterContent.AutoClosingFormatting(ParatextCharacterContent.AutoClosingFormattingKind.PAGE_BREAK, false));
            } else if (PARA_STYLE_UNSUPPORTED.contains(para.getStyle())) {
                // skip
                charContent = null;
            } else {
                result.getContent().add(new ParatextBook.ParagraphStart(PARA_STYLE_MAP.get(para.getStyle())));
                charContent = null;
                if (!para.getContent().isEmpty()) {
                    charContent = new ParatextCharacterContent();
                    result.getContent().add(charContent);
                    parseCharContent(para.getContent(), charContent);
                }
            }
        } else if (o instanceof Table) {
            Table table = (Table) o;
            for (Row row : table.getRow()) {
                result.getContent().add(new ParatextBook.ParagraphStart(ParatextBook.ParagraphKind.TABLE_ROW));
                for (Object oo : row.getVerseOrCell()) {
                    if (oo instanceof Verse) {
                        Verse verse = (Verse) oo;
                        ParatextCharacterContent.ParatextCharacterContentPart verseStartOrEnd = handleVerse(verse);
                        charContent = new ParatextCharacterContent();
                        result.getContent().add(charContent);
                        charContent.getContent().add(verseStartOrEnd);
                    } else if (oo instanceof Cell) {
                        Cell cell = (Cell) oo;
                        result.getContent().add(new ParatextBook.TableCellStart(cell.getStyle().value()));
                        charContent = new ParatextCharacterContent();
                        result.getContent().add(charContent);
                        parseCharContent(cell.getContent(), charContent);
                    } else {
                        throw new IOException("Unsupported table row element: " + o.getClass().getName());
                    }
                }
            }
            charContent = null;
        } else if (o instanceof Chapter) {
            Chapter chapter = (Chapter) o;
            if (chapter.getSid() != null) {
                // Assume start chapter
                result.getContent().add(new ParatextBook.ChapterStart(new ChapterIdentifier(result.getId(), ((Chapter) o).getNumber().intValue())));
            } else if (chapter.getEid() != null) {
                // Assume end chapter
                ChapterIdentifier location = ChapterIdentifier.fromLocationString(chapter.getEid());
                if (location == null) {
                    throw new IOException("Invalid chapter eid found: " + chapter.getEid());
                }
                result.getContent().add(new ParatextBook.ChapterEnd(location));
            } else {
                throw new IOException("Invalid chapter found, both sid and eid are undefined: " + chapter);
            }
            charContent = null;
        } else if (o instanceof Note) {
            if (charContent == null) {
                charContent = new ParatextCharacterContent();
                result.getContent().add(charContent);
            }
            Note note = (Note) o;
            ParatextCharacterContent.FootnoteXref nx = new ParatextCharacterContent.FootnoteXref(NOTE_STYLE_MAP.get(note.getStyle()), note.getCaller());
            charContent.getContent().add(nx);
            parseCharContent(note.getContent(), nx);
        } else if (o instanceof Sidebar) {
            System.out.println("WARNING: Skipping sidebar (study bible content)");
            charContent = null;
        } else {
            throw new IOException("Unsupported book level element: " + o.getClass().getName());
        }
    }
    return result;
}

Example 12 with Row

use of org.molgenis.emx2.Row in project BibleMultiConverter by schierlm.

the class USX3 method doExportBook.

@Override
protected void doExportBook(ParatextBook book, File outFile) throws Exception {
    ObjectFactory of = new ObjectFactory();
    Usx usx = of.createUsx();
    usx.setVersion("3.0");
    usx.setBook(of.createBook());
    usx.getBook().setStyle("id");
    usx.getBook().setCode(book.getId().getIdentifier());
    usx.getBook().setContent(book.getBibleName());
    for (Map.Entry<String, String> attr : book.getAttributes().entrySet()) {
        Para para = new Para();
        para.setStyle(ParaStyle.fromValue(attr.getKey()));
        para.getContent().add(attr.getValue());
        usx.getParaOrTableOrChapter().add(para);
    }
    book.accept(new ParatextBook.ParatextBookContentVisitor<IOException>() {

        List<Object> currentContent = null;

        Table currentTable = null;

        @Override
        public void visitChapterStart(ChapterIdentifier location) throws IOException {
            Chapter ch = new Chapter();
            ch.setStyle("c");
            ch.setSid(location.toString());
            ch.setNumber(BigInteger.valueOf(location.chapter));
            usx.getParaOrTableOrChapter().add(ch);
            currentContent = null;
            currentTable = null;
        }

        @Override
        public void visitChapterEnd(ChapterIdentifier location) throws IOException {
            Chapter ch = new Chapter();
            ch.setEid(location.toString());
            usx.getParaOrTableOrChapter().add(ch);
            currentContent = null;
            currentTable = null;
        }

        @Override
        public void visitParagraphStart(ParatextBook.ParagraphKind kind) throws IOException {
            if (kind == ParatextBook.ParagraphKind.TABLE_ROW) {
                if (currentTable == null) {
                    currentTable = new Table();
                    usx.getParaOrTableOrChapter().add(currentTable);
                }
                Row row = new Row();
                row.setStyle("tr");
                currentTable.getRow().add(row);
                currentContent = currentTable.getRow().get(currentTable.getRow().size() - 1).getVerseOrCell();
            } else {
                Para para = new Para();
                para.setStyle(PARA_KIND_MAP.get(kind));
                usx.getParaOrTableOrChapter().add(para);
                currentContent = para.getContent();
                currentTable = null;
            }
        }

        @Override
        public void visitTableCellStart(String tag) throws IOException {
            if (currentTable == null) {
                System.out.println("WARNING: Table cell outside of table");
                return;
            }
            Row currentRow = currentTable.getRow().get(currentTable.getRow().size() - 1);
            Cell cell = new Cell();
            cell.setAlign(tag.contains("r") ? CellAlign.END : CellAlign.START);
            cell.setStyle(CellStyle.fromValue(tag));
            currentRow.getVerseOrCell().add(cell);
            currentContent = cell.getContent();
        }

        @Override
        public void visitParatextCharacterContent(ParatextCharacterContent content) throws IOException {
            if (currentContent == null)
                visitParagraphStart(ParatextBook.ParagraphKind.PARAGRAPH_P);
            content.accept(new USX3.USXCharacterContentVisitor(currentContent));
        }
    });
    JAXBContext ctx = JAXBContext.newInstance(ObjectFactory.class.getPackage().getName());
    Marshaller m = ctx.createMarshaller();
    if (!Boolean.getBoolean("biblemulticonverter.skipxmlvalidation"))
        m.setSchema(getSchema());
    m.marshal(usx, new UnifiedScriptureXMLWriter(new FileWriter(outFile), "UTF-8"));
}

Example 13 with Row

use of org.molgenis.emx2.Row in project googleads-java-lib by googleads.

the class Pql method combineResultSets.

/**
 * Combines the first and second result sets, if and only if, the columns of both result sets
 * match.
 *
 * @throws IllegalArgumentException if the columns of the first result set don't match the second
 */
public static ResultSet combineResultSets(ResultSet first, ResultSet second) {
    Function<ColumnType, String> columnTypeToString = new Function<ColumnType, String>() {

        public String apply(ColumnType input) {
            return input.getLabelName();
        }
    };
    List<String> firstColumns = Lists.transform(Lists.newArrayList(first.getColumnTypes()), columnTypeToString);
    List<String> secondColumns = Lists.transform(Lists.newArrayList(second.getColumnTypes()), columnTypeToString);
    if (!firstColumns.equals(secondColumns)) {
        throw new IllegalArgumentException(String.format("First result set columns [%s] do not match second columns [%s]", Joiner.on(",").join(firstColumns), Joiner.on(",").join(secondColumns)));
    }
    List<Row> combinedRows = Lists.newArrayList(first.getRows());
    if (second.getRows() != null) {
        combinedRows.addAll(Lists.newArrayList(second.getRows()));
    }
    ResultSet combinedResultSet = new ResultSet();
    combinedResultSet.getColumnTypes().addAll(first.getColumnTypes());
    combinedResultSet.getRows().addAll(combinedRows);
    return combinedResultSet;
}

Example 14 with Row

use of org.molgenis.emx2.Row in project googleads-java-lib by googleads.

the class Pql method resultSetToStringArrayList.

/**
 * Gets the result set as list of string arrays, which can be transformed to a CSV using {@code
 * CsvFiles} such as
 *
 * <pre>
 * <code>
 * ResultSet combinedResultSet = Pql.combineResultSet(resultSet1, resultSet2);
 * //...
 * combinedResultSet = Pql.combineResultSet(combinedResultSet, resultSet3);
 * CsvFiles.writeCsv(Pql.resultSetToStringArrayList(combinedResultSet), filePath);
 * </code>
 * </pre>
 *
 * @param resultSet the result set to convert to a CSV compatible format
 * @return a list of string arrays representing the result set
 */
public static List<String[]> resultSetToStringArrayList(ResultSet resultSet) {
    List<String[]> stringArrayList = Lists.newArrayList();
    stringArrayList.add(getColumnLabels(resultSet).toArray(new String[] {}));
    if (resultSet.getRows() != null) {
        for (Row row : resultSet.getRows()) {
            try {
                stringArrayList.add(getRowStringValues(row).toArray(new String[] {}));
            } catch (IllegalArgumentException e) {
                throw new IllegalStateException("Cannot convert result set to string array list", e);
            }
        }
    }
    return stringArrayList;
}

Example 15 with Row

use of org.molgenis.emx2.Row in project googleads-java-lib by googleads.

the class Pql method combineResultSets.

/**
 * Combines the first and second result sets, if and only if, the columns of both result sets
 * match.
 *
 * @throws IllegalArgumentException if the columns of the first result set don't match the second
 */
public static ResultSet combineResultSets(ResultSet first, ResultSet second) {
    Function<ColumnType, String> columnTypeToString = new Function<ColumnType, String>() {

        public String apply(ColumnType input) {
            return input.getLabelName();
        }
    };
    List<String> firstColumns = Lists.transform(Lists.newArrayList(first.getColumnTypes()), columnTypeToString);
    List<String> secondColumns = Lists.transform(Lists.newArrayList(second.getColumnTypes()), columnTypeToString);
    if (!firstColumns.equals(secondColumns)) {
        throw new IllegalArgumentException(String.format("First result set columns [%s] do not match second columns [%s]", Joiner.on(",").join(firstColumns), Joiner.on(",").join(secondColumns)));
    }
    List<Row> combinedRows = Lists.newArrayList(first.getRows());
    if (second.getRows() != null) {
        combinedRows.addAll(Lists.newArrayList(second.getRows()));
    }
    ResultSet combinedResultSet = new ResultSet();
    combinedResultSet.getColumnTypes().addAll(first.getColumnTypes());
    combinedResultSet.getRows().addAll(combinedRows);
    return combinedResultSet;
}