Examples with LoincCodeClass org.monarchinitiative.loinc2hpo.util.LoincCodeClass used on opensource projects

Example 11 with LoincCodeClass

use of org.monarchinitiative.loinc2hpo.util.LoincCodeClass in project loinc2hpo by monarch-initiative.

the class LoincLongNameParserTest method testString11.

@Test
public void testString11() {
    String name = "Appearance of Body fluid";
    LoincCodeClass loinc = LoincLongNameParser.parse(name);
    assertEquals("Appearance", loinc.getLoincParameter());
    assertEquals("Body fluid", loinc.getLoincTissue());
    assertEquals("", loinc.getLoincType());
    assertEquals("", loinc.getLoincMethod());
}

Example 12 with LoincCodeClass

use of org.monarchinitiative.loinc2hpo.util.LoincCodeClass in project loinc2hpo by monarch-initiative.

the class LoincLongNameParserTest method testString10.

@Test
public void testString10() {
    String name = "Cholesterol in HDL [Presence] in Serum or Plasma";
    LoincCodeClass loinc = LoincLongNameParser.parse(name);
    assertEquals("Cholesterol in HDL", loinc.getLoincParameter());
    assertEquals("Serum or Plasma", loinc.getLoincTissue());
    assertEquals("Presence", loinc.getLoincType());
    assertEquals("", loinc.getLoincMethod());
}

Example 13 with LoincCodeClass

use of org.monarchinitiative.loinc2hpo.util.LoincCodeClass in project loinc2hpo by monarch-initiative.

the class LoincLongNameParserTest method testString9.

@Test
public void testString9() {
    String name = "Thyrotropin [Units/volume] in Serum or Plasma by Detection limit <= 0.05 mIU/L";
    LoincCodeClass loinc = LoincLongNameParser.parse(name);
    assertEquals("Thyrotropin", loinc.getLoincParameter());
    assertEquals("Serum or Plasma", loinc.getLoincTissue());
    assertEquals("Units/volume", loinc.getLoincType());
    assertEquals("Detection limit <= 0.05 mIU/L", loinc.getLoincMethod());
}

Example 14 with LoincCodeClass

use of org.monarchinitiative.loinc2hpo.util.LoincCodeClass in project loinc2hpo by monarch-initiative.

the class LoincLongNameParserTest method testString6.

@Test
public void testString6() {
    String name = "Fibrosis score";
    LoincCodeClass loinc = LoincLongNameParser.parse(name);
    assertEquals("Fibrosis score", loinc.getLoincParameter());
    assertEquals("", loinc.getLoincTissue());
    assertEquals("", loinc.getLoincType());
    assertEquals("", loinc.getLoincMethod());
}

Example 15 with LoincCodeClass

use of org.monarchinitiative.loinc2hpo.util.LoincCodeClass in project loinc2hpo by monarch-initiative.

the class LoincLongNameParserTest method testString12.

@Test
public void testString12() {
    String name = "Human papilloma virus 16+18+31+33+35+39+45+51+52+56+58+59+68 DNA [Presence] in Cervix by Probe and signal amplification method";
    LoincCodeClass loinc = LoincLongNameParser.parse(name);
    assertEquals("Human papilloma virus 16+18+31+33+35+39+45+51+52+56+58+59+68 DNA", loinc.getLoincParameter());
    assertEquals("Cervix", loinc.getLoincTissue());
    assertEquals("Presence", loinc.getLoincType());
    assertEquals("Probe and signal amplification method", loinc.getLoincMethod());
}